Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03374 and BL02776
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:16
# Commandline: needle
# -asequence dna-align/BSNT_03374___aroH.1.5803.seq
# -bsequence dna-align/BL02776___aroH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03374___aroH-BL02776___aroH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03374___aroH-BL02776___aroH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03374___aroH
# 2: BL02776___aroH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 292/399 (73.2%)
# Similarity: 292/399 (73.2%)
# Gaps: 30/399 ( 7.5%)
# Score: 985.0
#
#
#=======================================
BSNT_03374___ 1 ATGATGATTCGCGGAATTCGCGGAGCAACTACAGTTGAACGGGATACTGA 50
||||||||.|||||.|||||.|||||.||.||..||||.||||||||.||
BL02776___aro 1 ATGATGATGCGCGGTATTCGGGGAGCGACGACCATTGACCGGGATACAGA 50
BSNT_03374___ 51 AGAAGAAATTTTAC--AAAAAACTAAACAGCTGTTAGAGAAAATCATAGA 98
|.||||.| |||| |....||.||.||||||.|.|..|||||.||.||
BL02776___aro 51 AAAAGACA--TTACGGAGCGGACGAAGCAGCTGATCGGAAAAATGATCGA 98
BSNT_03374___ 99 AGAAAATCATAC-AAAACCGGAAGATGTTGTTCAAATGCTT-CTGTCGGC 146
.||||||| .|| .|||||.|||.|.||.||.||.|| ||| .|.||.||
BL02776___aro 99 TGAAAATC-GACTCAAACCTGAACAAGTCGTACAGAT-CTTAATTTCTGC 146
BSNT_03374___ 147 TACACCTGATTTGCACGCTG-TTTTCCCGGCAAAAGCTGTTCGCGAG--- 192
|||..|.|||.|.||||||| ||||||||..|| |.|||..||
BL02776___aro 147 TACTTCCGATATACACGCTGCTTTTCCCGCGAA-----GGTCGTCAGAAC 191
BSNT_03374___ 193 CTTTCA-GGATGGCAGTATGTACCGGTAACATGT--ATGCAGGAAATGGA 239
.|||.| ||.||||||.||||.||.|| ||||| ||||||||||||||
BL02776___aro 192 GTTTGACGGCTGGCAGCATGTGCCCGT--CATGTGCATGCAGGAAATGGA 239
BSNT_03374___ 240 CGT--AACAGGCGGTCTGAAAAAGTGCATAAGAGTCATGATGACCGTCCA 287
.|| |||| |||.||.|||||.|||||.|||||.||||||||.||.||
BL02776___aro 240 TGTTGAACA--CGGCCTTAAAAAATGCATCAGAGTGATGATGACGGTACA 287
BSNT_03374___ 288 GACAGATGTCCCTCAGGATCAGATCAGACATGTATATTTAGAAAAAGCCG 337
|||.|||.|.|..||||||.|..||.|.|||||.|||||.|||||.||.|
BL02776___aro 288 GACGGATATGCGGCAGGATGAAGTCCGCCATGTTTATTTGGAAAATGCAG 337
BSNT_03374___ 338 T--CGTATTGAGGCCCGATTTATCATTGACAAAAAATACTGAATTGTAA 384
| || .|.||.||.|||||||||||||||||||||||||||||||||
BL02776___aro 338 TAACG--CTCAGACCTGATTTATCATTGACAAAAAATACTGAATTGTAA 384
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