Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03369 and BL02773
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:13
# Commandline: needle
# -asequence dna-align/BSNT_03369___trpC.1.5803.seq
# -bsequence dna-align/BL02773___trpC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03369___trpC-BL02773___trpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03369___trpC-BL02773___trpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03369___trpC
# 2: BL02773___trpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 797
# Identity: 520/797 (65.2%)
# Similarity: 520/797 (65.2%)
# Gaps: 82/797 (10.3%)
# Score: 1617.5
#
#
#=======================================
BSNT_03369___ 1 ATGCTTGAAAAAATCATCAAACAAAAGAAAGAAGAAGTGAAAACACTGGT 50
||||| |.||||||..|..||.||||.|.|.|||.|||
BL02773___trp 1 ATGCT--------TAATCAAATTATTGATAGAAAACGAGAAGACA----- 37
BSNT_03369___ 51 TTTGCCGGTAGAGCAGCCTTTCG--AG--------------AAACGTTCA 84
.||...|||.||..||.||| || ||.||.|||
BL02773___trp 38 ---TCCTAAAGATCAAGCTGTCGGAAGATTTAAAACTGCCAAAGCGGTCA 84
BSNT_03369___ 85 TTTAAGGAGGCGCTGGCAAGC------CCGAATCGGTTTATCGGGTTGAT 128
|||||..|.||||| | |||||.||||||.|||..||.||
BL02773___trp 85 TTTAAAAAAGCGCT------CCTTTCTCCGAACCGGTTTGTCGCTTTAAT 128
BSNT_03369___ 129 TGCCGAAGTGAAGAAAGCATCGCCGTCAAAAGGGCTTATTAAAGAGGATT 178
|||.||.|||||.|||||.||.|||||||||||..|.|||.|.||||.||
BL02773___trp 129 TGCGGAGGTGAAAAAAGCTTCTCCGTCAAAAGGCGTGATTCAGGAGGGTT 178
BSNT_03369___ 179 TTGTGCCTGTGCAGATTGCAATAGACTATG---AGGCTGCGAAGGCAGAT 225
|||.|||.||..||||.||||.|.|.||.| ||||| ||.||
BL02773___trp 179 TTGAGCCCGTCAAGATCGCAAAACAATACGAACAGGCT---AAAGC---- 221
BSNT_03369___ 226 GCGATT-----TCCGTTTTAACAGACACCCCGTTTTTTCAAGGGGAAAAC 270
||||| ||.|||.|.|||||.||.||.||||||||||||.|.|||
BL02773___trp 222 -CGATTGTTTGTCTGTTCTGACAGATACACCTTTTTTTCAAGGGAAGAAC 270
BSNT_03369___ 271 AGTTATTTATCAGACGTAAAGCGTGCTGTTTCGATTCCTGTACTTAGAAA 320
||||||||.|||||.||.||.||..|.|||||..|.|||||.||..|.||
BL02773___trp 271 AGTTATTTGTCAGATGTGAAACGCTCGGTTTCCCTGCCTGTGCTGCGCAA 320
BSNT_03369___ 321 AGATTTTATTCTTGATTCTCTTCAAGTAGAGGAATCAAGAA--GAATCGG 368
.||||||||..|||||||..||||.||.||.|||.| |.| |.|||||
BL02773___trp 321 GGATTTTATCATTGATTCCATTCAGGTTGAAGAAGC--GGACCGCATCGG 368
BSNT_03369___ 369 AGCGGATGCCATATTGTTAATCGGCGAGGTGCTTGATCCCTTACACCTTC 418
|||||||||.||..||.|.|||||.||.|.||||||.||...|.|.||..
BL02773___trp 369 AGCGGATGCGATCCTGCTGATCGGTGAAGCGCTTGAACCGCAAAAGCTGT 418
BSNT_03369___ 419 ATGAATTATATCTTGAAGCAGGTGAAAAGGGGATGGACGTGTTAGTGGAG 468
.||||.|.||||...||||.|.||||||.||.|||||.|||.|.||.||.
BL02773___trp 419 TTGAACTCTATCAGCAAGCCGTTGAAAAAGGCATGGATGTGCTCGTCGAA 468
BSNT_03369___ 469 GTTCATGATGCATCAACGCTAGAACAAATATTGAAAGTGTTCACACCCGA 518
||.||||..|.|...|||||.||....||.||.||.||.||.||||||||
BL02773___trp 469 GTACATGGCGAAGAGACGCTTGAGGGCATTTTAAATGTCTTTACACCCGA 518
BSNT_03369___ 519 CATTCTCGGCGTAAATAATCGAAACCTAAAAACGTTTGAAACATCTGTAA 568
.||..||||||||||.||||||||.|||||||..||||||||..|.||
BL02773___trp 519 AATCATCGGCGTAAACAATCGAAATCTAAAAAACTTTGAAACGACCGT-- 566
BSNT_03369___ 569 AGCAGACA----GAACAAATCGCATCTCTCGTTCCGAAAGAATCCTTGCT 614
|.|||| ||.|.|||.||....|||||||||...|...||.|.||
BL02773___trp 567 --CGGACAAACGGAGCGAATGGCGAAACTCGTTCCGCCGGGGACCGTTCT 614
BSNT_03369___ 615 TGTCAGCGAAAGCGGAATCGGTTCTTTAGAACATTTAACATTTGTCAATG 664
..|||||||||||||.|||||....|..|||.|..|.||.|||||.||
BL02773___trp 615 CATCAGCGAAAGCGGCATCGGAAAATCGGAAGACCTGACTTTTGTAAA-- 662
BSNT_03369___ 665 AACAT--GGGGCGCGAGCTGTACTTATCGGTGAATCATTGATGAGACAAA 712
|||.| ||.||.|.|||.||.|||.||||.|||||..||||||||.|.|
BL02773___trp 663 AACGTGCGGAGCCCAAGCCGTGCTTGTCGGCGAATCGCTGATGAGAGAGA 712
BSNT_03369___ 713 CTTCTCAGCGTAAAGCAATCCATGCTTTGTTTGGGGAG------TGA 753
|.||.||||..||.||..||.||||.||.||.||.||| |||
BL02773___trp 713 CGTCACAGCTGAAGGCTGTCTATGCGTTATTCGGAGAGGACGGCTGA 759
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