Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03366 and BL02771
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:12
# Commandline: needle
# -asequence dna-align/BSNT_03366___trpB.1.5803.seq
# -bsequence dna-align/BL02771___trpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03366___trpB-BL02771___trpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03366___trpB-BL02771___trpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03366___trpB
# 2: BL02771___trpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1247
# Identity: 923/1247 (74.0%)
# Similarity: 923/1247 (74.0%)
# Gaps: 64/1247 ( 5.1%)
# Score: 3365.0
#
#
#=======================================
BSNT_03366___ 1 ATGTATCCATATCCGAATGAAATAGGCAGATACGGTGATTTTGGCGGAAA 50
||||||.||||||||||||||..||||||.|..||||||||||||||.||
BL02771___trp 1 ATGTATTCATATCCGAATGAACAAGGCAGGTTTGGTGATTTTGGCGGGAA 50
BSNT_03366___ 51 GTTTGTTCCGGAAACACTCATGCAGCCGTTAGATGAAATAGAAACAGCAT 100
.||.||.||||||||||||||||||||.||.||.|||||.||||.|||.|
BL02771___trp 51 ATTCGTCCCGGAAACACTCATGCAGCCTTTGGAAGAAATCGAAAAAGCGT 100
BSNT_03366___ 101 TTAAACAAATCAAGGATGATCCCGCTTTTCGTGAAGAGTATTAT---AAG 147
||....||.|.||.||.||.||..|.|||| ||.||.||||| |||
BL02771___trp 101 TTCTTGAACTGAAAGACGACCCTTCATTTC---AAAAGGATTATCAAAAG 147
BSNT_03366___ 148 CTGTTAAAGGACTATTCCGGACGGCCGACTGCATTAACATACGCTGATCG 197
||.|||||.|||||.||.||..|||||||.||.||.||.|.|||.|| |.
BL02771___trp 148 CTTTTAAATGACTACTCAGGCAGGCCGACGGCTTTGACGTTCGCAGA-CC 196
BSNT_03366___ 198 AG-TCACTGAATACTTAGGCGGCGCGAAAATCTATTTGAAACGAGAAGAT 246
|| |||||.|..|..|.|||||.|||||.||.||.||.|||.||||||||
BL02771___trp 197 AGCTCACTAAGCAGCTGGGCGGAGCGAAGATTTACTTAAAAAGAGAAGAT 246
BSNT_03366___ 247 TTAAACCATACAGGTTCTCATAAAATCAATAATGCGCTAGGTCAAGCGCT 296
||||||||||||||..|.||.||||||||.|||||.||.||.||.|||||
BL02771___trp 247 TTAAACCATACAGGCGCCCACAAAATCAACAATGCCCTCGGCCAGGCGCT 296
BSNT_03366___ 297 GCTTGCTAAAAAAATGGGCAAAACGAAAATCATTGCTGAAACCGGTGCCG 346
.||.||.||.||||||||.|||||.||..|||||||||||||||||||.|
BL02771___trp 297 CCTGGCCAAGAAAATGGGAAAAACAAAGCTCATTGCTGAAACCGGTGCAG 346
BSNT_03366___ 347 GCCAGCATGGCGTTGCCGCTGCAACAGTTGCAGCCAAATTCGGCTTTTCC 396
|||||||.||.||.||.||.||.||.||.||.||.||.||||||||.||.
BL02771___trp 347 GCCAGCACGGTGTGGCGGCGGCGACTGTCGCCGCGAAGTTCGGCTTATCA 396
BSNT_03366___ 397 TGTACTGTGTTTATGGGTGAAGAGGATGTTGCCCGCCAGTCTCTGAACGT 446
||.|..||.||.|||||.||.||.|||||||||.|.||.||.||||||||
BL02771___trp 397 TGCATCGTCTTCATGGGGGAGGAAGATGTTGCCAGACAATCGCTGAACGT 446
BSNT_03366___ 447 TTTCCGCATGAAGCTTCTT-GGAGCGGAGGTAGTGCCTGTAACAAGCGGA 495
.|||||.||||||| |||| |||||||||||.||.||.||..||||||||
BL02771___trp 447 GTTCCGGATGAAGC-TCTTGGGAGCGGAGGTCGTCCCGGTGTCAAGCGGA 495
BSNT_03366___ 496 AACGGAACATTGAAGGATGCCACAAATGAGGCGATCCGGTACTGGGTTCA 545
|||||.|||||.||.|||||.|||||.||.||||||||.|||||||||||
BL02771___trp 496 AACGGGACATTAAAAGATGCTACAAACGAAGCGATCCGCTACTGGGTTCA 545
BSNT_03366___ 546 GCATTGTGAGGATCACTTTTATATGATTGGATCAGTTGTCGGCCCGCATC 595
||||||..||||.||.|||||.|||||.||.||.||.|||||.|||||||
BL02771___trp 546 GCATTGCCAGGACCATTTTTACATGATCGGTTCCGTCGTCGGGCCGCATC 595
BSNT_03366___ 596 CTTATCCGCAGGTGGTCCGTGAATTTCAAAAAATGATCGGAGAGGAAGCG 645
|.|||||..|..|.|||||.|||||||||...||||||||.||.||.|||
BL02771___trp 596 CGTATCCTTATATCGTCCGCGAATTTCAACGGATGATCGGCGAAGAGGCG 645
BSNT_03366___ 646 AAGGATCAGTTGAAACGTATTG----AAGGCACTCTGCCTGATAAAGTAG 691
||.|..|||||..|.| .|||| ||.|| ||.||.||||||||.|
BL02771___trp 646 AAAGCGCAGTTTTATC-AATTGGAGCAAAGC---CTCCCCGATAAAGTTG 691
BSNT_03366___ 692 TGGCATGTGTAGGCGGAGGAAGCAATGCGATGGGTATGTTTCAG-GCATT 740
|.||.|||||.||.||.||||||||||||||.||.||| ||||| ||
BL02771___trp 692 TCGCCTGTGTCGGAGGCGGAAGCAATGCGATCGGGATG-TTCAGCGC--- 737
BSNT_03366___ 741 TTTAAATGAAGA---TGTTGAACTGATCGGCGCTGAAGCAGCAGGAAAAG 787
.||.|.|||||| |||||||||||||||.|..|||||.||.|||||||
BL02771___trp 738 GTTCATTGAAGAAACTGTTGAACTGATCGGAGTCGAAGCTGCGGGAAAAG 787
BSNT_03366___ 788 GAATTGATACGCCTCTTCATGCCGCCACTATTTCGAAAGGAACCGTAGGG 837
|..||||.||.|||||||||||.|||||.||..|.||.||.||...|||.
BL02771___trp 788 GTGTTGACACACCTCTTCATGCGGCCACGATCACAAAGGGTACAAAAGGC 837
BSNT_03366___ 838 GTTATTCACGGTTCATTGACTTATCTCATTCAGGATGAGTTCGGGCAAAT 887
||.||.||||||||.|||||.||..|.|||||.||.||||.|||.||.||
BL02771___trp 838 GTCATCCACGGTTCTTTGACCTACTTGATTCAAGACGAGTACGGACAGAT 887
BSNT_03366___ 888 TATTGAGCCCTACTCTATTTCAGCCGGTCTCGACTATCCTGGAATCGGTC 937
.||.|||||.||.||.||.||||||||.||.||.|||||.|||.||||.|
BL02771___trp 888 CATCGAGCCTTATTCCATCTCAGCCGGACTTGATTATCCGGGAGTCGGCC 937
BSNT_03366___ 938 CGGAGCATG--CATACTTGCATAAGAGCGGCCGTGTCACTTATGACAGTA 985
|.|||||.| ||| ||| |||.|.|..||.||.|||||.|||||...|.
BL02771___trp 938 CCGAGCACGCCCAT-CTT-CATCAAACAGGGCGCGTCACGTATGAATCTG 985
BSNT_03366___ 986 TCACTGATGAAGAAGCGGTGGATGCATTAAAGCTTTTGTCAGAAAAAGAG 1035
||||.|||||.||||||||....|||||||.|||..||.||||.|..|||
BL02771___trp 986 TCACAGATGATGAAGCGGTCTCGGCATTAAGGCTGCTGACAGAGACTGAG 1035
BSNT_03366___ 1036 GGGATTTTGCCGGCAATCGAATCTGCCCATGCGTTAGCGAAAGCATTCAA 1085
||.|||||||||||.||.|||||.||||||||.||.||.||||||||..|
BL02771___trp 1036 GGCATTTTGCCGGCTATTGAATCCGCCCATGCATTGGCAAAAGCATTTGA 1085
BSNT_03366___ 1086 ACTCGCCAAAGGAATG--GATCGCGGTCAACTCATTCTCGTCTGTTTATC 1133
|.||||.||||.|.|| || |.|...||..|.||||||||||..|.||
BL02771___trp 1086 AATCGCTAAAGAACTGCCGA--GAGAGAAAAGCGTTCTCGTCTGCCTTTC 1133
BSNT_03366___ 1134 AGGACGGGGAGACAAGGATGTCAACACATTAATGAATGTATTGGAAGAAG 1183
|||..||||||||||.||.|||.|.||.||.|||||.||.||||||||||
BL02771___trp 1134 AGGCAGGGGAGACAAAGACGTCCATACCTTGATGAAGGTGTTGGAAGAAG 1183
BSNT_03366___ 1184 AGGTGA---AAGCCCATGTTTAA------------------------ 1203
|||||| ||| |||||.||
BL02771___trp 1184 AGGTGAATCAAG---ATGTTCAATCTGAAAAAACAGCCGTCCGATAA 1227
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