Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03358 and BL02764

See Amino acid alignment / Visit BSNT_03358 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:05
# Commandline: needle
#    -asequence dna-align/BSNT_03358___ypiB.1.5803.seq
#    -bsequence dna-align/BL02764___ypiB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03358___ypiB-BL02764___ypiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03358___ypiB-BL02764___ypiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03358___ypiB
# 2: BL02764___ypiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity:     425/547 (77.7%)
# Similarity:   425/547 (77.7%)
# Gaps:          14/547 ( 2.6%)
# Score: 1629.0
# 
#
#=======================================

BSNT_03358___      1 ATGCAGACCCCTGTTTCTGTCAATGAGAAAAAAGATTTTATCCGTTGGTT     50
                     ||||||||||||||||||||||||||.|||||||||||||||||.|||||
BL02764___ypi      1 ATGCAGACCCCTGTTTCTGTCAATGAAAAAAAAGATTTTATCCGCTGGTT     50

BSNT_03358___     51 TTTAAACCATTATCAGTTAAAGCGCCGAGAGTGCGTTTGGATCTTGAACT    100
                     |.|.||||||||||||.|.||.||..|||||||.||.|||||..||||.|
BL02764___ypi     51 TCTCAACCATTATCAGCTGAAACGAAGAGAGTGTGTATGGATTCTGAATT    100

BSNT_03358___    101 ACTTAATGAGCCATGATTCTCTCATGGAGAAGGTTCATTTTGTGGAGCAG    150
                     |.||||||||||||||.||.||.|||||.||.||.||||||||.||||||
BL02764___ypi    101 ATTTAATGAGCCATGACTCGCTGATGGAAAAAGTGCATTTTGTCGAGCAG    150

BSNT_03358___    151 GCTGAATTTTGCCCGAGAGGCATTATAATGTCAACACATTGTGTTGAAGA    200
                     ||.||||||||.|||||.||||||||.|||||.||.||.||.|||||.||
BL02764___ypi    151 GCCGAATTTTGTCCGAGGGGCATTATCATGTCTACCCACTGCGTTGAGGA    200

BSNT_03358___    201 AGTTCCGTTCCGGTTCTATAAAGAGAATGTCATGACTACCGACGCGGAAA    250
                     |||.||.||.||.||.||||||||.|||||||||||.|||||.||.||||
BL02764___ypi    201 AGTGCCTTTTCGTTTTTATAAAGAAAATGTCATGACGACCGATGCAGAAA    250

BSNT_03358___    251 AATCTTTTCATGATATTAGATTAAATAAACAGCAGGATTTGTTTATCCAG    300
                     ||||.|||||||||||.||..|.|||||.|||||||||.|.|||||||||
BL02764___ypi    251 AATCATTTCATGATATCAGGCTGAATAAGCAGCAGGATCTCTTTATCCAG    300

BSNT_03358___    301 CTTAATTTCCGTTCGGCTTACAGCTCACCTGAATATGCGGCGGTGCTGGA    350
                     ||.||.|||||.||.||.||.|..||.||.|||||||||||.||.||.||
BL02764___ypi    301 CTGAACTTCCGCTCAGCCTATAATTCTCCGGAATATGCGGCTGTACTCGA    350

BSNT_03358___    351 GTCCAACCCGCATATTCCGAAAAACCTTTTTGAGAATAAAAAAGATCAGG    400
                     ..||||.|||||||||||||||.||||.|.|||.|||.||||||||.|  
BL02764___ypi    351 AGCCAATCCGCATATTCCGAAAGACCTATATGAAAATGAAAAAGATAA--    398

BSNT_03358___    401 GATTG--GCGGAACAGATTTTAGAGCACGCTATTTCCACATTCCAAAGAG    448
                     .||||  ||.|||||||||||.|||||..|.|||.||||.||.||.|||.
BL02764___ypi    399 AATTGTCGCTGAACAGATTTTGGAGCATTCCATTGCCACTTTTCAGAGAC    448

BSNT_03358___    449 AAAAATTATTAAAAGACATTGACGACGCGTTAGATCGTCATGATAAAG-A    497
                     ||||..|..|....||.||.|||||.|||.|.||.||.||.||||||| |
BL02764___ypi    449 AAAAGCTGCTGCGGGAAATCGACGAAGCGCTTGACCGCCAGGATAAAGAA    498

BSNT_03358___    498 GGCATTTGAACAATTATCGCGC----CAATTAAATCAGCTCACATAA    540
                     .|| ||.|||.||.||    ||    |||.|.|..|||||...||||
BL02764___ypi    499 AGC-TTCGAAAAACTA----GCTAAACAACTGAGCCAGCTGCGATAA    540


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