Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03357 and BL02763
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence dna-align/BSNT_03357___ypiF.1.5803.seq
# -bsequence dna-align/BL02763___ypiF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03357___ypiF-BL02763___ypiF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03357___ypiF-BL02763___ypiF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03357___ypiF
# 2: BL02763___ypiF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 510
# Identity: 293/510 (57.5%)
# Similarity: 293/510 (57.5%)
# Gaps: 126/510 (24.7%)
# Score: 757.0
#
#
#=======================================
BSNT_03357___ 1 ATGAGGTGGA---GAAT---CACTGATGCCAAGGACTATTTAC----AAG 40
|||.| |||| ||| ||||| ||| |.||||| |.|
BL02763___ypi 1 -----GTGAAATGGAATACGCAC-GATGC---GGA-TGTTTACTTGAACG 40
BSNT_03357___ 41 CTAAGGATTACATTGATACCGCTGTCATACCATTAATTAACATAAGGGTT 90
|.||.||.|||||.|||||.||||||||.||.||| |||..||||
BL02763___ypi 41 CGAAAGAATACATCGATACAGCTGTCATCCCTTTA------ATATCGGTT 84
BSNT_03357___ 91 AAT------AACCATTTTAAAATGGCGGCGGA--GAAAGGCGAGTTTACG 132
.|| .|.||.||||||..||| ||.| .|||||.||.||||||
BL02763___ypi 85 GATCTTGGAGATCAGTTTAAATCGGC--CGTATCAAAAGGGGAATTTACG 132
BSNT_03357___ 133 CAGCTTCTCT-----CAGAAGAACTTGAAAGGCAGTTAAAGGGACGGGTA 177
|||.| ||||||||||.|||||||||.|.|||||..|
BL02763___ypi 133 -----TCTATACTTGCAGAAGAACTCGAAAGGCAGCTGAAGGGCAG---- 173
BSNT_03357___ 178 TATTTAC----TTCCGCCTTATACATATGTTGATAGAA----ATGAAATA 219
.||.||| |||||||.|.||||||| .||||| ||||||.|
BL02763___ypi 174 AATCTACCTGTTTCCGCCCTGTACATAT----TTAGAAGCGGATGAAAAA 219
BSNT_03357___ 220 ACCGTTCAAGGGCTTA---AGGATTTGCGGGAAGAGCTG-----ATAACG 261
.|.|..|| ||.|| ..||||| ..||||..|| |.|||
BL02763___ypi 220 TCGGCGCA---GCATATCGCCGATTT---AAAAGAAATGGCCGAAAAAC- 262
BSNT_03357___ 262 GAATTTCCGCATGTTGTCCTGCTCACAT--------------CTGACGAA 297
||||.||| ||||| |.||.|||
BL02763___ypi 263 --ATTTTCGC-------------CACATCGTTTTTTTAACGACGGATGAA 297
BSNT_03357___ 298 AGTTGGAGAGCTGAGGATGCGTTAG---GCAAAA-----TGATTGTTACA 339
.|.|||| |||.||.|.| ||..|| |||||| ||...|||
BL02763___ypi 298 CGCTGGA-AGCAGATGCT-CGACAGCGAGCAAAAGCTGCTGTGGGTT--- 342
BSNT_03357___ 340 CCGTCTGTTCCATTAGAGCATTTAAATGACTCTTTAAAAAGAAAAA--TA 387
|||.|..||||..|.||.|||.|.||.||.||.|| ||||.|.|| |.
BL02763___ypi 343 CCGGCGATTCCTCTCGAACATATGAAGGATTCGTT--AAAGCAGAAGCTG 390
BSNT_03357___ 388 TTGGATGAACGCACTGCTGAAATTTTGAACGTTTTGTTACAGTTATGGAG 437
.||||.||.|..|.||...||||.||||||.||||||||||.|..||||.
BL02763___ypi 391 CTGGAAGATCAAATTGAGCAAATATTGAACATTTTGTTACAATATTGGAA 440
BSNT_03357___ 438 CACTTCATAA 447
|.|||.|
BL02763___ypi 441 CTCTTGA--- 447
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