Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03356 and BL02762
See
Amino acid alignment /
Visit
BSNT_03356 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence dna-align/BSNT_03356___qcrA.1.5803.seq
# -bsequence dna-align/BL02762___qcrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03356___qcrA-BL02762___qcrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03356___qcrA-BL02762___qcrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03356___qcrA
# 2: BL02762___qcrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 510
# Identity: 418/510 (82.0%)
# Similarity: 418/510 (82.0%)
# Gaps: 9/510 ( 1.8%)
# Score: 1706.0
#
#
#=======================================
BSNT_03356___ 1 ATGGGCGGAAA---ACATGATATATCCAGACGTCAATTTTTGAATTACAC 47
|||.|||.||| ||||....|||||||||||||.|||||.||.||.||
BL02762___qcr 1 ATGAGCGAAAAAAGACATCGGGTATCCAGACGTCAGTTTTTAAACTATAC 50
BSNT_03356___ 48 GCTCACAGGCGTAGGAGGTTTTATGGCGGCTAGTATGCTCATGCCTATGG 97
|||.||.||.||.||.||.|||||||||||..|.||||||||||||||||
BL02762___qcr 51 GCTGACCGGAGTCGGCGGCTTTATGGCGGCGGGGATGCTCATGCCTATGG 100
BSNT_03356___ 98 TTCGCTTCGCACTCGACCCGGTATTAAAATCGACAGGGAAG--CAGGATA 145
||||||||||.|||||.|||||.||||...|||| .|||| |||||.|
BL02762___qcr 101 TTCGCTTCGCGCTCGATCCGGTTTTAAGGCCGAC--TGAAGATCAGGACA 148
BSNT_03356___ 146 TGGTTCAGGTTGTCAGCGTTGATGAGTTGACAAAAGAGCCGCAGCGCTTT 195
|||||||||||||||||||||||||.||||||||.||.|||||||||||.
BL02762___qcr 149 TGGTTCAGGTTGTCAGCGTTGATGAATTGACAAATGAACCGCAGCGCTTC 198
BSNT_03356___ 196 GATTTTAAAATTAATCAAGTCGATGCCTGGTATGAGTCAGAAGAGTCAAG 245
|||||||||||.||.|||||.|||||||||||.||.||.|||||.||.||
BL02762___qcr 199 GATTTTAAAATCAAACAAGTGGATGCCTGGTACGAATCGGAAGAATCGAG 248
BSNT_03356___ 246 ATCAGCCTGGGTCTTCAAAAACGGGGATGAAATTGTAGCACTTTCGCCAA 295
|||.||.|||||.|||||||..|||||.|||||||||||..|.||.||..
BL02762___qcr 249 ATCGGCGTGGGTTTTCAAAAGTGGGGACGAAATTGTAGCTTTATCACCGG 298
BSNT_03356___ 296 TTTGTAAACATTTAGGGTGTACGGTGAACTGGAATAGTGATCCTAAAAAC 345
|||||||||||||.|||||||||||.||||||||.||.|||||||||||.
BL02762___qcr 299 TTTGTAAACATTTGGGGTGTACGGTCAACTGGAACAGCGATCCTAAAAAT 348
BSNT_03356___ 346 CCGAATAAATTCTTTTGTCCATGCCATTACGGACTCTATGAAAAGGACGG 395
||||||||.|||||||||||.||||||||||||||.|||||||||||.||
BL02762___qcr 349 CCGAATAAGTTCTTTTGTCCGTGCCATTACGGACTTTATGAAAAGGATGG 398
BSNT_03356___ 396 CACCAATGTCCCTGGCACGCCGCCGCTTGCGCCTCTTGATCATTATGAGC 445
.|||||.||.||.||.||.|||||||||||.|||.|.||.|..|||||||
BL02762___qcr 399 TACCAACGTGCCCGGAACTCCGCCGCTTGCTCCTTTGGACCGCTATGAGC 448
BSNT_03356___ 446 AAGAAGTAAAAGACGGCTTCCTGTATCTT-GGAAAAGCAAAGCCTAAGGG 494
||||.||.||||||||||.|||.|| ||| ||.|||||.|||||.|.|..
BL02762___qcr 449 AAGAGGTTAAAGACGGCTACCTTTA-CTTAGGGAAAGCCAAGCCGAGGAA 497
BSNT_03356___ 495 GGAAGGGTGA 504
|||.||||||
BL02762___qcr 498 GGATGGGTGA 507
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.