Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03349 and BL02759

See Amino acid alignment / Visit BSNT_03349 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence dna-align/BSNT_03349___ypjD.1.5803.seq
#    -bsequence dna-align/BL02759.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03349___ypjD-BL02759.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03349___ypjD-BL02759.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03349___ypjD
# 2: BL02759
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     256/339 (75.5%)
# Similarity:   256/339 (75.5%)
# Gaps:           3/339 ( 0.9%)
# Score: 960.0
# 
#
#=======================================

BSNT_03349___      1 ---GTGAGTGATAAAACAATGAAAGACATACAGGCTGAAGTAGACCGTTA     47
                        ..||..||.|||||.||||||||.||||||..||||||.|||...||
BL02759            1 ATGACGAAAGAAAAAACGATGAAAGATATACAGCGTGAAGTCGACGAATA     50

BSNT_03349___     48 CATCGGCCAATTTAAAGAAGGATATTTTAGCCCGCTGGCCATGATGGCGA     97
                     .||||||||.|||||||||||.|||||.||.|||||.|||||||||||.|
BL02759           51 TATCGGCCAGTTTAAAGAAGGCTATTTCAGTCCGCTTGCCATGATGGCCA    100

BSNT_03349___     98 GGCTGACTGAAGAACTGGGCGAGCTCGCCAGAGAAGTGAATCACCGTTAT    147
                     |.|||||.|||||.||.|||||.||.||.||.|||.|.||.||.|.|||.
BL02759          101 GACTGACGGAAGAGCTTGGCGAACTGGCGAGGGAAATCAACCATCATTAC    150

BSNT_03349___    148 GGAGAAAAACCAAAAAAAGCGACTGAAGATGATAAAAGCATGGAAGAGGA    197
                     ||||||||||||||.|||...||.|||...||.||||..||.|||||.||
BL02759          151 GGAGAAAAACCAAAGAAAAAAACCGAATCGGAAAAAAAGATCGAAGAAGA    200

BSNT_03349___    198 AATGGGCGATGTGCTATTTGTATTGGTTTGTTTAGCCAACTCTCTTGATA    247
                     |||.|||||.||..|.||.||.||.||||||.|.||.||.||.|||.|||
BL02759          201 AATCGGCGACGTATTGTTCGTTTTAGTTTGTCTTGCGAATTCGCTTCATA    250

BSNT_03349___    248 TCTCTTTAGAGGAAGCTCACGACCGAGTCATGCATAAATTTAATACAAGA    297
                     |.||.||.||.|||||.||.||....||||||.|.||.||.||.||..|.
BL02759          251 TATCATTGGATGAAGCGCATGATATGGTCATGGAGAAGTTCAACACCCGT    300

BSNT_03349___    298 GATAAAGATCGCTGGACCAGAAAAGAAGAAGGAAAGTAG    336
                     |||||||||||||||||.|||||||||||||||||||||
BL02759          301 GATAAAGATCGCTGGACAAGAAAAGAAGAAGGAAAGTAG    339


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