Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_03348 and BL02758

See Amino acid alignment / Visit BSNT_03348 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence dna-align/BSNT_03348___dapB.1.5803.seq
#    -bsequence dna-align/BL02758___dapB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03348___dapB-BL02758___dapB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03348___dapB-BL02758___dapB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03348___dapB
# 2: BL02758___dapB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 819
# Identity:     627/819 (76.6%)
# Similarity:   627/819 (76.6%)
# Gaps:          30/819 ( 3.7%)
# Score: 2329.5
# 
#
#=======================================

BSNT_03348___      1 ATGTCAAACGAAACAATTAAAGTAGTCATTGCGGGACCGCGTGGAAGAAT     50
                     |||..|||.||.||.||||||.|.|..||.||.||||||||.||||||||
BL02758___dap      1 ATGCAAAAGGATACCATTAAAATCGCAATAGCAGGACCGCGCGGAAGAAT     50

BSNT_03348___     51 GGG--GCAGGAAGCTGTTAAATTGGCAGAACGA-ACACCTCATTTTGACC     97
                     |||  ||  |||||.||.|||.|.|..||| || ||..|.||||||||.|
BL02758___dap     51 GGGAAGC--GAAGCGGTCAAACTTGTTGAA-GATACCGCACATTTTGAAC     97

BSNT_03348___     98 TTGTCGGGGCCATAGACCATACATACGATCAGCAAAAATTATCTGATGTG    147
                     |||||||.||.||.||||.||||||..|.|...||||..|.||.||||||
BL02758___dap     98 TTGTCGGTGCAATCGACCGTACATATAACCGTGAAAAGCTGTCAGATGTG    147

BSNT_03348___    148 ATGCCTGTTGAG-TCAGATGCTTTCATTTACACAGATATCCATGCCTGCT    196
                     |||.| ||..|| |||||||||.||||||||||.||||||...|..||||
BL02758___dap    148 ATGAC-GTCAAGTTCAGATGCTGTCATTTACACCGATATCACGGAATGCT    196

BSNT_03348___    197 TTACAGAAACACAACCGGATGTCTTGATTGATTTAACAACGCCCGAAATC    246
                     ||.|||||||....||||||||..||||||||||.||||||||.||||||
BL02758___dap    197 TTTCAGAAACGTCTCCGGATGTTCTGATTGATTTGACAACGCCGGAAATC    246

BSNT_03348___    247 GGAAAAGTACATACAAAAATTGCATTAGAGCACGGAGTCCGTCCAGTTGT    296
                     ||.||..|||||||||||||.||.||.||||||||.||||||||.|||||
BL02758___dap    247 GGCAAGCTACATACAAAAATCGCGTTGGAGCACGGCGTCCGTCCTGTTGT    296

BSNT_03348___    297 CGGAACAACCGG--TTTCTCAGAAGCTGATTTAAAAGAGCTCACATCTT-    343
                     .|||||.||.||  |||||.|| ||| ||.||.||.|||||.|     | 
BL02758___dap    297 GGGAACGACAGGATTTTCTGAG-AGC-GACTTGAACGAGCTTA-----TG    339

BSNT_03348___    344 ----TAACAGAAGAAAAAGGGATCGGAGCCATCATCGCGCCAAATTTTGC    389
                         |.||.||.||.||.||.||||||||.||||||||||||||.||.||
BL02758___dap    340 GAACTGACCGATGAGAAGGGAATCGGAGCTATCATCGCGCCAAACTTCGC    389

BSNT_03348___    390 GCTCGGTGCGATACTGATGATGAAATTTTCAAAAATGGCTGCCAACTATT    439
                     ||||||.||..|.|||||||||||.|||||..||||||||||||||||||
BL02758___dap    390 GCTCGGAGCCGTGCTGATGATGAAGTTTTCGCAAATGGCTGCCAACTATT    439

BSNT_03348___    440 TTGAGGATGTTGAGATTATTGAGCTTCATCATGACCAGAAGCTTGACGCA    489
                     ||...||||||||.||.|||||.|..||.|||||.||.||.||||||||.
BL02758___dap    440 TTACCGATGTTGAAATCATTGAACAGCACCATGATCAAAAACTTGACGCG    489

BSNT_03348___    490 CCAAGCGGAACTGCGCTT-AAAACAGCGGAAATGATTTCAGAAGTCCGTA    538
                     |||||||||||.|| ||| |||||.||||||||||||||.|..||.||..
BL02758___dap    490 CCAAGCGGAACGGC-CTTGAAAACGGCGGAAATGATTTCGGCTGTTCGCG    538

BSNT_03348___    539 AAG---AAAAGCAGCAAGGACATCCGGATGAAAAAGAAATTCTCCCAGGA    585
                     |||   |||.||||   ||.||.|||||||||||.||||||||.||.|||
BL02758___dap    539 AAGCGAAAACGCAG---GGGCACCCGGATGAAAAGGAAATTCTGCCGGGA    585

BSNT_03348___    586 GCAAGAGGAGCGGAGCAAAACGGCATTCGCTTGCACAGCGTCCGTCTTCC    635
                     ||||||||.||.||.||||||||.||.||..|.||||||||.|||||.||
BL02758___dap    586 GCAAGAGGCGCCGATCAAAACGGAATCCGTCTCCACAGCGTTCGTCTGCC    635

BSNT_03348___    636 GGGACTGATCGCGCATCAGGAGGTCATGTTCGGCATGGATGGCCAAACGC    685
                     ||||.||||.||.||||||||.||.|||||||||...||.||||||||.|
BL02758___dap    636 GGGATTGATTGCCCATCAGGAAGTGATGTTCGGCGGAGACGGCCAAACCC    685

BSNT_03348___    686 TTCAGATACGCCATGATTCTTATAACCGGGCTTCTTTCATGTCAGGCGTT    735
                     |..|.||.||.||.|||||.||.||.||.||.|||||.|||||.||.||.
BL02758___dap    686 TGAAAATCCGTCACGATTCATACAATCGCGCATCTTTTATGTCTGGTGTG    735

BSNT_03348___    736 AAACTGTCAGTCGAACAAGTCATGAAGATTGATCAGCTTGTGTACGGTTT    785
                     ||||||.|.||.||||||||.|||||.||.|||||||||||.|||||..|
BL02758___dap    736 AAACTGGCTGTTGAACAAGTGATGAAAATCGATCAGCTTGTCTACGGCCT    785

BSNT_03348___    786 AGAAAATATCATTGATTAG    804
                     .|||||||||||.||.||.
BL02758___dap    786 TGAAAATATCATAGAGTAA    804


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03348 and BL02758

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
