Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03347 and BL02757
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_03347___mgsA.1.5803.seq
# -bsequence dna-align/BL02757___mgsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03347___mgsA-BL02757___mgsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03347___mgsA-BL02757___mgsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03347___mgsA
# 2: BL02757___mgsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 419
# Identity: 304/419 (72.6%)
# Similarity: 304/419 (72.6%)
# Gaps: 10/419 ( 2.4%)
# Score: 1000.0
#
#
#=======================================
BSNT_03347___ 1 ATGAAAATTGCTTTGATCGCGCATGACAAGAAAAAACAGGATATGGTTCA 50
.|||||||.||.||.||.||.||||||...|||||||||||||||.||||
BL02757___mgs 1 TTGAAAATCGCCTTAATTGCCCATGACCGAAAAAAACAGGATATGATTCA 50
BSNT_03347___ 51 ATTTACGACTGCCTATCGGGATATTTTAAAGAATCATGATCTATACGCAA 100
..|.|||||.||.|||...||.||||||||.||.|||||.||.|..||.|
BL02757___mgs 51 GCTGACGACCGCTTATAAAGACATTTTAAAAAAGCATGAGCTGTTTGCGA 100
BSNT_03347___ 101 CCGGAACCACAGGGTTGAAAATTCA-AGAGGCGACAGGTCTTCAAATTGA 149
|.|||||.|| .||||.||||.||| .||.||||||||.||.|...|.|.
BL02757___mgs 101 CAGGAACGAC-CGGTTTAAAAATCACTGAAGCGACAGGGCTGCCCGTCGT 149
BSNT_03347___ 150 ACGTTTTCAATCCGGCCCTTTAGGGGGAGACCAGCAAATCGGTGCACTGA 199
.||.||||||||.||.||..|.||.||.||||||||.|||||.||..|||
BL02757___mgs 150 GCGCTTTCAATCGGGGCCGCTTGGCGGTGACCAGCAGATCGGCGCTTTGA 199
BSNT_03347___ 200 TCGCTGCCAATGCAC-TCGATCTTGTCATTTTTTTGCGCGACCCGCTGAC 248
||||....|||| || ||||||||||.||||||.||.|.|||||||||||
BL02757___mgs 200 TCGCGAAAAATG-ACATCGATCTTGTGATTTTTCTGAGAGACCCGCTGAC 248
BSNT_03347___ 249 CGCGCAGCCGCATGAACCGGATGTCTCGGCATTAATCCGGTTATGTGATG 298
.||.||||||||.|||||.||.||.||.||..|.|||||.||.|.|||.|
BL02757___mgs 249 GGCCCAGCCGCACGAACCTGACGTGTCAGCGCTTATCCGCTTGTCTGACG 298
BSNT_03347___ 299 TGTATTCCATTCCGCTCGCCACAAATATGGGTACTGCGGAAATTCTTG-T 347
|.|||.||||||||||||||||.||.|||||.|||||||||| ||||| |
BL02757___mgs 299 TTTATGCCATTCCGCTCGCCACCAACATGGGAACTGCGGAAA-TCTTGAT 347
BSNT_03347___ 348 GCGCACACTTGATGAAGGTGTTTTCGAATTCCGTGACCTTCTTC-GGGGA 396
.||..|..|.||.|||||.|..||.||.|||.|..||.||.|.| .||.|
BL02757___mgs 348 CCGTTCTGTCGAGGAAGGCGCGTTTGAGTTCAGAAACATTGTCCACGGCA 397
BSNT_03347___ 397 GAAGAGC-CGAATGTATAA 414
| .||.| || |||..|.|
BL02757___mgs 398 G-GGATCGCG-ATGCTTGA 414
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