Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03346 and BL02756
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_03346___ypjG.1.5803.seq
# -bsequence dna-align/BL02756.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03346___ypjG-BL02756.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03346___ypjG-BL02756.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03346___ypjG
# 2: BL02756
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 809
# Identity: 483/809 (59.7%)
# Similarity: 483/809 (59.7%)
# Gaps: 169/809 (20.9%)
# Score: 1430.5
#
#
#=======================================
BSNT_03346___ 1 --------------------------ATGTAT---AATGC-TGACGTTCT 20
|.|.|| .|||| |||..|.||
BL02756 1 TTGAGTTCAGAAACATTGTCCACGGCAGGGATCGCGATGCTTGATATACT 50
BSNT_03346___ 21 TGCTTTTGGCGCCCACAGTGATGATGTCGAGATCGGAATGGGCGGCACAA 70
||||||.||.||.|||||.||||||||.||.|||||.|||||.||.||.|
BL02756 51 TGCTTTCGGTGCACACAGCGATGATGTAGAAATCGGCATGGGAGGAACCA 100
BSNT_03346___ 71 TAGCGAAGTTTGTCAAACAGGGAAAAAAAG------TAAT---GATATGC 111
|||.||||.|....||||||| .||| .||.|||
BL02756 101 ---------TTGCCAAATATACTAAAAAAGGCTTTCAAATTGGAATCTGC 141
BSNT_03346___ 112 GACTTGACAGAAGCGGAACTCTCTTCTAACGGTACGGTCAGTTTACGTAA 161
||.||.||..|.||.|||||.|||||.|||||.||.|| ||.||
BL02756 142 GATTTAACCCAGGCTGAACTGTCTTCAAACGGAACAGT-------CGAAA 184
BSNT_03346___ 162 --AGAAGAAGCAGCTGAAGCAGC--------CCGCATATT---------A 192
||||.|||| |||||.|| ||| |.||| |
BL02756 185 CGAGAAAAAGC----GAAGCGGCGCTGGCGGCCG-AAATTCTCGGCGCCA 229
BSNT_03346___ 193 G-GCGCAGATAAAAGAATTCAGCTGACGCTTCCAGACCGCGGCCTAATAA 241
| .|||.||| ||| .||.|||||.||.|||.|.||.||
BL02756 230 GTCCGCGGAT-------TTC-CCTCACGCTGCCGGACAGGGGGCT----- 266
BSNT_03346___ 242 TGAGT----------------GATCAGGCAATTCGGTCGATTGTCACTGT 275
|| |||||| ||.|| ||||..|.||
BL02756 267 ---GTTTCCCAGCCAGGCGGCGATCAG-------GGACG-TTGTTGCCGT 305
BSNT_03346___ 276 CAT-------CAGAACCTGCCGCCCAAAAGC-GGTTTTTATGCCGTATAA 317
||| ||.||.|.| |||| .||.|||.|.||.|||..
BL02756 306 CATTCGGAAACATAAACCG--------AAGCTTGTCTTTGTCCCTTATCC 347
BSNT_03346___ 318 AAAGGATCGCCATCCGGATCACGGCAATGCGGCTGCACTGGTGGAAGAAG 367
||||||.||.|||||.||||||||..|.||.||.|.|.|.||.|||||||
BL02756 348 AAAGGACCGGCATCCCGATCACGGGCACGCAGCGGAAATCGTCGAAGAAG 397
BSNT_03346___ 368 CGATCTTTTCCGCCGGAATCCATAAATATAAAGATG----AAAAAAGCCT 413
||.||||||||||.||.||.||||||||..|||||| ||||.||
BL02756 398 CGGTCTTTTCCGCTGGTATACATAAATACGAAGATGCAGAAAAACAG--- 444
BSNT_03346___ 414 TCCGGCGCATAAAGTCAGCAAGGTTTACTATTATATGATAAATGGTTTTC 463
|||||.|||||||||...||.||.|||||.||||||||.||.|||||||
BL02756 445 -CCGGCCCATAAAGTCCAAAACGTGTACTACTATATGATCAACGGTTTTC 493
BSNT_03346___ 464 ATCAGCCGGATTTTGTCATTGATATCTCGGATACAATAGAGGCAAAGAAA 513
|..|.||.||.||||||||.||.||.||.||.||.|| |||..|||
BL02756 494 ACAAACCTGAGTTTGTCATCGACATTTCTGAAACGAT-----CAATCAAA 538
BSNT_03346___ 514 CAAA-----GCCTCAACGCCTACAAAAGCCAGTTTA-----TCCCGTCAA 553
.||| ||||....||.||..|.||||||||.| |||||
BL02756 539 AAAAGGATGGCCTTGCTGCTTATCAGAGCCAGTTCACCCGTTCCCG---- 584
BSNT_03346___ 554 AGGATTCAGTTTCTACTCCTCTGACGAATGGTTATATCGAGATCGTTGAA 603
|.|.||.|||...||.||.|||||.||.||.|||||.||.|..||.|||
BL02756 585 -GCAGTCGGTTGAAACACCGCTGACAAACGGATATATTGAAACGGTCGAA 633
BSNT_03346___ 604 GCGAGAGAAAAGCTTTACGGTAAAGAAGCGGGCGTGGAGTATGCCGAAGG 653
||.||.||||||||||..||.|||||.|..|||||.|..||.||.|||||
BL02756 634 GCCAGGGAAAAGCTTTTGGGAAAAGAGGTCGGCGTCGCATACGCGGAAGG 683
BSNT_03346___ 654 TTTCTTTTCCAAACGGATGCTGATGCTTGATC-ATGATGTGCTTGGGGGC 702
.||.|||||.||.||||..||..|| ||.|.| |.|||.|..||||||||
BL02756 684 GTTTTTTTCAAAGCGGACTCTTCTG-TTAAACAACGATTTATTTGGGGGC 732
BSNT_03346___ 703 GAACAATGA 711
| .||||
BL02756 733 G---GATGA 738
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