Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03345 and BL02755
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_03345___ypjH.1.5803.seq
# -bsequence dna-align/BL02755.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03345___ypjH-BL02755.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03345___ypjH-BL02755.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03345___ypjH
# 2: BL02755
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1239
# Identity: 837/1239 (67.6%)
# Similarity: 837/1239 (67.6%)
# Gaps: 162/1239 (13.1%)
# Score: 2843.5
#
#
#=======================================
BSNT_03345___ 1 ATGAGAAAACTAAAAATAGGAATCACATGCTATCCGAGCGTTGGAGGCTC 50
||||.|.|..|||||||.|||||||||||.||||||||.||.||.||.||
BL02755 1 ATGAAACAGTTAAAAATCGGAATCACATGTTATCCGAGTGTCGGCGGATC 50
BSNT_03345___ 51 AGGTATCATTGCGACAGAACTGGGGAAGCAGCTTGCTGAAAAGGGACATG 100
|||.||.||.||.||.||.||.||.||||.||||||.|||||.|||||||
BL02755 51 AGGAATTATCGCCACCGAGCTCGGCAAGCTGCTTGCGGAAAAAGGACATG 100
BSNT_03345___ 101 AAATCCATTTCATCACATCAAGCATTCCGTTTAGACTGAATACA-TATCA 149
||||.|||||.||.||||||||..||||||..||.||.||||.| |.| |
BL02755 101 AAATTCATTTTATTACATCAAGTGTTCCGTACAGGCTCAATAAAGTGT-A 149
BSNT_03345___ 150 TCCCAATATTCATTTTCATGAAGTTGAGGTTAATCAATATGCTGTTTTTA 199
|.||||.||..|||||||.|||||.||.||.|||||||||||.|||||||
BL02755 150 TTCCAACATCTATTTTCACGAAGTCGAAGTCAATCAATATGCCGTTTTTA 199
BSNT_03345___ 200 AGTATCCTCCGTATGATTTGACATTGGCAAGCAAAATCGCAGAGGTGGCG 249
||||.||.||||||||||||.|.|||||.||||||||.||.||||||||.
BL02755 200 AGTACCCGCCGTATGATTTGGCTTTGGCCAGCAAAATGGCGGAGGTGGCA 249
BSNT_03345___ 250 GAACGGGAGAATTTAGACATTATCCATGCTCACTATGCTCTCCCGCATGC 299
.|.|||||..|..|.||..||.|.|||||.|||||.||..|.||.||.||
BL02755 250 AAGCGGGAACAGCTTGATGTTCTGCATGCCCACTACGCGGTGCCTCACGC 299
BSNT_03345___ 300 CGTTTGCGCCTATCTTGCAAAACAAATGCTGAAACGCAATATCGGCATT- 348
..|||.|||.|.|.|.||.||.|||||||||||..|.|| ||||
BL02755 300 GATTTCCGCTTTTTTAGCGAAGCAAATGCTGAACGGAAA------CATTA 343
BSNT_03345___ 349 -----GTTACAACTTTGCATGGCACGGATATCACGGTGTTAGGTTATGAT 393
||.|||||..||||.|||||.|||||.||.|||.|.||.||||||
BL02755 344 AAACGGTCACAACGCTGCACGGCACAGATATAACCGTGCTCGGCTATGAT 393
BSNT_03345___ 394 CCGTCTCTAAAAGATCTGATCCGTTTTGCTATTGAGTCATCAGACAGGGT 443
||||||.|||||||.||||||...|||||.||.||.||.||.|||.|.||
BL02755 394 CCGTCTTTAAAAGACCTGATCAAGTTTGCGATCGAATCGTCTGACCGCGT 443
BSNT_03345___ 444 GACGGCCGTCTCCTCAGCGCTTGCGGCTGAAACGTACGATTTAATTAAAC 493
.||.||.||.||.||.||.|||||.||..|||||||.|||||.||.||||
BL02755 444 TACCGCGGTTTCTTCGGCTCTTGCCGCGCAAACGTATGATTTGATCAAAC 493
BSNT_03345___ 494 CGGAGAAAAAAATTGAAACGATTTATAACTTTATAGACGAGCGCGTGTAT 543
||.|.|||||||||||||||||.|||||.|||.|.||.||||||||||||
BL02755 494 CGAACAAAAAAATTGAAACGATCTATAATTTTGTGGATGAGCGCGTGTAT 543
BSNT_03345___ 544 CTGAAGAAAAACACAGCGG--TGATT-----AAAGAGAAACATGGAATTT 586
.| |||||.||||..| |.||| ||||||.|..|.||.|||.
BL02755 544 TT----AAAAAAACAGGAGCATCATTCGCTGAAAGAGCAGTACGGCATTG 589
BSNT_03345___ 587 TACCAGATGAAAAAGTCGTCATCCATGTGTCCAACTTTAGAAAGGTTAAA 636
.|||.|||||||||||..|||||||.||.|||||.||.|||.||||.||.
BL02755 590 CACCTGATGAAAAAGTGATCATCCACGTATCCAATTTCAGACAGGTGAAG 639
BSNT_03345___ 637 CGCGTGCAGGACGTCATCCGTGTGTTCCGCAATATCGC--TGGCA---AA 681
|||||.|||||.|||||||.|||.|||.|| ||| ||.|| ||
BL02755 640 CGCGTACAGGATGTCATCCATGTATTCAGC-----CGCATTGTCAAACAA 684
BSNT_03345___ 682 ACGAAAGCGAAGCTGCTTTTAGTCGGAGACGGTCCGGAGAAATCGACAG- 730
|.||||.||||||||.||.|.|||||.|||||.||| ||||| |||.|
BL02755 685 ATGAAATCGAAGCTGATTCTCGTCGGCGACGGGCCG--GAAAT-GACCGT 731
BSNT_03345___ 731 --CCTGCGAGCTTATCAGAAAATATGGCTTGG-----AAGACCAAG-TCT 772
.||||.|||||.|||||.| |||.|| |||||.|.| |||
BL02755 732 GATCTGCCAGCTTGTCAGACA-----GCTCGGATTAAAAGACGACGTTCT 776
BSNT_03345___ 773 TAATGCTTGGAAATCAAGACCGTGTTGAAGAGCTTTATTCTATTAGCGAT 822
| .|.|||||.||.||||||.|.||.|||||||||||..|.||.||||||
BL02755 777 T-TTCCTTGGCAAACAAGACAGCGTAGAAGAGCTTTACGCCATCAGCGAT 825
BSNT_03345___ 823 TTGAAGCTGCTGCTATCTGAAAAAGAAAGCTTTGGCCTTGTCCTGCTTGA 872
||.||||||||..|.||.||.||.||||||||.||..|.||.||||||||
BL02755 826 TTAAAGCTGCTTTTGTCCGAGAAGGAAAGCTTCGGTTTAGTGCTGCTTGA 875
BSNT_03345___ 873 AGCGATGGCTTGCGGAGTGCCTTGTATTGGAACAAACATTGGCGGTATCC 922
|||||||||.|||||.||.||.||.||.||.|||||.||.||.||.||.|
BL02755 876 AGCGATGGCCTGCGGCGTTCCGTGCATCGGCACAAATATCGGGGGGATTC 925
BSNT_03345___ 923 CTGAGGTTATAAAAAACAATGTGAG----CGGATTTTTGGTGGATGTCGG 968
|.|||||.||.|||||| .||| |||.|..|||||.||||||||
BL02755 926 CCGAGGTGATCAAAAAC----GGAGTATCCGGTTACTTGGTCGATGTCGG 971
BSNT_03345___ 969 TGATGTT-ACGGCCGCAAC-----AGCCCGCGCGATGAGCATTTTAGAA- 1011
.|||.|| |.|| .|||.| || |||| ..||||| |
BL02755 972 AGATATTGAAGG-TGCAGCTAGTAAG---GCGC----TTCATTT----AC 1009
BSNT_03345___ 1012 -----GATGAA------CAGCTAAGCAATCGTTTTACAAAGGCGGCAATA 1050
|||||| |||| || |..|||.|..|.|||||
BL02755 1010 TGACTGATGAAAGCCTGCAGC---GC---CAGTTTGCGGAAGCGGC---- 1049
BSNT_03345___ 1051 GAGATGCTTGAA------AATGAA---TTTTCTTCTAAAAAAATTGTCAG 1091
|||..|| ||.||| ||||||||.||.|||||..|| |
BL02755 1050 -----GCTGCAAAGCATCAAGGAACGCTTTTCTTCCAACAAAATCATC-G 1093
BSNT_03345___ 1092 C-CAGTATGAACAGATTTATGCCGATTTAGCAGAACCGGAGTGA------ 1134
| ||.||||||.|.||||||....|.|||.||||...||||||.
BL02755 1094 CGCAATATGAAGAAATTTATCAACAATTAACAGACTGGGAGTGTGACAAT 1143
BSNT_03345___ 1134 --------------------------------------- 1134
BL02755 1144 GGAGGATCTCTTTTTGAAGGCTCTTCCTCTCCTTCGTGA 1182
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