Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03334 and BL02746

See Amino acid alignment / Visit BSNT_03334 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence dna-align/BSNT_03334___aspB.1.5803.seq
#    -bsequence dna-align/BL02746___aspB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03334___aspB-BL02746___aspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03334___aspB-BL02746___aspB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03334___aspB
# 2: BL02746___aspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1197
# Identity:     904/1197 (75.5%)
# Similarity:   904/1197 (75.5%)
# Gaps:          27/1197 ( 2.3%)
# Score: 3300.0
# 
#
#=======================================

BSNT_03334___      1 TTGAAACTGGCAAAAAGAGTATCCGCATTAACACCATCAACCACACTGGC     50
                     |||||.||.||.|||||||||||.||.|||||||||||..|.|||.||||
BL02746___asp      1 TTGAATCTAGCTAAAAGAGTATCAGCGTTAACACCATCTGCAACATTGGC     50

BSNT_03334___     51 AATCACAGCGAAAGCGAAAGAACTGAAAGCCGCAGGCCATGATGTCATCG    100
                     ||||||.||.|||||.||||||.|.|||||.|||||.||.||.|||||||
BL02746___asp     51 AATCACTGCAAAAGCAAAAGAATTAAAAGCGGCAGGGCACGACGTCATCG    100

BSNT_03334___    101 G-CTTAGGAGCAGGCGAGCCTGACTTCAATACACCGCAGCATATTATTGA    149
                     | ||| ||.|||||.|||||.||.||.|||||.||..||||.||.|||||
BL02746___asp    101 GTCTT-GGGGCAGGTGAGCCGGATTTTAATACGCCTGAGCACATCATTGA    149

BSNT_03334___    150 TGCCGCTGTGCGTTCGATGAACGAGGGCCATACGAAATACACGCCTTCCG    199
                     .||.|||||.||||||||||||||.||.|||||.||||||||||||||||
BL02746___asp    150 AGCGGCTGTCCGTTCGATGAACGAAGGACATACCAAATACACGCCTTCCG    199

BSNT_03334___    200 GTGGTTTGGCTGAACTGAAAAACAGCAT-TGCAGAGAAATTTAAACGCGA    248
                     |.|||.|.||.|..||||||.||||||| .|| ||.|||||.||.|||||
BL02746___asp    200 GCGGTCTTGCGGCGCTGAAAGACAGCATCCGC-GATAAATTCAAGCGCGA    248

BSNT_03334___    249 CCAGAATATTGAATACAAACCGTCTCAAATTATTGTCTGCACTGGTGCCA    298
                     .|||...||||||||||..|..||..||.|||||||.|||||.|||||.|
BL02746___asp    249 TCAGGGAATTGAATACAGCCAATCGGAAGTTATTGTGTGCACAGGTGCAA    298

BSNT_03334___    299 AACATGCTCTGTATACCCTTTTCCAAGTGATTTTGGATGAAGAAGATGAA    348
                     |.||||||||.||.|||||.||.||||||.|..|.||.||||..||.|||
BL02746___asp    299 AGCATGCTCTTTACACCCTATTTCAAGTGCTCCTCGACGAAGGGGACGAA    348

BSNT_03334___    349 GTTATTATTCCAACGCCTTACTGGGTAAGCTACCCGGAGCAGGTGAAACT    398
                     ||.||||||||.||.||.||||||||.|||||.||.||.||.||.||.||
BL02746___asp    349 GTGATTATTCCGACTCCGTACTGGGTCAGCTATCCTGAACAAGTCAAGCT    398

BSNT_03334___    399 CGCTGGCGGAAAGCCTGTTTATGTAGAAGGGCTTGAGGAAAATCA-CTTC    447
                     .||.|||||.||.|||||.|.|||.|||||.||||||||||| || ||||
BL02746___asp    399 TGCAGGCGGCAAACCTGTGTTTGTGGAAGGCCTTGAGGAAAA-CAGCTTC    447

BSNT_03334___    448 AAAATTTCGCCTGAGCAGCT-GAAAAATGCAATTACGGAAAAAACAAAAG    496
                     ||.|||||.||.|||||||| |||||| ||..|.||.||||||||.||.|
BL02746___asp    448 AAGATTTCTCCGGAGCAGCTCGAAAAA-GCCGTCACAGAAAAAACGAAGG    496

BSNT_03334___    497 CAATCGTTATTAACTCTCCAAGCAACCCGACTGGTGTCATGTATACGGAA    546
                     |..|..|.||.||.||.||||||||.|||||.||..|.||||||||||||
BL02746___asp    497 CTGTGATCATCAATTCCCCAAGCAATCCGACAGGGATGATGTATACGGAA    546

BSNT_03334___    547 GAAGAACTATCTGCGCTCGGTGAAGTGTGCCTTGAACATGATATCTTGAT    596
                     |||||.||....||.|||||||||||.||||||..||...|..|.||.||
BL02746___asp    547 GAAGAGCTCAAAGCTCTCGGTGAAGTATGCCTTCGACGCAACGTTTTAAT    596

BSNT_03334___    597 TGTGTCAGATGAAATTTATGAAAAACTTACATACGGCGGAAAGAAACATG    646
                     .||.||.||||||||.||||||||.||.|..|||||||||||.|||||||
BL02746___asp    597 CGTATCTGATGAAATATATGAAAAGCTGATTTACGGCGGAAAAAAACATG    646

BSNT_03334___    647 TTTCCATTGCACAGCTGT---CAGACAGACTGAAAGAACAAACGGTCATT    693
                     |.||||||||||||||.|   ||||   |||.|||.|.|||||.||.||.
BL02746___asp    647 TATCCATTGCACAGCTTTCTCCAGA---ACTTAAAAACCAAACCGTGATC    693

BSNT_03334___    694 ATAAACGGCGTATCGAAGTCCCACAGCATGACAGGTTGGAGAATCGGTTA    743
                     ||.|||||.||.||.|||||.|||||||||||.||.||||||||||||||
BL02746___asp    694 ATCAACGGGGTTTCCAAGTCACACAGCATGACCGGCTGGAGAATCGGTTA    743

BSNT_03334___    744 TGCGGCAGGCTCTGAAGACATTATTAAAGCGATGACGAACCTTGCAAGCC    793
                     |||.||||||...|||...||.||||||||||||||||||||.||.||||
BL02746___asp    744 TGCAGCAGGCAGCGAACCGATCATTAAAGCGATGACGAACCTAGCCAGCC    793

BSNT_03334___    794 ACAGCACGTCAAACCCGACATCAATCGCACAATACGGAGCGATTGCTGCT    843
                     |||||||||||||.||||||||..||||.|||||.|||||.|||||.|||
BL02746___asp    794 ACAGCACGTCAAATCCGACATCTGTCGCTCAATATGGAGCCATTGCCGCT    843

BSNT_03334___    844 TATAACGGGCCTTCTGAGCCATTGGAAGAAATGAGAGAAGCATTTGAACA    893
                     ||.||.|||||....|||||..|.||.||.||||||.||||.||||||.|
BL02746___asp    844 TACAATGGGCCAAACGAGCCTGTTGAGGAGATGAGAAAAGCTTTTGAAGA    893

BSNT_03334___    894 TAGATTAAATACGATCTATGCAAAGCTCATAGAAATCCCAGGGTTCAGCT    943
                     ..|..|.||.|.|.|.||||.|..|||..|.||.||.||.||.||.|..|
BL02746___asp    894 ACGGCTGAACAAGGTGTATGAACTGCTTGTTGACATTCCGGGATTAACAT    943

BSNT_03334___    944 GTGTGAAGCCGGAAGGTGCTTTTTACTTATTCCCAAATGCAAAAGAGGCA    993
                     |..|||||||.|||||.||.||.|||||.|||||.|||||||||.|.||.
BL02746___asp    944 GCCTGAAGCCTGAAGGAGCCTTCTACTTGTTCCCGAATGCAAAAAAAGCG    993

BSNT_03334___    994 GCTCAATCTTGCGG--TTTCAAAGATGTAGATGAATTTGTTAAAGCGCTT   1041
                     ||..||||.|||||  ||||||  ..||.||||||||.|...||||||||
BL02746___asp    994 GCAGAATCGTGCGGCTTTTCAA--GCGTTGATGAATTCGCCGAAGCGCTT   1041

BSNT_03334___   1042 CTCGAGGAGGAAAAAGTTGCGATTGTTCCAGGATCCGGATTTGGCTCTCC   1091
                     .|.||.||.|||||.||||||||.|||||.||.||.||.||.|||.|.||
BL02746___asp   1042 TTGGAAGAAGAAAAGGTTGCGATCGTTCCTGGTTCAGGGTTCGGCGCACC   1091

BSNT_03334___   1092 TGAGAATGTCCGTCTTTCTTATGCAACATC---GTTAGATCTTCTTGAAA   1138
                     .||.||..|||||||.||.|||||.|||||   ||.|   |||.|.|||.
BL02746___asp   1092 GGACAACATCCGTCTGTCGTATGCGACATCCCTGTCA---CTTTTGGAAG   1138

BSNT_03334___   1139 AAGCCATTGAAAGAATCAAGCGTTTTGTAGAAAAACATA---GCTAA   1182
                     ||||..|||||.|.|||...||.|||||.|..||.|..|   ||||.
BL02746___asp   1139 AAGCGGTTGAACGCATCCGCCGCTTTGTCGTGAATCGCAGCCGCTAG   1185


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