Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03329 and BL02743
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence dna-align/BSNT_03329___nth.1.5803.seq
# -bsequence dna-align/BL02743___nth.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03329___nth-BL02743___nth.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03329___nth-BL02743___nth.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03329___nth
# 2: BL02743___nth
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 667
# Identity: 516/667 (77.4%)
# Similarity: 516/667 (77.4%)
# Gaps: 11/667 ( 1.6%)
# Score: 1957.5
#
#
#=======================================
BSNT_03329___ 1 GTGTTAAATCTAAAACAAATTGAATTCTGTTTAGACAAGATAGGTGACAT 50
.||.|||....||||||.||.||.||.||||||||||..||.|||||.||
BL02743___nth 1 ATGCTAACAAAAAAACAGATCGAGTTTTGTTTAGACACAATCGGTGAAAT 50
BSNT_03329___ 51 GTTTCCTCATGCGGAGTGTGAACTGGTTCATTCCAATCCTTTTGAATTAG 100
||||||..||||.|||||.|||.|.||.|||..||||||.||||||.|.|
BL02743___nth 51 GTTTCCGGATGCAGAGTGCGAATTAGTCCATGACAATCCGTTTGAACTTG 100
BSNT_03329___ 101 TGGTGGCTGTTGCTTTATCTGCGCAATGTACAGATGCACTTGTAAACAGA 150
|..|.|||||.||||||||.||.||.||.|||||.||.|||||.||.|.|
BL02743___nth 101 TCATCGCTGTCGCTTTATCGGCCCAGTGCACAGACGCGCTTGTCAATAAA 150
BSNT_03329___ 151 GTGACCAAAACATTATTCCAAAAATATAAACGGCCGGAAGACTATTTGGC 200
|||||.|||||..|.|||||||||||.|||...||.|||||.|||.|.||
BL02743___nth 151 GTGACGAAAACGCTTTTCCAAAAATACAAAAAACCTGAAGATTATCTTGC 200
BSNT_03329___ 201 TGTTCCGCTGGAAGAGCTTCAGCAGGATATTAAATCAATCGGTTTATATC 250
.||||||||.||||||||.||||||||.||.|||||.|||||.|||||.|
BL02743___nth 201 AGTTCCGCTTGAAGAGCTGCAGCAGGACATCAAATCGATCGGCTTATACC 250
BSNT_03329___ 251 GTAATAAAGCGAAAAATATTCAAAAGCTGAGTAAAATGATTATTGAAGAT 300
|.||.|||||.||||||||||||||||||.|.||||||.|..|.|||||.
BL02743___nth 251 GCAACAAAGCTAAAAATATTCAAAAGCTGTGCAAAATGCTGCTGGAAGAC 300
BSNT_03329___ 301 TACGGCGGAGAAGTGCCGAGAGACCGCGATGAGCTTGTCAAACTGCCAGG 350
|||||.||.||||||||||||||||||||||||||.||.|||||.||.||
BL02743___nth 301 TACGGAGGTGAAGTGCCGAGAGACCGCGATGAGCTGGTGAAACTTCCGGG 350
BSNT_03329___ 351 GGTCGGGAGAAAGACCGCAAACGTAGTGGTATCCGTTGCGTTTGGCGTGC 400
.|||||.|||||||||||.||.||.||.||.|||||.||.||.|||||.|
BL02743___nth 351 TGTCGGAAGAAAGACCGCTAATGTCGTCGTTTCCGTGGCATTCGGCGTTC 400
BSNT_03329___ 401 CGGCCATAGCCGTAGATACCCATGTGGAGAGAG--TCAGCAAACGATTGG 448
|.|||||.|||||.||.|||||||||||.|||| ||| |||.|..|.|
BL02743___nth 401 CTGCCATTGCCGTCGACACCCATGTGGAAAGAGTTTCA--AAAAGGCTCG 448
BSNT_03329___ 449 GCATTTGCCGGTGGAAGGACTCGGTTCTGGAAGTTGAAAAGACGCTGATG 498
|||||||..|.||||||||.|||||..|||||||||||||||||||||||
BL02743___nth 449 GCATTTGTAGATGGAAGGATTCGGTCATGGAAGTTGAAAAGACGCTGATG 498
BSNT_03329___ 499 CGCAAGGTTCCCAAAGAAGATTGGTCCGTTACGCATCACCGGCTT-ATTT 547
...||.||.||..||..|||.||||||||.||.||||||| |||| ||||
BL02743___nth 499 AAAAAAGTGCCTGAATCAGAGTGGTCCGTCACTCATCACC-GCTTGATTT 547
BSNT_03329___ 548 TCTTCGGCAGATATCACTGTAAAGCCCAATCTCCGCGCTGTGCGGAGTGT 597
|.||||||.|.|||||||||||.||.|||...|||...||.|..||.||.
BL02743___nth 548 TTTTCGGCCGCTATCACTGTAAGGCGCAAAGACCGAAATGCGAAGAATGC 597
BSNT_03329___ 598 CCGCTGCTTTCTTTGTGCAGAGAAGGGCAGAAGAGGGATAAAAAAGGACT 647
|||.||.|||||.|||||||.||||||||.||..|..||||||||||.||
BL02743___nth 598 CCGTTGTTTTCTCTGTGCAGGGAAGGGCAAAAACGATATAAAAAAGGGCT 647
BSNT_03329___ 648 GGTGAAAC----GATGA 660
||||||.| | |||
BL02743___nth 648 GGTGAAGCTGCTG-TGA 663
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