Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03322 and BL02741
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence dna-align/BSNT_03322___yppC.1.5803.seq
# -bsequence dna-align/BL02741.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03322___yppC-BL02741.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03322___yppC-BL02741.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03322___yppC
# 2: BL02741
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1049
# Identity: 703/1049 (67.0%)
# Similarity: 703/1049 (67.0%)
# Gaps: 181/1049 (17.3%)
# Score: 2312.0
#
#
#=======================================
BSNT_03322___ 1 GTGCAAGAACAACAGACCATT---------AGAAAGCTTCTGAGCCGGAT 41
.||| |||||| |.|| .| ||||...||||||.||
BL02741 1 TTGC----ACAACA---CTTTTTCCGCGGCGG--AGCTGACGAGCCGCAT 41
BSNT_03322___ 42 T---GAGC-GGCAGACAAAAATAAAAAACGCGGATAACATTTCAAGAACA 87
| |||| |.|.| |||||.|.||.|| |||.||.||.|||.|.|||
BL02741 42 TCAAGAGCTGACCG-CAAAACTGAACAA---GGACAATATCTCACGGACA 87
BSNT_03322___ 88 AATGCTTATAAA-GC-ATTTTACGACCGTCACCCGGAAATCAAATGGTCG 135
|||||.||.||| || |.||| |||||.||.||.||||||||.||||||
BL02741 88 AATGCCTACAAACGCTACTTT--GACCGCCATCCTGAAATCAAGTGGTCG 135
BSNT_03322___ 136 CTTTTGGCTTCTTTCGTTTCTCGTAATGCCGGCTGGTCAATGACTGACTT 185
|||||||||||.||.|||||.||.||||||||||||||.|||||.||.||
BL02741 136 CTTTTGGCTTCATTTGTTTCCCGGAATGCCGGCTGGTCGATGACCGATTT 185
BSNT_03322___ 186 AAAAGGCAGTCTGTTTC-AGCTTGGACT--CCG----TGAGAGACAGCAA 228
||||||..| ||..||| ||||.||||| |.| | |||||.
BL02741 186 AAAAGGGCG-CTTATTCGAGCTCGGACTTACGGCTTTT------CAGCAG 228
BSNT_03322___ 229 GAATGGTTCTTTTTAGCCTATGAAAGAGCGAACTGGCTTATTTTTTCGGA 278
.|||||.|.||||||||.|||||.||||||||||||||.||.|||||.||
BL02741 229 AAATGGCTGTTTTTAGCGTATGAGAGAGCGAACTGGCTGATCTTTTCAGA 278
BSNT_03322___ 279 TGCCTATCCGCAGCTTCTACTATACCACTGGTCAAAAAG-AG-TTGGGAA 326
.||||||||||||||.||.||||||||.||||| .||| || ||||..|
BL02741 279 CGCCTATCCGCAGCTCCTGCTATACCATTGGTC--CAAGCAGCTTGGCCA 326
BSNT_03322___ 327 ACCGCTGTTTCATCTGCT----GCATGTGTTTGGCGTCTCACAATTTATG 372
.||||||||||||.|||| .|| ||||||||.||...||||||
BL02741 327 GCCGCTGTTTCATTTGCTCTCCTCA----TTTGGCGTGTCTTCATTTAT- 371
BSNT_03322___ 373 TCGGAA----GAATGGACCCGTTTTTGGCATGAGCG-----AAATACGGA 413
||| ||.|||...||.||.||||||||||| ||| |
BL02741 372 ---GAAAACGGAGTGGGAGCGGTTCTGGCATGAGCGCGATCAAA-----A 413
BSNT_03322___ 414 GCGGCTAATGTATGCCCTCATTATAAATGAACAAAACACTATCCAAACAC 463
||||||.|||||.||.||||||||||||||||||||||||||||||||.|
BL02741 414 GCGGCTCATGTACGCTCTCATTATAAATGAACAAAACACTATCCAAACTC 463
BSNT_03322___ 464 CTATTATACAAAATCCTTCGTTTAAAAAGAATGTTTTTGACACGATTCCT 513
||||||||||||||||||.|||||||||||||||||||.|.|||||||||
BL02741 464 CTATTATACAAAATCCTTTGTTTAAAAAGAATGTTTTTCAGACGATTCCT 513
BSNT_03322___ 514 TTTTATTTAAGTGATTGGTTACATTTTAACACCGTTATTTTTCC-----T 558
|||.|..|..||||.|||||.||.||.|||||.||.|||||.|| |
BL02741 514 TTTCAGCTGTGTGAATGGTTTCACTTCAACACGGTCATTTTCCCGACGGT 563
BSNT_03322___ 559 TCCTCAAATGGGTTTCTTTACGGCATTTCAGTGAAACGCTT------TTC 602
| .||.|.|||| |||||||..|.||.||.|||||||| ||.
BL02741 564 T----GAAGGCGTTT-TTTACGGTGTGTCTGTCAAACGCTTCACCAGTTT 608
BSNT_03322___ 603 AAAGGCGGAGGAAAGGATAAGGCTGGGAAAGCAGCTGTCTCAAT------ 646
|| ||||||||||.|.|||.||.||| ||||
BL02741 609 AA------AGGAAAGGATCAAGCTCGGCAAG---------CAATTAAGCG 643
BSNT_03322___ 647 ---TGCTGTTCAAGCCAGAATTGTTCTCCTCTTTTTATCACTTTTTGCAC 693
|||||||...|||.||..|.|||.||..|||||.|||.||| ||
BL02741 644 AGCTGCTGTTTTCGCCTGAGCTTTTCCCCGGTTTTTTTCATTTT----AC 689
BSNT_03322___ 694 A-CA---GTGCCGCACACAGGTTCCCGTTTTGATATGGAAAAGATGATC- 738
| || ||.|||||.||.||.||.||.|||||||||| |..|.||..|
BL02741 690 ATCATGTGTTCCGCATACCGGGTCGCGCTTTGATATGG-AGCGCTGGGCA 738
BSNT_03322___ 739 GGGATTACAAAAAGAACATCTCCTATGCTAAGGACATGCTA-CCCTGAGT 787
|||.|||.||..|||||.||.||..|..|.||.||.||.|| ||| ||
BL02741 739 GGGGTTAAAATCAGAACCTCGCCGTTTTTGAGAACGTGTTATCCC---GT 785
BSNT_03322___ 788 TAAT--CCACTCATTAGACGGAACGAAAACAGATTGGTTTC----ATGGA 831
|..| |||.||||||||||||...|||...|||||||||| | |||
BL02741 786 TGTTGCCCATTCATTAGACGGATTAAAATGCGATTGGTTTCGCGGA-GGA 834
BSNT_03322___ 832 AAGA-------------TAAAGA--AAACGTTCTTTAGGCGCGAGGAATT 866
|||| .||||| ||| ||.|
BL02741 835 AAGAGGGAGGCGATGTTCAAAGATGAAA------------------AACT 866
BSNT_03322___ 867 GCCGAAGCAGATTGAATTGACAGACTGGTATTTACATAAAAAG-CGCCAG 915
||||||...|||.|||.|.||.||.||||||||.|| |||||| .|.|||
BL02741 867 GCCGAAAACGATCGAAATCACCGATTGGTATTTTCA-AAAAAGAAGGCAG 915
BSNT_03322___ 916 CTTCATGCGCTTTTTGCGGTGGAGCAGTGGCTGAAAAAATAA------- 957
||.||.||..|.|||.||.|||||||.|||||| |||||
BL02741 916 CTGCAGGCATTGTTTTCGCTGGAGCATTGGCTG----AATAAGAGGTGA 960
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