Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03317 and BL02739
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence dna-align/BSNT_03317___yppE.1.5803.seq
# -bsequence dna-align/BL02739.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03317___yppE-BL02739.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03317___yppE-BL02739.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03317___yppE
# 2: BL02739
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 243/426 (57.0%)
# Similarity: 243/426 (57.0%)
# Gaps: 108/426 (25.4%)
# Score: 557.5
#
#
#=======================================
BSNT_03317___ 1 -TTGCTATCACAAACTTTGCTGGAAATGACCGAGCAAATGATTGAAGTTG 49
|.|.|| |||||.||.|.|| .|| ||.|| ||.|.||||.||...|
BL02739 1 TTGGATA-CACAATCTCTTCT---TAT-ACAGA-CACAGGATTTAATCCG 44
BSNT_03317___ 50 C--TGAAAAAGGCGC---TGATCGGTATCAGGAAGGGAAAA--------- 85
| ||.|||||..|| .||.||.||| ||.|||||||||
BL02739 45 CCTTGTAAAAGAAGCGGAAGAACGATAT-AGAAAGGGAAAAGAGGAAGGG 93
BSNT_03317___ 86 ACAGTAATCATTCTTATGATTTTTTTGAGACGATAAAGCCTGCAGTTGAA 135
||.|.| ||.||||||||.|||....|.||.|||.|.||.| |
BL02739 94 ACGGAA--------TACGATTTTTTCGAGGTTGTCAAACCTTCTGTCG-A 134
BSNT_03317___ 136 GAG------------AATGATGAACTGGCTGCTCGCTGGGCAGAGGGTGC 173
||| |.|||..|.||||||| |.|.|.||..||
BL02739 135 GAGGTTCGAACAAACAGTGAAAAGCTGGCTG------GCGGAAAGCCTG- 177
BSNT_03317___ 174 TCTTGAATTGATAAAAGTCCGCCGGCCAAAATATGTGCAT----AAAGAG 219
|||| || ||.||.|.|...||||||||||| ||| .||||.
BL02739 178 TCTT--AT--ATCAAGGCCAATCGGCCAAAATA----CATTTACGAAGAA 219
BSNT_03317___ 220 CA----AA-----TTGAGG-----CCGTAAAGGATAATTTCCTGGAATTG 255
|| || |||||| .|| ||.||.|.||||.||.|
BL02739 220 CAGCTCAACTCGGTTGAGGAAAATGCG--AATGAAATTTTCATGCA---- 263
BSNT_03317___ 256 GTCCTTCAATCTTATGTTCATCATATTCATAAAAAACGATTCAAGGACAT 305
||||| || ||.|| || |.||||||||||||||.||.||.||..|
BL02739 264 GTCCT---AT-TTCTG--CA--AAATTCATAAAAAACGCTTTAAAGATCT 305
BSNT_03317___ 306 CACTGAGTCAGTCCTTTATACATTGC------ACGCAGTAAAGGATGAAA 349
.||.||.||.|||||.||.|| || |||.||.|.|.||| |.|
BL02739 306 GACGGAATCCGTCCTCTACAC---GCTCAAAAACGTAGAAGACGAT-ATA 351
BSNT_03317___ 350 TTGCAAGAGAAGACAGCCGG---TAA 372
|| ||.|||||| |||| |||
BL02739 352 TT--AAAAGAAGA---CCGGGCCTAA 372
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