Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03323 and BL02731
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence dna-align/BSNT_03323___recU.1.5803.seq
# -bsequence dna-align/BL02731___recU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03323___recU-BL02731___recU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03323___recU-BL02731___recU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03323___recU
# 2: BL02731___recU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 631
# Identity: 473/631 (75.0%)
# Similarity: 473/631 (75.0%)
# Gaps: 44/631 ( 7.0%)
# Score: 1776.5
#
#
#=======================================
BSNT_03323___ 1 GTGATTCGGTATCCTAACGGAAAAACATTTCAGCCG-AAACATTCGGTTT 49
||||||||.||.||.|||||.|||.|.|.||||||| ||||| .|.|..|
BL02731___rec 1 GTGATTCGTTACCCGAACGGCAAATCCTATCAGCCGAAAACA-GCTGCCT 49
BSNT_03323___ 50 CATCC---CAAAACAGTCAGAAAAGGGCC-CCGTCTTACAGTAATCGCGG 95
||||| |||| |||| ||| .|||.||.| ||||||||
BL02731___rec 50 CATCCTTGCAAA------AGAA----GCCGTCGTATTCC---AATCGCGG 86
BSNT_03323___ 96 AATGACCCTCGAAGATGACTTAAACGAAACGAATAAGTATTATCTGACAA 145
.||||||||||||||||||.|.||.||||||||||.||||||| |||
BL02731___rec 87 CATGACCCTCGAAGATGACCTGAATGAAACGAATATGTATTAT----CAA 132
BSNT_03323___ 146 ACCAA----ATTGCCGTTATACACAAAAAGCCGACACCTGTTCAAATTGT 191
.|..| |||||.||.||.||.|||||.|||||||||||.||.|||||
BL02731___rec 133 TCTCATTCGATTGCGGTCATCCATAAAAAACCGACACCTGTACAGATTGT 182
BSNT_03323___ 192 AAATGTCCATTATCCAAAAAGAAGTGCCGCAGTGATTAAAGAAGCTTACT 241
..|.|||.|||||||.||..||||.||.||.||.||.||||||||.||.|
BL02731___rec 183 CCAGGTCGATTATCCGAAGCGAAGCGCTGCGGTTATCAAAGAAGCATATT 232
BSNT_03323___ 242 TTAAACAATCATCGACAACAGACTACAATGGGATTTACAAAGGGCGGTAT 291
|.||.||.||.||.||.||.||.||.||||||.||||.|||||.||.||.
BL02731___rec 233 TCAAGCAGTCGTCAACTACTGATTATAATGGGGTTTATAAAGGCCGCTAC 282
BSNT_03323___ 292 ATTGATTTTGAGGCGAAAGAAACGAAAAACAAGACCTCTTTCCCCCTGCA 341
||.||||||||.|||||||||||.||.|.|...|||||.|||||.||.||
BL02731___rec 283 ATCGATTTTGAAGCGAAAGAAACAAAGAGCCGAACCTCGTTCCCGCTTCA 332
BSNT_03323___ 342 GAATTTTCATGACCATCAAATCGAGCATATGAAGCAGGTAAAGGCTCAAG 391
||||||.||.||.|||||.||||||||||||||||||||...|||.||||
BL02731___rec 333 GAATTTCCACGATCATCAGATCGAGCATATGAAGCAGGTTGTGGCGCAAG 382
BSNT_03323___ 392 ACGGTATTTGTTTTGTTATTATATCCGCTTTCGACCAGGTATATTTTTTG 441
||||.||||||||||||||.|||||||||||.||..|..|.|||||||||
BL02731___rec 383 ACGGCATTTGTTTTGTTATCATATCCGCTTTTGAAGAAATTTATTTTTTG 432
BSNT_03323___ 442 GAAGCCGATAAGCTGTTTTATTTCTGGGA-CAGAAAAGAAAAAAACGGCA 490
|||||.||.||..|.|||||||||||||| |.||||| |..|||||||||
BL02731___rec 433 GAAGCAGAAAAATTATTTTATTTCTGGGAGCGGAAAA-AGCAAAACGGCA 481
BSNT_03323___ 491 GAAAATCAATTCGAAAAGATGAGTTGGAAGAAACAGCTTATCCGATTTTT 540
|||||||.||.||||||||.|||.|..|.|||.|.|||.|.||.||||..
BL02731___rec 482 GAAAATCGATCCGAAAAGACGAGCTTCAGGAAGCCGCTCACCCCATTTCA 531
BSNT_03323___ 541 CTTGGATACGCACCCAGAATTGATTATATTAGTATTATTGAACAGCTTTA 590
|||||||||.|.||.||||||||||||||||..||||||||.|||.|.||
BL02731___rec 532 CTTGGATACTCGCCAAGAATTGATTATATTAAGATTATTGATCAGTTGTA 581
BSNT_03323___ 591 TTTTTCGCCATCATCTGGTGCGAAAGGTTGA 621
|||||||||||||| ||
BL02731___rec 582 TTTTTCGCCATCAT--------AA------- 597
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