Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03316 and BL02729
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence dna-align/BSNT_03316___yppF.1.5803.seq
# -bsequence dna-align/BL02729.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03316___yppF-BL02729.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03316___yppF-BL02729.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03316___yppF
# 2: BL02729
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 152/203 (74.9%)
# Similarity: 152/203 (74.9%)
# Gaps: 16/203 ( 7.9%)
# Score: 574.0
#
#
#=======================================
BSNT_03316___ 1 ATGAACGTATCATACTTAAGCAAACGTTTTGCAGAAATGAAGAAATATGA 50
||||||||||||||||||||.||..|||||||.||.|||||..|.|||||
BL02729 1 ATGAACGTATCATACTTAAGAAATTGTTTTGCCGAGATGAAACAGTATGA 50
BSNT_03316___ 51 AACAGACTGTATGAATAAACTGATGGACTTTGCCAAGTTCCTCTATATTC 100
.||||||||.|||||.|||||||||||.||.||.|||||..|.|||||.|
BL02729 51 GACAGACTGCATGAACAAACTGATGGATTTCGCTAAGTTTTTGTATATCC 100
BSNT_03316___ 101 AAGGACATCTCAGCAT--AACTGAGTTTCGTAACAGTATGAAGGTTCTCG 148
|.||||||||.| ||| ||| ||.|||||.|..||||||||.|||||.|
BL02729 101 AGGGACATCTGA-CATTAAAC-GAATTTCGCACAAGTATGAAAGTTCTTG 148
BSNT_03316___ 149 AAGCAAATGGAGCAGAAAGCCCGGCATATGAGATGAAT------------ 186
||||.|||||.|||.|...|||.||.|||||.||||||
BL02729 149 AAGCGAATGGCGCACAGCACCCTGCTTATGATATGAATACGGACGCCAGC 198
BSNT_03316___ 187 TAA 189
|||
BL02729 199 TAA 201
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