Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00325 and BL02721
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence dna-align/BSNT_00325___ybbK.1.5803.seq
# -bsequence dna-align/BL02721___ybbK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00325___ybbK-BL02721___ybbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00325___ybbK-BL02721___ybbK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00325___ybbK
# 2: BL02721___ybbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 314/474 (66.2%)
# Similarity: 314/474 (66.2%)
# Gaps: 39/474 ( 8.2%)
# Score: 987.5
#
#
#=======================================
BSNT_00325___ 1 ATGATTCTAGTCAGTTCCTGCCTTGGAGGCATTGAATGCAGATATAACGG 50
|||||.||.||.|||||.||.||.|..||..|.||||||.|.||||||||
BL02721___ybb 1 ATGATACTGGTAAGTTCATGTCTGGCCGGAGTGGAATGCCGCTATAACGG 50
BSNT_00325___ 51 CTCTCACGCAGC---GTCGGAGAAAATCAGAAAACTCGTCGATGAAAAGA 97
.||.|| |||| ||| ||.|||||||..||.|||||.||.|||||.|
BL02721___ybb 51 TTCGCA--CAGCTATGTC-GAAAAAATCAATAAGCTCGTTGAAGAAAAAA 97
BSNT_00325___ 98 AAGCAGTTATGGCTTGCCCTGAACTTCTCGGCGGCTTCTC-TACCCCACG 146
||||.||.||||||||.||.||.||.||||||||.|| || .||.|||.|
BL02721___ybb 98 AAGCGGTGATGGCTTGTCCCGAGCTGCTCGGCGGATT-TCAAACACCAAG 146
BSNT_00325___ 147 CGAACCCGCAGAAATCATAGGAGGCACCGGCGAGGATGTCCTCAATGGAA 196
.|||||.||.|||||.|||||.||.||.||.||.||.||..|..|.||.|
BL02721___ybb 147 GGAACCGGCCGAAATTATAGGCGGGACGGGAGAAGACGTTTTAGACGGCA 196
BSNT_00325___ 197 CAGCGAAAATCGTGACAGCTTCAGGAGAAGACGTCACAGAACTATATATG 246
.||||...|||..||||...||.|||.|.|||||.|||||.||||||.|.
BL02721___ybb 197 AAGCGGTGATCAAGACACAATCGGGAAATGACGTAACAGACCTATATGTA 246
BSNT_00325___ 247 GAAGGCGCCGCGA----AAACATTGGCTTACGCAAAAGAAATCAACGCTT 292
.||||.|| | |||||||||.....||||...|||||||.|||.
BL02721___ybb 247 AAAGGGGC----ATATCAAACATTGGAGATGGCAAGGCAAATCAAGGCTG 292
BSNT_00325___ 293 CTGCCGTCATATTAAAAGAAAACAGTCCATCTTGCGGAAGCGGTTTTATC 342
.|.|..||.|..|.||.||||||||.||.||||||||.|||.|...|||.
BL02721___ybb 293 ATACGATCGTGCTGAAGGAAAACAGCCCGTCTTGCGGCAGCAGCCATATA 342
BSNT_00325___ 343 TATAACGGCACATTCTCTGGCAAAAAAATCACCGGCAGCGGAGTAACCGC 392
||..|.||.|..|||||..||||||||||..||||||.|||..|.||.||
BL02721___ybb 343 TACGATGGAAGTTTCTCAAGCAAAAAAATAGCCGGCAACGGCCTTACGGC 392
BSNT_00325___ 393 CGCACTGTTAAAACAAGCGGGCTACCGCGTCATTTCGGA---------AA 433
.|||||..|.|||.|||..||||.|||.||.|||||.|| |.
BL02721___ybb 393 GGCACTTCTGAAAAAAGAAGGCTTCCGTGTGATTTCCGAACATCAAATAG 442
BSNT_00325___ 434 ACGAGCT-TAACGACATATTGTAA 456
||||||| ||.
BL02721___ybb 443 ACGAGCTGTAG------------- 453
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