Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00323 and BL02720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence dna-align/BSNT_00323___murQ.1.5803.seq
# -bsequence dna-align/BL02720___murQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00323___murQ-BL02720___murQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00323___murQ-BL02720___murQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00323___murQ
# 2: BL02720___murQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 984
# Identity: 627/984 (63.7%)
# Similarity: 627/984 (63.7%)
# Gaps: 138/984 (14.0%)
# Score: 1843.5
#
#
#=======================================
BSNT_00323___ 1 ATGTCAGAA-----CCATTAA---ACCTTCACCGTCTCACAACGGAATCA 42
||| ||| |||||.| .||| |.||.||.|||...
BL02720___mur 1 ATG---GAAAACAGCCATTTAGGTTCCT--------TAACGACCGAACGC 39
BSNT_00323___ 43 CGCAAT-----AGCCAAACAGTTGAAATCCACAAAGCAAACACTCTCGGC 87
|||||| |.||||.| ..||.|||.|.|||.|.||..|||..
BL02720___mur 40 CGCAATGAAAGATCCAAGC-----GCATTCACCAGGCAGAAACGATCGAT 84
BSNT_00323___ 88 ATCCTCAAAATGATCAACAACGAAGATATGAAA--GTCGCTGCAGCCGTT 135
||..|.|||||.||.||..|.||||||| ||| ||.||.|.|||.||.
BL02720___mur 85 ATGTTGAAAATCATGAATGATGAAGATA--AAACGGTAGCCGAAGCTGTA 132
BSNT_00323___ 136 CAAGAGGTTCTCCCCGACATCAAAACAGCTGTAGACTGCGCTTATGAATC 185
|||||.||..|.|||||..|.||.||.||.||.||||.|||....|..||
BL02720___mur 133 CAAGAAGTCTTGCCCGATGTTAAGACCGCCGTTGACTACGCCGTCGGGTC 182
BSNT_00323___ 186 GTTTCAAAATGGAGGCCGGCTCATATATACAGGCGCCGGCACAAGTGGCA 235
|||..|.||.||.||.|||.||||.||.|..||.|||||.|||||.||.|
BL02720___mur 183 GTTAAAGAAAGGGGGACGGATCATCTACATCGGTGCCGGTACAAGCGGGA 232
BSNT_00323___ 236 GACTCGGCGTCATGGATGCTGTTGAATGTCCTCCCACCTACAGCGTA--A 283
|.||||||||..|.|||||.|.||||||.||.||.||.|.||||.|| .
BL02720___mur 233 GGCTCGGCGTACTTGATGCAGCTGAATGCCCGCCGACATTCAGCATATCT 282
BSNT_00323___ 284 GCCCAGCTCAGGTCATCGGAATCATGGCTGGAGGCCCCGAAGCCTTTTTA 333
.||.|| || ||||||.||.|||||.||.||.||.....||| ||||.||
BL02720___mur 283 CCCGAG-TC-GGTCATAGGCATCATTGCAGGGGGAGAAAAAG-CTTTGTA 329
BSNT_00323___ 334 CAGGCAGCAGAGGGCATTGAAGACAGTGAAGAAGCAGGA--------GCT 375
|| |.|.|.|.||||.|..||||| |.||.|| ||.
BL02720___mur 330 CA--------ATGCCGTCGAAGGCGCTGAAG-ATCATGAGGCTTTTGGCA 370
BSNT_00323___ 376 GA--AGATTTAAGAAAC--ATACAGCTCACTTCA---AATGACACCGTCA 418
|| .||||| ||||.| .|| |.||| ||| |||||.|||||.|
BL02720___mur 371 GACGGGATTT-AGAAGCCGTTA-ACCTC---TCAAACAATGATACCGTAA 415
BSNT_00323___ 419 TTGCCATCGCAGCAAGCGGCCGCACACCCTACGCCGCAGGCGCCCT-AAG 467
|.|..|||||.||.||||||||.||.||.||||.|..||||||||| |||
BL02720___mur 416 TCGGAATCGCCGCCAGCGGCCGAACTCCGTACGTCCTAGGCGCCCTGAAG 465
BSNT_00323___ 468 ATACGCCCGCAAAGTCGGAGCACACACCATCGCCCTTACTTGTAATGAAA 517
||.|||...|||...||.||..|..||||..|.||.||.||.|||||||
BL02720___mur 466 -TATGCCAAGAAAACAGGTGCCAAGGCCATATCGCTGACATGCAATGAAA 514
BSNT_00323___ 518 ATTCCGCCATCAGCAAGGATGCGGATCACAGCATTGAGGTTGTCGTCGGA 567
|.||.||.||||||.|||..||.|||||||||||.||.||.||||||||.
BL02720___mur 515 ACTCGGCGATCAGCCAGGCGGCAGATCACAGCATAGAAGTAGTCGTCGGC 564
BSNT_00323___ 568 CCTGAGGCCATTACAGGATCAACACGTATGAAAGCCGCAACCGCTCATAA 617
|||||.|.||||.|.|||||.||..|.|||||||||||||||||||||||
BL02720___mur 565 CCTGAAGTCATTGCCGGATCGACGAGAATGAAAGCCGCAACCGCTCATAA 614
BSNT_00323___ 618 AATGATTCTAAACATGATATCTACCGCTGTAATGGTCAAAATCGGCAAGG 667
|||||||.||||||||||.||.||.||.|..|||.|||||||.||.||.|
BL02720___mur 615 AATGATTTTAAACATGATCTCAACGGCGGCCATGATCAAAATGGGGAAAG 664
BSNT_00323___ 668 TTTACGAAAACTTGATGGTAGACGTCAACGTCAGCAACAAAAAACTAAAA 717
|.||.||||||.|.||||||||.||.||.||.|||||..|.|||.||||.
BL02720___mur 665 TCTATGAAAACCTCATGGTAGATGTAAAAGTAAGCAATGACAAATTAAAG 714
BSNT_00323___ 718 GAACGCGCCATCAGCATTATCCAAAGCCTTACA--AACGCTTCATACGAC 765
||.||.||.|||.||||.|||||||...|.||| .|.|| ||.|.||.
BL02720___mur 715 GAGCGGGCGATCCGCATCATCCAAACGGTCACAGGTATGC--CAAATGAA 762
BSNT_00323___ 766 ACAGC----CA--GATACACTCTGGAACAAG-CCGATCATCACGTCAAAA 808
||||| || .|| ||||| |.| ||.||.|.||.|||||||
BL02720___mur 763 ACAGCGGCGCAAGCAT------TGGAA-ATGTCCAATAACCAAGTCAAAA 805
BSNT_00323___ 809 CAGCAATCGTCATGCTCAAAACAAGCACAGAT----------CAGAAACA 848
|.||.|||.|||||||.|||||||.|..|||| ||||||
BL02720___mur 806 CCGCCATCATCATGCTGAAAACAAACGAAGATGCAGCCGCTGCAGAAA-- 853
BSNT_00323___ 849 AGCAA-------AGACATTACTCGATGAAGCAAACGGTTTCATTGACAAA 891
|| |||.||.| |||| .||.| |||||.||.
BL02720___mur 854 ---AACTGCTGGAGAAATCA------GAAG---GCGAT---ATTGAAAAG 888
BSNT_00323___ 892 GCAATCGAACATTACCATCCATGA---------- 915
|| |.|..||||..||||
BL02720___mur 889 GC-------CCTATCCATTTATGAAAAATCTTAA 915
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