Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00322 and BL02719
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence dna-align/BSNT_00322___ybbH.1.5803.seq
# -bsequence dna-align/BL02719___ybbH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00322___ybbH-BL02719___ybbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00322___ybbH-BL02719___ybbH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00322___ybbH
# 2: BL02719___ybbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity: 580/921 (63.0%)
# Similarity: 580/921 (63.0%)
# Gaps: 117/921 (12.7%)
# Score: 1682.5
#
#
#=======================================
BSNT_00322___ 1 ATGGCCACAGGCGGTTTAGCGATCATCC--AATCAATGAAGCATAAGCTC 48
|||||..||||.||.||.|..|||||.| ||| |||...||.||..|.
BL02719___ybb 1 ATGGCTGCAGGAGGATTGGAAATCATTCAGAAT--ATGCTTCACAAATTG 48
BSNT_00322___ 49 CCTCCATCCGAGCGCAAACTTGCAGATTATATCCT----AGCCCATCCCC 94
||.|.|||.||.||.||.|||||.||.||.||..| | |.||||
BL02719___ybb 49 CCGCAATCTGAACGAAAGCTTGCCGAATACATTTTGAAAA----ACCCCC 94
BSNT_00322___ 95 ACAAAGCAATCGAAA---GCACGGTCAACGAAATCAGCGCCTTAGCCAAT 141
|| |..||||.|| ||||..|..|.||..|.|||.|.|..||.||.
BL02719___ybb 95 AC---GAGATCGTAAACGGCACCATTCAGGAGGTGAGCTCTTCGGCAAAG 141
BSNT_00322___ 142 TCAAGTGACGCTGCCGTCATCAGGCTCTGCAAATCACTCGGTTTAAAAGG 191
.||||.|..||.||.|..||..|||||||||||||..|.||..|.|||||
BL02719___ybb 142 ACAAGCGGGGCGGCGGCGATACGGCTCTGCAAATCTTTGGGGCTGAAAGG 191
BSNT_00322___ 192 ATTTCAAGATTTAAAAATGAGAGTAGCGGGCGATCTGGCAAAGCCTACGT 241
.|||||||||||||||||||||||.||.||.|||.|....|||||..|..
BL02719___ybb 192 CTTTCAAGATTTAAAAATGAGAGTCGCCGGTGATTTAATGAAGCCGTCTG 241
BSNT_00322___ 242 TTCAGGGCTACCGGGATATTGTTCCCCACGAGCCGCTGCCCTCCAT--TT 289
.||||||.|||||||||||.|..||.||.||||||||.|..||.|| ||
BL02719___ybb 242 ATCAGGGATACCGGGATATCGAACCGCAGGAGCCGCTCCATTCAATCGTT 291
BSNT_00322___ 290 CCGAAAAAACGGCCGGCAATGCCATTCAAGCCATTCAGGATAC--TTCAG 337
| |||||||..||.|||||.|.|||||.||.||||..||||| ||.|.
BL02719___ybb 292 C--AAAAAACAACCAGCAATTCGATTCAGGCGATTCGCGATACCTTTGAA 339
BSNT_00322___ 338 ACCTGATGGACTACAAAGAGCTTGAACGAGCGGTT----TCTCTGCTTCT 383
|.| ||.|||.||.||||.|||.||..||||.|| |.| |..|
BL02719___ybb 340 AAC--ATTGACCACGAAGAACTTCAAAAAGCGATTCAAATAT----TGAT 383
BSNT_00322___ 384 CAAAGCTCATACCGTGCATTTTATCGGCCTCGGGGCTTCCGGCATTGTCG 433
|||.||..|.||.||.||||||..|||..||||||||||.||.||.||||
BL02719___ybb 384 CAACGCAGAAACGGTTCATTTTTGCGGGATCGGGGCTTCAGGAATCGTCG 433
BSNT_00322___ 434 C-CAAGGACGCCCAGCAAAAGTGGCTTCGCATTCATAAACAAGCAACCGC 482
| ||| |||||||||||.||.|...|.|||||..|||||.|.||.|||||
BL02719___ybb 434 CACAA-GACGCCCAGCAGAAATTTTTGCGCATCAATAAAAAGGCCACCGC 482
BSNT_00322___ 483 GTTTACAGACACTCATCTTGTGGCATCTTTAATCGCAAATGC---AGATA 529
.||||..||.|..||||||||.||..|.||||||||.||||| .||.|
BL02719___ybb 483 TTTTAGTGATATGCATCTTGTTGCGACATTAATCGCCAATGCCGGCGAGA 532
BSNT_00322___ 530 AAGACGACATCGTATTCGCCATTTCGTTTTCAGGAGAGACACAGGAAATC 579
|.|||| |..|.||.||.||.||...|||||||||.||||||||||||
BL02719___ybb 533 ATGACG---TTCTGTTTGCTATATCCCATTCAGGAGAAACACAGGAAATC 579
BSNT_00322___ 580 ATTGAACTGTTTGCCA------------TGGCCAAGGAAAAAGGCATCAC 617
|||| |.|||||..||.|.||.||.|.
BL02719___ybb 580 ------------GCCAATGCAGTCAGGCTCGCCAAAAAACATGGTATTAA 617
BSNT_00322___ 618 AACGATCAGCCTCACACAATT----CAGTCAGACATCCGTCTCCGCACT- 662
|||.||..|.||.||.|..|| |||||.| |.|||.|..||.|
BL02719___ybb 618 AACCATTGGGCTGACGCGGTTGGGACAGTCTG----CTGTCGCTTCATTA 663
BSNT_00322___ 663 GGCTGATGTCCCTTTGTATACAGCCCAT--TCCAATGAAGCCTTGATTCG 710
.|| |||.||.|..||||||| ..||| ||.||||||||...|.||||
BL02719___ybb 664 AGC-GATATCGCCCTGTATAC--GTCATGCTCAAATGAAGCGCCGTTTCG 710
BSNT_00322___ 711 AAGTGCAGCCACTTCCTCCCGCCTCGCCCAGCTTTTTATAATTGATGTTT 760
.||.||.|||||.|||||.||..|..|.|||||||..||.|||||..|..
BL02719___ybb 711 CAGCGCCGCCACCTCCTCTCGTTTAACTCAGCTTTACATGATTGACTTAC 760
BSNT_00322___ 761 TGTTTTTAGGCATGGCGGCTGAGCAGTATGAAACGACAAC---CGGTTAT 807
||||||||||||||||.||.||||..||.| |.||||.| |.| |||
BL02719___ybb 761 TGTTTTTAGGCATGGCCGCAGAGCGCTACG--AGGACATCATTCAG-TAT 807
BSNT_00322___ 808 ATAGATAAAACGAGAGCAGCCAT--ACAATATGAGAATAAAATAAGGCAT 855
||.|||.||||.|.|||.||||| .||..|||.|||| |.||
BL02719___ybb 808 ATTGATCAAACAAAAGCGGCCATCCGCATGATGGGAAT----TTAG---- 849
BSNT_00322___ 856 CTTGAAGGGGAGGGGTTTTAA 876
BL02719___ybb 849 --------------------- 849
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