Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00320 and BL02718
See
Amino acid alignment /
Visit
BSNT_00320 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence dna-align/BSNT_00320___ybbF.1.5803.seq
# -bsequence dna-align/BL02718___ybbF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00320___ybbF-BL02718___ybbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00320___ybbF-BL02718___ybbF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00320___ybbF
# 2: BL02718___ybbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1432
# Identity: 976/1432 (68.2%)
# Similarity: 976/1432 (68.2%)
# Gaps: 128/1432 ( 8.9%)
# Score: 3143.0
#
#
#=======================================
BSNT_00320___ 1 ATGAGCAAAGAAAATAACTACCATCAT------CTCGCACAGAAAATCCT 44
||||||.|.||.||.||.| || ||.||| ||| .
BL02718___ybb 1 ATGAGCGATGAGAAAAAAT------ATGCCGGGCTGGCA-AGA------C 37
BSNT_00320___ 45 TGAGCT--------ATGCGGAGGAAAATCCAATATTTCTTC----AT-AT 81
|||..| || |||.|| ||..|.|..|.|| || ||
BL02718___ybb 38 TGATTTTACAACACAT-CGGCGG-----CCCGTCTAACGTCGCAGATCAT 81
BSNT_00320___ 82 ACGCATTGCATGACACGCCTGCGCATTACGCCT---TACGATGAAAGCAA 128
||.||.||.|||||.|||||||||||.|||||| .||..|.||| ||
BL02718___ybb 82 ACCCACTGTATGACGCGCCTGCGCATCACGCCTGTCAACAGTCAAA--AA 129
BSNT_00320___ 129 AGC-AGAT------GCTCAGGGTTTAAGAAAGCTTGACGGCGTATTGGGG 171
|.| |.|| |.||| ||| .||||||.|||||..|.||.
BL02718___ybb 130 ACCGACATCGACTCGATCA------AAG--CGCTTGAAGGCGTGATCGGC 171
BSNT_00320___ 172 GTCGTTGAAGCTGAAAC-CTTACAAATTATCCTCGGCACAGGAGTCGT-- 218
||.|||||.|..||||| ||| ||.|||||||||||||||||.||.||
BL02718___ybb 172 GTAGTTGAGGAGGAAACGCTT-CAGATTATCCTCGGCACAGGCGTTGTAC 220
BSNT_00320___ 219 --CA---ATCA----TGTTAC----AGCTGCTTTCTCAAAGCTCGTGTCA 255
|| |||| .||| | |||||||| ||| ||.
BL02718___ybb 221 AGCACGTATCAGACGAGTT-CGGGAAGCTGCTT----AAA-------TCC 258
BSNT_00320___ 256 GCAGAAGAAGGTGCCGATGTCAAAGAAGCTGCGGCCAAAAAGAAAGCCGA 305
||||||.|.|.| ||..|.||||||.|.||.||||||.|.|||||.||
BL02718___ybb 259 GCAGAACACGTT---GACTTAAAAGAATCCGCAGCCAAACATAAAGCGGA 305
BSNT_00320___ 306 TAT---CAATCGAAAAAACGCCACTCCTTTTAAACT-TTTCTTACGTAAA 351
.|| ||| .||||||||.||.|||||.||.|| |||| |.||...|
BL02718___ybb 306 GATTTCCAA---GAAAAACGCGACGCCTTTCAAGCTGTTTC-TCCGGCGA 351
BSNT_00320___ 352 ATTGCCAGCATTTTTATCCCTCTTATTCCCGCTCTAGTCGCTTCCGGTTT 401
||.||.|||||||||||.||.||.||.||||||.|.|||||.||.||.||
BL02718___ybb 352 ATCGCAAGCATTTTTATACCGCTGATCCCCGCTTTGGTCGCCTCAGGCTT 401
BSNT_00320___ 402 AATTACTGGGATTACCAAAGCAATTATTCAAGCAGGCTGGCTCTCTGCAG 451
.|||||.||.||.||||||||..||||.||.||.|||||||||.|.|.|.
BL02718___ybb 402 GATTACCGGAATCACCAAAGCCGTTATCCAGGCTGGCTGGCTCGCGGAAA 451
BSNT_00320___ 452 ACTCACAAATTGCGGTTATCCTGACAGTCATCGGATCAGGGCTGTTCACT 501
.||||||||..|||.||||..|.||.||.||.||.|||||.||.||.||.
BL02718___ybb 452 CCTCACAAACCGCGATTATTTTAACGGTAATAGGCTCAGGTCTATTTACG 501
BSNT_00320___ 502 TATCTCGGCATTCTCGTCGGTATTAACGCTTCGAAAGAATTTGGCGGGAC 551
|||.|.||.||.||.||.||.||.||..|..||||||||||.|||||..|
BL02718___ybb 502 TATTTGGGTATCCTGGTGGGGATCAATACGGCGAAAGAATTCGGCGGCTC 551
BSNT_00320___ 552 ACCCGCACTTGGGGCTTTGGCCGGGATCTTGATTATCAATCCGGAGATCG 601
.||||||||.||.|..||.|||||.||.||.||.||.||.|| ||
BL02718___ybb 552 CCCCGCACTCGGCGGATTAGCCGGTATTTTAATCATTAACCC------CG 595
BSNT_00320___ 602 C--------AAAAATCAGTTTATTTGGAGAAGAGCTTCTCCCGGGCAGGG 643
| |||..|||.|| ||.||.||||.||||.|.|||||..|.|
BL02718___ybb 596 CCGTTGGTGAAATTTCACTT--TTCGGTGAAGCGCTTTTGCCGGGACGCG 643
BSNT_00320___ 644 GAGGTCTGATCGGCGTCCTTTTCGCAGCCATATTCATTGCTTACACCGAA 693
|.|||.|.||||||.|..|.||||||||...|||.||.||||....||||
BL02718___ybb 644 GCGGTTTAATCGGCATTTTATTCGCAGCTGCATTTATCGCTTTTCTCGAA 693
BSNT_00320___ 694 CAA---TTTATTCGCCGTTTTATTCCTCAATCACTCGATATCATTGTCAC 740
.|| .|.|..|||| ||.|.|||||.||||||||.|||||..||||
BL02718___ybb 694 AAACGGGTCAGGCGCC---TTGTACCTCACTCACTCGACATCATCATCAC 740
BSNT_00320___ 741 ACCCACCGTTTCACTGTTAATCACCGGAATCGTAACGTATGTCGTATTTA 790
|||.||.||.||.||..|.|||||.||||||||.||.||.||.||.||.|
BL02718___ybb 741 ACCTACAGTCTCCCTTCTTATCACAGGAATCGTCACCTACGTTGTCTTCA 790
BSNT_00320___ 791 TGCCTTTAGGCGGATTCATCTCTGATGCTATTACATCCGGCCTTCTGTCC 840
|||||.|.|||||.||.||.||.||.||.|||||.||.||.|||||..||
BL02718___ybb 791 TGCCTGTCGGCGGCTTGATTTCCGACGCCATTACGTCAGGTCTTCTCGCC 840
BSNT_00320___ 841 ATCCTGGACATCGGCGGCATCGCTGCAGGCTTTATTCTGGGCGCAACCTT 890
|||.|.||..|.||.|||||....||.||||||.|.||||||||.|||||
BL02718___ybb 841 ATCTTAGATCTTGGGGGCATTATCGCCGGCTTTGTACTGGGCGCCACCTT 890
BSNT_00320___ 891 CCTTCCTCTCGTCGTAACCGGACTGCATCAAGGCTTGACGCCTGTGCACA 940
||||||.|||||||||||||||||.||||||||..||||.||.||.||.|
BL02718___ybb 891 CCTTCCGCTCGTCGTAACCGGACTTCATCAAGGACTGACACCCGTTCATA 940
BSNT_00320___ 941 TGGAACTGATCAATTCAATTGGCAATGATCCTCTGCTCCCTATTTTGGCT 990
|||||.|.|||||||||||.|||.||||.||.|||||.||.||||||||.
BL02718___ybb 941 TGGAATTAATCAATTCAATCGGCGATGACCCGCTGCTGCCGATTTTGGCC 990
BSNT_00320___ 991 ATGGGAGGTGCAGGACAGGTAGGCGCGGCCTTTGC---CGTTTTCGTGAA 1037
|||||.||.||||||||.||||||||.||.||||| |..|||| ||
BL02718___ybb 991 ATGGGGGGCGCAGGACAAGTAGGCGCCGCTTTTGCGATCTATTTC---AA 1037
BSNT_00320___ 1038 GACGAAAAAAACAACACTGAGGAAAGCAATCGCCGGCGGGCTTCCATCGG 1087
.|||||||||.|||..||.|..|.|||.||.||||||||.||.||.||.|
BL02718___ybb 1038 AACGAAAAAAGCAAAGCTAAAAAGAGCCATTGCCGGCGGACTGCCGTCAG 1087
BSNT_00320___ 1088 GACTGCTCGGCATTGGTGAACCGCTTATTTTCGGAGTCACGCTGCCGCTT 1137
|.|||||||||||.||.||||||||.||.|||||.||.||.||.|||||.
BL02718___ybb 1088 GCCTGCTCGGCATCGGCGAACCGCTCATATTCGGTGTAACCCTTCCGCTC 1137
BSNT_00320___ 1138 GGCCGTCCGTTTTTAACAGCATGTTTAGGAGCTGGAATCGGTGGTGCCTT 1187
||.||||||||||||||.||.||..|.||.||.|||.|.||.||.||.||
BL02718___ybb 1138 GGACGTCCGTTTTTAACCGCGTGCCTCGGGGCCGGAGTAGGCGGAGCATT 1187
BSNT_00320___ 1188 TCAAGCGTATTTTCAAGTAGCCACCATTGCGATTGGTGTCTCCGGACTGC 1237
||||||||||||..||.|.||.|||.|..||||.||.||.||.||.||.|
BL02718___ybb 1188 TCAAGCGTATTTCAAAATTGCGACCGTATCGATAGGCGTATCAGGGCTCC 1237
BSNT_00320___ 1238 CGCTTTCCTTTCTAG-TCCTGCCTTCGCAAATCATCCTGTATATCGTTGG 1286
|..|.||.|||.|.| ||.|.||..| |||.|..|..|||||||..|.||
BL02718___ybb 1238 CTTTGTCGTTTTTGGTTCATACCCAC-CAAGTTCTTTTGTATATTCTCGG 1286
BSNT_00320___ 1287 GCTCTTTATTTCCTACGCGGCCGGCTTTTTATTGACCTATGCATTCGGAT 1336
..|.|||||||||||.||.|||||||||.|.||.||.||..|.||.||.|
BL02718___ybb 1287 TTTGTTTATTTCCTATGCTGCCGGCTTTGTCTTAACATACTCCTTTGGTT 1336
BSNT_00320___ 1337 ATAAAGATGAAATGGCTTCTCAGTTCGATTAA 1368
..||.||.||.|||||...|.|.||.||||||
BL02718___ybb 1337 TCAAGGACGATATGGCAGTTGAATTTGATTAA 1368
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.