Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00347 and BL02703
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence dna-align/BSNT_00347___ybbT.1.5803.seq
# -bsequence dna-align/BL02703___glmM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00347___ybbT-BL02703___glmM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00347___ybbT-BL02703___glmM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00347___ybbT
# 2: BL02703___glmM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity: 1074/1353 (79.4%)
# Similarity: 1074/1353 (79.4%)
# Gaps: 12/1353 ( 0.9%)
# Score: 4220.0
#
#
#=======================================
BSNT_00347___ 1 ATGGGCAAGTATTTTGGAACAGACGGTGTAAGAGGTGTCGCCAATAGTGA 50
|||||||||||||||||.|||||||||||||||||.||.||.||.|||||
BL02703___glm 1 ATGGGCAAGTATTTTGGTACAGACGGTGTAAGAGGCGTGGCAAACAGTGA 50
BSNT_00347___ 51 GCTTACACCTGAGCTGGCCTTTAAAGTCGGACGTTTCGGCGGTTATGTGC 100
.||||||||||||||||||||||||||||||||.||.|||||.|||||.|
BL02703___glm 51 ACTTACACCTGAGCTGGCCTTTAAAGTCGGACGCTTTGGCGGATATGTCC 100
BSNT_00347___ 101 TGACAAAAGACAAACAACGTCCAAAAGTGCTGATAGGCCGCGATACACGC 150
|.||||||||.||..|.|||||.||.||.|||||.|||||.||.||.|||
BL02703___glm 101 TAACAAAAGATAAGGAGCGTCCCAAGGTTCTGATCGGCCGTGACACGCGC 150
BSNT_00347___ 151 ATCTCCGGCCATATGCTGGAGGGAGCCCTTGTCGCCGGACTTTTATCCAT 200
||.||.||.|||||||||||.||.||||||||.||.||.|||.|.||.||
BL02703___glm 151 ATTTCAGGGCATATGCTGGAAGGGGCCCTTGTAGCAGGCCTTCTTTCGAT 200
BSNT_00347___ 201 TGGCGCAGAAGTCATGCGCCTGGGTGTCATTTCTACACCAGGTGTATCTT 250
.||.||||||||||||||.||.||.||.|||||.||.||.||.||..|.|
BL02703___glm 201 AGGAGCAGAAGTCATGCGTCTCGGCGTGATTTCGACGCCCGGAGTCGCAT 250
BSNT_00347___ 251 ATTTGACAAAAGCGATGGACGCAGAGGCGGGCGTCATGATTTCCGCTTCT 300
|||||||.||.||.||||||||.||||||||.||.||||||||||||||.
BL02703___glm 251 ATTTGACGAAGGCTATGGACGCGGAGGCGGGTGTGATGATTTCCGCTTCC 300
BSNT_00347___ 301 CATAACCCAGTGCAGGATAACGGCATCAAATTCTTTGGGGGAGATGGATT 350
||.|||||.||.|||||.|||||.||.||.||.||.||.||.||.||.||
BL02703___glm 301 CACAACCCTGTCCAGGACAACGGAATTAAGTTTTTCGGCGGCGACGGCTT 350
BSNT_00347___ 351 TAAGCTTTCTGATGAACAAGAGGCTGAAATTGAGCGCCTGATGGACGAAC 400
|||||||||.||||||||.|||..||||||.|||||.||||||||..|.|
BL02703___glm 351 TAAGCTTTCCGATGAACAGGAGCTTGAAATCGAGCGTCTGATGGATCAGC 400
BSNT_00347___ 401 CTGAAGATAAGCTGCCAAGACCTGTCGGAGCAGACCTTGGACTTGTAAAC 450
|.||||||.|.||||||||.|||||.||.||.||.||.||..|.||.|||
BL02703___glm 401 CGGAAGATCACCTGCCAAGGCCTGTAGGCGCTGATCTGGGCATGGTGAAC 450
BSNT_00347___ 451 GATTATTTTGAAGGCGGACAAAAATATCTGCA-ATTCTTAAAACAGACAG 499
||.||.||||||||||||||.||||||.|||| .||||| ||.|||.|.|
BL02703___glm 451 GACTACTTTGAAGGCGGACAGAAATATTTGCAGTTTCTT-AAGCAGTCTG 499
BSNT_00347___ 500 CTGATGAAGATTTCACAGGCATTCATGTGGCATTGGACTGTGCCCATGGC 549
||||||||||.|||||||||||||||||.||..|.||||||||.||.||.
BL02703___glm 500 CTGATGAAGACTTCACAGGCATTCATGTCGCGCTTGACTGTGCGCACGGG 549
BSNT_00347___ 550 GCAACATCATCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGT 599
||.|||||.||..|||||||.|||||||||||.|||.|.||.||||||||
BL02703___glm 550 GCGACATCTTCGCTGGCGACCCACCTGTTTGCCGATCTTGACGCAGATGT 599
BSNT_00347___ 600 TTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTTG 649
.||.||.|||||||||||.|||||||||||||||||.||||||||.||.|
BL02703___glm 600 ATCGACGATGGGGACTTCTCCGAACGGATTAAACATCAATGACGGAGTCG 649
BSNT_00347___ 650 GTTCGACTCATCCCGAAGCGCT--CAGCGCGTTTGTCAAAGAGAAAAACG 697
|.||.||.||.||.|||||.|| || |..|||||.||.||.||....|
BL02703___glm 650 GATCAACCCACCCTGAAGCCCTGGCA--GAATTTGTGAAGGAAAAGGGAG 697
BSNT_00347___ 698 CGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTC 747
|.||..||||..|.|||||.|||||.||.|||||||||.|.||.||||||
BL02703___glm 698 CTGACGTCGGCATGGCGTTTGACGGGGATGGCGACCGCTTAATCGCTGTC 747
BSNT_00347___ 748 GATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTC 797
||.||||||||.|||||.|||||||||||.||||||||||||||||||.|
BL02703___glm 748 GACGAAAAAGGGAATATCGTAGACGGCGATCAAATCATGTACATATGCGC 797
BSNT_00347___ 798 AAAACATCTGAA-ATCAGAGGGCCGTTTAAAGGATGATACTTTGGTTTCA 846
.||..|..|||| |.| |||||.||..|.|.|||..||||..|.||.||.
BL02703___glm 798 GAAGTACTTGAAGAGC-GAGGGGCGCCTGACGGACAATACCGTTGTCTCC 846
BSNT_00347___ 847 ACCGTGATGAGCAACCTCGGCTTCTATAAGGCGCTCGAAAAAGAAGGCAT 896
||.|||||||||||||||||.|||||.||.|||||.|||...||||||||
BL02703___glm 847 ACGGTGATGAGCAACCTCGGTTTCTACAAAGCGCTTGAAGCGGAAGGCAT 896
BSNT_00347___ 897 CAAAAGCGTACAGACAGCTGTCGGCGACCGCTACGTAGTAGAAGCAATGA 946
.||||||||.||||||||.||||||||||||||.|||||.||.||.||||
BL02703___glm 897 TAAAAGCGTTCAGACAGCGGTCGGCGACCGCTATGTAGTGGAGGCGATGA 946
BSNT_00347___ 947 AAAAAGACGGCTACAACGTCGGCGGAGAGCAGTCAGGACATCTTATTTTC 996
||||.|.|||.|..|.|.||||||||||.|||||.|||||.||.||||||
BL02703___glm 947 AAAAGGGCGGATTTACCCTCGGCGGAGAACAGTCGGGACACCTGATTTTC 996
BSNT_00347___ 997 CTTGATTACAACACGACAGGGGACGGTTTATTGTCTGCTATTATGCTGAT 1046
|||||||||||.||||||||.|||||..|..|.|||||.||.||||||||
BL02703___glm 997 CTTGATTACAATACGACAGGCGACGGACTGCTTTCTGCGATCATGCTGAT 1046
BSNT_00347___ 1047 GAACACTTTGAAAGCAACAGGCAAGCCGCTGTCAGAGCTTGCAGCTGAAA 1096
||||||..|.|||...|||||||||||||||||.||||||||.||.||.|
BL02703___glm 1047 GAACACGATTAAAATGACAGGCAAGCCGCTGTCTGAGCTTGCGGCAGAGA 1096
BSNT_00347___ 1097 TGCAGAAGTTCCCGCAGCTGTTAGTCAATGTGAGAGTGACTGATAAATAT 1146
||||||||||.||||||||..|..|.|||||||.|||.||.||||||.||
BL02703___glm 1097 TGCAGAAGTTTCCGCAGCTCCTCTTGAATGTGAAAGTAACCGATAAACAT 1146
BSNT_00347___ 1147 AAAGTTGAA--GAAAATGAAAAAGTAAAAGCAGTTATTTCTGAAGTTGAA 1194
||||| || |||||.|||||.||||||||.||.||....||||||||.
BL02703___glm 1147 AAAGT--AACGGAAAACGAAAAGGTAAAAGCGGTCATCGAAGAAGTTGAG 1194
BSNT_00347___ 1195 AAAGAAATGAACGGCGACGGCCGGATTTTGGTGCGCCCTTCAGGAACTGA 1244
||.|||||||||||.||||||||.||..|.||||||||.||.||.||.||
BL02703___glm 1195 AAGGAAATGAACGGTGACGGCCGCATCCTTGTGCGCCCATCCGGCACCGA 1244
BSNT_00347___ 1245 ACCGCTCGTCCGTGTCATGGCTGAAGCGAAGACGAAAGAGCTGTGCGATG 1294
.|||||.|||||||||||||||||||||||.|||||.|||||.|||||..
BL02703___glm 1245 GCCGCTTGTCCGTGTCATGGCTGAAGCGAAAACGAAGGAGCTTTGCGAGA 1294
BSNT_00347___ 1295 AGTATGTCAATCGCATTGTTGAAGTCGTCCGGTCAGAAATGGGATTAGAG 1344
||||.||....|||||||..||.|||||.....|.|||||||||..||||
BL02703___glm 1295 AGTACGTAGGCCGCATTGCAGATGTCGTGAAAGCTGAAATGGGAGCAGAG 1344
BSNT_00347___ 1345 TAA 1347
|||
BL02703___glm 1345 TAA 1347
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