Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00347 and BL02703

See Amino acid alignment / Visit BSNT_00347 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence dna-align/BSNT_00347___ybbT.1.5803.seq
#    -bsequence dna-align/BL02703___glmM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00347___ybbT-BL02703___glmM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00347___ybbT-BL02703___glmM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00347___ybbT
# 2: BL02703___glmM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity:    1074/1353 (79.4%)
# Similarity:  1074/1353 (79.4%)
# Gaps:          12/1353 ( 0.9%)
# Score: 4220.0
# 
#
#=======================================

BSNT_00347___      1 ATGGGCAAGTATTTTGGAACAGACGGTGTAAGAGGTGTCGCCAATAGTGA     50
                     |||||||||||||||||.|||||||||||||||||.||.||.||.|||||
BL02703___glm      1 ATGGGCAAGTATTTTGGTACAGACGGTGTAAGAGGCGTGGCAAACAGTGA     50

BSNT_00347___     51 GCTTACACCTGAGCTGGCCTTTAAAGTCGGACGTTTCGGCGGTTATGTGC    100
                     .||||||||||||||||||||||||||||||||.||.|||||.|||||.|
BL02703___glm     51 ACTTACACCTGAGCTGGCCTTTAAAGTCGGACGCTTTGGCGGATATGTCC    100

BSNT_00347___    101 TGACAAAAGACAAACAACGTCCAAAAGTGCTGATAGGCCGCGATACACGC    150
                     |.||||||||.||..|.|||||.||.||.|||||.|||||.||.||.|||
BL02703___glm    101 TAACAAAAGATAAGGAGCGTCCCAAGGTTCTGATCGGCCGTGACACGCGC    150

BSNT_00347___    151 ATCTCCGGCCATATGCTGGAGGGAGCCCTTGTCGCCGGACTTTTATCCAT    200
                     ||.||.||.|||||||||||.||.||||||||.||.||.|||.|.||.||
BL02703___glm    151 ATTTCAGGGCATATGCTGGAAGGGGCCCTTGTAGCAGGCCTTCTTTCGAT    200

BSNT_00347___    201 TGGCGCAGAAGTCATGCGCCTGGGTGTCATTTCTACACCAGGTGTATCTT    250
                     .||.||||||||||||||.||.||.||.|||||.||.||.||.||..|.|
BL02703___glm    201 AGGAGCAGAAGTCATGCGTCTCGGCGTGATTTCGACGCCCGGAGTCGCAT    250

BSNT_00347___    251 ATTTGACAAAAGCGATGGACGCAGAGGCGGGCGTCATGATTTCCGCTTCT    300
                     |||||||.||.||.||||||||.||||||||.||.||||||||||||||.
BL02703___glm    251 ATTTGACGAAGGCTATGGACGCGGAGGCGGGTGTGATGATTTCCGCTTCC    300

BSNT_00347___    301 CATAACCCAGTGCAGGATAACGGCATCAAATTCTTTGGGGGAGATGGATT    350
                     ||.|||||.||.|||||.|||||.||.||.||.||.||.||.||.||.||
BL02703___glm    301 CACAACCCTGTCCAGGACAACGGAATTAAGTTTTTCGGCGGCGACGGCTT    350

BSNT_00347___    351 TAAGCTTTCTGATGAACAAGAGGCTGAAATTGAGCGCCTGATGGACGAAC    400
                     |||||||||.||||||||.|||..||||||.|||||.||||||||..|.|
BL02703___glm    351 TAAGCTTTCCGATGAACAGGAGCTTGAAATCGAGCGTCTGATGGATCAGC    400

BSNT_00347___    401 CTGAAGATAAGCTGCCAAGACCTGTCGGAGCAGACCTTGGACTTGTAAAC    450
                     |.||||||.|.||||||||.|||||.||.||.||.||.||..|.||.|||
BL02703___glm    401 CGGAAGATCACCTGCCAAGGCCTGTAGGCGCTGATCTGGGCATGGTGAAC    450

BSNT_00347___    451 GATTATTTTGAAGGCGGACAAAAATATCTGCA-ATTCTTAAAACAGACAG    499
                     ||.||.||||||||||||||.||||||.|||| .||||| ||.|||.|.|
BL02703___glm    451 GACTACTTTGAAGGCGGACAGAAATATTTGCAGTTTCTT-AAGCAGTCTG    499

BSNT_00347___    500 CTGATGAAGATTTCACAGGCATTCATGTGGCATTGGACTGTGCCCATGGC    549
                     ||||||||||.|||||||||||||||||.||..|.||||||||.||.||.
BL02703___glm    500 CTGATGAAGACTTCACAGGCATTCATGTCGCGCTTGACTGTGCGCACGGG    549

BSNT_00347___    550 GCAACATCATCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGT    599
                     ||.|||||.||..|||||||.|||||||||||.|||.|.||.||||||||
BL02703___glm    550 GCGACATCTTCGCTGGCGACCCACCTGTTTGCCGATCTTGACGCAGATGT    599

BSNT_00347___    600 TTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTTG    649
                     .||.||.|||||||||||.|||||||||||||||||.||||||||.||.|
BL02703___glm    600 ATCGACGATGGGGACTTCTCCGAACGGATTAAACATCAATGACGGAGTCG    649

BSNT_00347___    650 GTTCGACTCATCCCGAAGCGCT--CAGCGCGTTTGTCAAAGAGAAAAACG    697
                     |.||.||.||.||.|||||.||  ||  |..|||||.||.||.||....|
BL02703___glm    650 GATCAACCCACCCTGAAGCCCTGGCA--GAATTTGTGAAGGAAAAGGGAG    697

BSNT_00347___    698 CGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTC    747
                     |.||..||||..|.|||||.|||||.||.|||||||||.|.||.||||||
BL02703___glm    698 CTGACGTCGGCATGGCGTTTGACGGGGATGGCGACCGCTTAATCGCTGTC    747

BSNT_00347___    748 GATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTC    797
                     ||.||||||||.|||||.|||||||||||.||||||||||||||||||.|
BL02703___glm    748 GACGAAAAAGGGAATATCGTAGACGGCGATCAAATCATGTACATATGCGC    797

BSNT_00347___    798 AAAACATCTGAA-ATCAGAGGGCCGTTTAAAGGATGATACTTTGGTTTCA    846
                     .||..|..|||| |.| |||||.||..|.|.|||..||||..|.||.||.
BL02703___glm    798 GAAGTACTTGAAGAGC-GAGGGGCGCCTGACGGACAATACCGTTGTCTCC    846

BSNT_00347___    847 ACCGTGATGAGCAACCTCGGCTTCTATAAGGCGCTCGAAAAAGAAGGCAT    896
                     ||.|||||||||||||||||.|||||.||.|||||.|||...||||||||
BL02703___glm    847 ACGGTGATGAGCAACCTCGGTTTCTACAAAGCGCTTGAAGCGGAAGGCAT    896

BSNT_00347___    897 CAAAAGCGTACAGACAGCTGTCGGCGACCGCTACGTAGTAGAAGCAATGA    946
                     .||||||||.||||||||.||||||||||||||.|||||.||.||.||||
BL02703___glm    897 TAAAAGCGTTCAGACAGCGGTCGGCGACCGCTATGTAGTGGAGGCGATGA    946

BSNT_00347___    947 AAAAAGACGGCTACAACGTCGGCGGAGAGCAGTCAGGACATCTTATTTTC    996
                     ||||.|.|||.|..|.|.||||||||||.|||||.|||||.||.||||||
BL02703___glm    947 AAAAGGGCGGATTTACCCTCGGCGGAGAACAGTCGGGACACCTGATTTTC    996

BSNT_00347___    997 CTTGATTACAACACGACAGGGGACGGTTTATTGTCTGCTATTATGCTGAT   1046
                     |||||||||||.||||||||.|||||..|..|.|||||.||.||||||||
BL02703___glm    997 CTTGATTACAATACGACAGGCGACGGACTGCTTTCTGCGATCATGCTGAT   1046

BSNT_00347___   1047 GAACACTTTGAAAGCAACAGGCAAGCCGCTGTCAGAGCTTGCAGCTGAAA   1096
                     ||||||..|.|||...|||||||||||||||||.||||||||.||.||.|
BL02703___glm   1047 GAACACGATTAAAATGACAGGCAAGCCGCTGTCTGAGCTTGCGGCAGAGA   1096

BSNT_00347___   1097 TGCAGAAGTTCCCGCAGCTGTTAGTCAATGTGAGAGTGACTGATAAATAT   1146
                     ||||||||||.||||||||..|..|.|||||||.|||.||.||||||.||
BL02703___glm   1097 TGCAGAAGTTTCCGCAGCTCCTCTTGAATGTGAAAGTAACCGATAAACAT   1146

BSNT_00347___   1147 AAAGTTGAA--GAAAATGAAAAAGTAAAAGCAGTTATTTCTGAAGTTGAA   1194
                     |||||  ||  |||||.|||||.||||||||.||.||....||||||||.
BL02703___glm   1147 AAAGT--AACGGAAAACGAAAAGGTAAAAGCGGTCATCGAAGAAGTTGAG   1194

BSNT_00347___   1195 AAAGAAATGAACGGCGACGGCCGGATTTTGGTGCGCCCTTCAGGAACTGA   1244
                     ||.|||||||||||.||||||||.||..|.||||||||.||.||.||.||
BL02703___glm   1195 AAGGAAATGAACGGTGACGGCCGCATCCTTGTGCGCCCATCCGGCACCGA   1244

BSNT_00347___   1245 ACCGCTCGTCCGTGTCATGGCTGAAGCGAAGACGAAAGAGCTGTGCGATG   1294
                     .|||||.|||||||||||||||||||||||.|||||.|||||.|||||..
BL02703___glm   1245 GCCGCTTGTCCGTGTCATGGCTGAAGCGAAAACGAAGGAGCTTTGCGAGA   1294

BSNT_00347___   1295 AGTATGTCAATCGCATTGTTGAAGTCGTCCGGTCAGAAATGGGATTAGAG   1344
                     ||||.||....|||||||..||.|||||.....|.|||||||||..||||
BL02703___glm   1295 AGTACGTAGGCCGCATTGCAGATGTCGTGAAAGCTGAAATGGGAGCAGAG   1344

BSNT_00347___   1345 TAA   1347
                     |||
BL02703___glm   1345 TAA   1347


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