Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00306 and BL02696
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00306___ybaS.1.5803.seq
# -bsequence dna-align/BL02696___ybaS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00306___ybaS-BL02696___ybaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00306___ybaS-BL02696___ybaS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00306___ybaS
# 2: BL02696___ybaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1004
# Identity: 659/1004 (65.6%)
# Similarity: 659/1004 (65.6%)
# Gaps: 109/1004 (10.9%)
# Score: 2086.5
#
#
#=======================================
BSNT_00306___ 1 ------------------------------------ATGCCGCTGTTGAC 14
|||||..||.||||
BL02696___yba 1 ATGCTTCAGACAATCAATAAAACACTTGGTAAGATTATGCCTTTGCTGAC 50
BSNT_00306___ 15 GCCGACTAGTGTGGT--GCTGGGCGTGCTGCTGTCTCAGTTTTTAAATGG 62
|||....||.||.|| || ||.||.|||||..|..|.|.|||||||||
BL02696___yba 51 GCCTTTAAGCGTTGTCAGC--GGAGTACTGCTTGCAGATTATTTAAATGG 98
BSNT_00306___ 63 G-TATGAATGGGC------TGTGCCTTGGATCTTTGCTTTTATTACGTTT 105
| | ||| ||||||.|||||.|||||.|||||.||||||
BL02696___yba 99 GCT-------GGCGAGTCTTGTGCCGTGGATTTTTGCGTTTATGACGTTT 141
BSNT_00306___ 106 GCAGGCAGTTTGAGCGCGAACTTTCAATCTTTG-AGACATGCATTGTCTC 154
||.|||||..||.|.||.||.|||||.||..|| |.||| ||..||.|||
BL02696___yba 142 GCCGGCAGCCTGGGAGCAAATTTTCAGTCGCTGAAAACA-GCGGTGGCTC 190
BSNT_00306___ 155 ATCCTCTCCCTATGATTCTTGCACTATTCGTTCTTCATATTTTCATGCCG 204
||||..|.||.|||.||||.||..||||.|||.|.||.||.||.|||||.
BL02696___yba 191 ATCCCTTGCCGATGTTTCTCGCTTTATTTGTTTTGCACATATTTATGCCT 240
BSNT_00306___ 205 CTTTTTGCTTGGGGCAGCGGCCATCTTATATTTAAAGGTGATCCTTTGAC 254
.||||.||.|||.|||..||.||||||.|.||||..||.|||.|.|||||
BL02696___yba 241 GTTTTGGCATGGAGCACGGGGCATCTTGTGTTTAGCGGGGATTCATTGAC 290
BSNT_00306___ 255 GATTAC-CGGTTTAACATTGGCTGTTGTGATTCCTACGGGGATTACAAGC 303
|||||| .||.|||.|.|||| ||||||.|||||.|||||.|||||.|||
BL02696___yba 291 GATTACAGGGCTTACCCTTGG-TGTTGTCATTCCGACGGGTATTACGAGC 339
BSNT_00306___ 304 TTGATTTGGGCAGCGATGTACAAAGGGAATGTCGGTTTGACACTTTCGAT 353
.||||||||||.||.|||||.|||||.||..|||||||.||.||.||.||
BL02696___yba 340 ATGATTTGGGCTGCAATGTATAAAGGTAACATCGGTTTAACCCTGTCAAT 389
BSNT_00306___ 354 TATTTTAATTGATACTGTGCTGTCACCGCTAATCGTACCGCTGAGTCTTT 403
|||||||.|.||.||..|.||.||.||..|.||.||.||..|.|||||||
BL02696___yba 390 TATTTTAGTGGACACGATTCTTTCGCCTTTTATTGTTCCATTCAGTCTTT 439
BSNT_00306___ 404 CATTGCTGGCCGGCGCTCAGGTTCACATGGATGTGTGGGGAATGATGAAA 453
|..|..|||||||.||.||.|||.|.||||||||....||.||||||||.
BL02696___yba 440 CCATCTTGGCCGGGGCGCATGTTGAAATGGATGTCATCGGCATGATGAAG 489
BSNT_00306___ 454 GGTCTGATTGTAATGGTCGTGATTCCTTCTTTTTTGGGCATGCTGTTTAA 503
||..|..|||.||||.|.||||||||||||||.|||||.|||||..|.||
BL02696___yba 490 GGGTTAGTTGGAATGATTGTGATTCCTTCTTTATTGGGAATGCTCGTCAA 539
BSNT_00306___ 504 TCAGATGTCATCTCCAGAAAGAAC--TGCGTCTGTGAGC--AGTGCGCTG 549
|||..|.|||.|.||.||..|.|| ||||..|..|.|| |.||.|||
BL02696___yba 540 TCAATTTTCAACGCCGGAGCGGACAGTGCGATTAAGCGCAAATTGTGCT- 588
BSNT_00306___ 550 TCGCCTTTTTCAAA-----GCTTTGCTTGATGGCAGTGATTGCGATTAAC 594
||.|||||.|| |.||.|| .||.||..|.|||||||||
BL02696___yba 589 ---CCGTTTTCGAAAGTCGGGTTAGC-----CGCCGTAGTGGCGATTAAC 630
BSNT_00306___ 595 AGTTCAGCGATTGCTCCTTATTTCAAATCCATTGATTT-GAGATTTGCAG 643
||.||.|.|.|.||||||||..|.|||..|.|.||||| .||.|||..|.
BL02696___yba 631 AGCTCGGTGGTCGCTCCTTACCTTAAAAACGTCGATTTAAAGTTTTTAAC 680
BSNT_00306___ 644 GAATAGCTGTAACGGTATTCTTTATCGCGTTAACAGGCTATGCC--GCTG 691
| |||||.||.|||||.||.||..|.||.||.|||||||| || .|.|
BL02696___yba 681 G-ATAGCCGTTACGGTCTTTTTGGTGGCATTTACAGGCTA--CCTGACAG 727
BSNT_00306___ 692 CTTGGCTGATCGGAAAAATGATGAAAAGGCGGCAAGAGGAAATAGTCTCT 741
||||||||||.|||....|||||||..|||..||.||||||||.||..||
BL02696___yba 728 CTTGGCTGATAGGACGGCTGATGAAGCGGCCCCAGGAGGAAATCGTGGCT 777
BSNT_00306___ 742 CTTATATTTACGGGAGGGATGAGGAATATTAGTGCCGGCGCAGTTCTTGC 791
.|.||.|||||.|||||.|||.||||||||||.||.|||||.||..|.||
BL02696___yba 778 TTAATTTTTACTGGAGGAATGCGGAATATTAGCGCGGGCGCTGTGTTGGC 827
BSNT_00306___ 792 CGTTACGTTCTTCCCGTCTCAGGTTGCCGTTCCTGTTGTGATCGGCATGC 841
|..||..||.||.|||.||||.||.||.||.||.|||||.||.|||||||
BL02696___yba 828 CACTAGCTTTTTTCCGCCTCAAGTGGCGGTGCCCGTTGTCATTGGCATGC 877
BSNT_00306___ 842 TGTTTCAGCAGATATTGGCTGCTTTGTTTGGCTATATGCT-----GAATC 886
||||.||.|||||..||||.||..|||||||..||.|||| |||.|
BL02696___yba 878 TGTTCCAACAGATTCTGGCCGCGCTGTTTGGGCATTTGCTTGCAAGAAGC 927
BSNT_00306___ 887 GTTTTGAATTAAAACC----AATGTTG--CAGAAAG-------------C 917
|...|||| ||||.| .|| ||| ||.|||| |
BL02696___yba 928 GAGCTGAA--AAAAGCGCATCAT-TTGGACAAAAAGACGAGTCTGCCCTC 974
BSNT_00306___ 918 ATAA 921
|||.
BL02696___yba 975 ATAG 978
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