Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00884 and BL02685
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence dna-align/BSNT_00884___cspC.1.5803.seq
# -bsequence dna-align/BL02685___cspC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00884___cspC-BL02685___cspC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00884___cspC-BL02685___cspC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00884___cspC
# 2: BL02685___cspC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 193/204 (94.6%)
# Similarity: 193/204 (94.6%)
# Gaps: 3/204 ( 1.5%)
# Score: 922.0
#
#
#=======================================
BSNT_00884___ 1 ATGGAACAAGGTACAGTTAAATGGTTTAATGCAGAAAAAGGTTTTGGCTT 50
|||||||||||||||||||||||||||||||||||||||||||||||.||
BL02685___csp 1 ATGGAACAAGGTACAGTTAAATGGTTTAATGCAGAAAAAGGTTTTGGATT 50
BSNT_00884___ 51 TATCGAACGCGAAAATGGAGACGATGTATTCGTACACTTTTCTGCAATCC 100
|||||||||.||||||||||||||||||||||||||||||||||||||||
BL02685___csp 51 TATCGAACGTGAAAATGGAGACGATGTATTCGTACACTTTTCTGCAATCC 100
BSNT_00884___ 101 AAAGTGACGGATTCAAATCTTTAGACGAAGGTCAAAAAGTATCGTTTGAC 150
||||.||||||||||||||.|||||||||||||||||||||.|.||||||
BL02685___csp 101 AAAGCGACGGATTCAAATCATTAGACGAAGGTCAAAAAGTAACATTTGAC 150
BSNT_00884___ 151 GTTGAGCAAGGTGCTCGTGGAGCTCAAGCTGCTAACGTTCAAAAA---GC 197
||||||||||||.||||.||||||||||||||||||||||||||| ||
BL02685___csp 151 GTTGAGCAAGGTCCTCGCGGAGCTCAAGCTGCTAACGTTCAAAAAACTGC 200
BSNT_00884___ 198 TTAA 201
||||
BL02685___csp 201 TTAA 204
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