Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04476 and BL02679
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:40
# Commandline: needle
# -asequence dna-align/BSNT_04476___mntB.1.5803.seq
# -bsequence dna-align/BL02679___mntB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04476___mntB-BL02679___mntB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04476___mntB-BL02679___mntB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04476___mntB
# 2: BL02679___mntB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 880
# Identity: 469/880 (53.3%)
# Similarity: 469/880 (53.3%)
# Gaps: 263/880 (29.9%)
# Score: 1107.0
#
#
#=======================================
BSNT_04476___ 1 ATG----------TTCCCTGT-TGAGCTTGATAATGTGACGGTTGCTTAT 39
||| ||.|| || ..||.||.||| .|||.|||||
BL02679___mnt 1 ATGAAACCCGCAATTACC-GTAAAAGATTTATA-------TGTTTCTTAT 42
BSNT_04476___ 40 CA----TAAAAAGC-CTGTACTGCAGGACATT------TCGCTGCAGGTG 78
|| ..|.|||| || |.||| |.||| ||.||..|
BL02679___mnt 43 CACGGCGCAGAAGCGCT---CCGCA--ATATTAATTTCTCACTCGA---- 83
BSNT_04476___ 79 CCTGAAGGAAAACTTAT---TGGCATTATCGGCCCAAACGGCGCGGGAAA 125
|.|||||| |.|| .|||||||||||.||.||||||||.|||||
BL02679___mnt 84 --TCAAGGAA---TGATGGCGGGCATTATCGGACCGAACGGCGCAGGAAA 128
BSNT_04476___ 126 ATCAACCTTGATCAAAACGATTCTCGGTC--TTG-TGCCCAGAGCTTCCG 172
||||||..||.|.|||.|.||.||| | ||| |.||.|.||.|...|
BL02679___mnt 129 ATCAACGCTGTTAAAATCCATGCTC---CAATTGATTCCAAAAGATAAAG 175
BSNT_04476___ 173 GAGACATC--TCTATT-----TACGG--CAAAGACTATAAGGATCAGCGG 213
|.|||.|| |||..| .||.| |||||| |.||.|.| |||
BL02679___mnt 176 GCGACGTCCGTCTGCTGGGAAAACCGCTCAAAGA-TGTACGCA--AGC-- 220
BSNT_04476___ 214 ACCAGAATCGGATATGTTCCGCAGCGCGGCTCGGTTGACTG----GGAT- 258
.|||||..|||||||||||||| .|.|| ||||
BL02679___mnt 221 ----AAATCGCCTATGTTCCGCAGCG----------AAATGATATGGATT 256
BSNT_04476___ 259 -----TTCCCCA-CAAGCGCGCTCGA---TGTCGTCCTAATGGGAAGATA 299
|||||.| ||| .|..||||| .|||.||||
BL02679___mnt 257 GGACGTTCCCGATCAA-TGTCCTCGACACCGTCATCCT------------ 293
BSNT_04476___ 300 CGGGA--------GAA-TCGGTTTATTAAAGAGG--CCAAAGAAAGCGGA 338
|||.| ||| ||||..| ||..|||.| |.|||.||.|| ||
BL02679___mnt 294 CGGCACGTATCCTGAACTCGGCCT-TTTCAGACGTCCGAAAAAACGC-GA 341
BSNT_04476___ 339 TGTGGAGATGGCGAAGGCCGCATTAGCA----------AAAGTCGGGATG 378
|...||...|||| ||.|| ||||||||||||
BL02679___mnt 342 TAAAGACTGGGCG----------TATCACTGTCTTGAGAAAGTCGGGATG 381
BSNT_04476___ 379 CTTGATTATGCGAAGAGGCAAATCAGCCAGCTGTCAGGCGGACAGCAGCA 428
..||..|||||.|||.|.||.|||.||.|.||||||||||||||||||||
BL02679___mnt 382 GCTGCATATGCCAAGCGTCAGATCGGCGAACTGTCAGGCGGACAGCAGCA 431
BSNT_04476___ 429 GCGGGTGTTTCTTGCCCGGGCACTCTGCCAGAACGCTGACATTTATTTTA 478
|||.||.|||||.|||.||||.|||..|||.||.||.||..|.|..|.|.
BL02679___mnt 432 GCGCGTTTTTCTCGCCAGGGCGCTCGCCCAAAAAGCAGAGCTGTTCTGTC 481
BSNT_04476___ 479 TGGATGAACCGTTTGCAGGTGTCGATG----CAGCGACGGAGCGCGCGAT 524
|.||.||||||||.|..|||.|.|||| .||.||.|.|
BL02679___mnt 482 TTGACGAACCGTTCGTCGGTATTGATGTGACAAGTGAAGAA--------- 522
BSNT_04476___ 525 TATGACGCTGTTGGCAGAACTC---AAAGAA---------AAAGGAAAAA 562
|||| |.|.|||.| || |||||| .|||||||.|
BL02679___mnt 523 -ATGA-----TCGTCAGCA-TCTTAAAAGAACTTCGTGATGAAGGAAAGA 565
BSNT_04476___ 563 CCGTGCTTGTCGTCCATCATGACCT-------GCAGACCGCCGAGGATTA 605
||||.||||||||||||||.||..| ||.|||.|| ||
BL02679___mnt 566 CCGTTCTTGTCGTCCATCACGATTTGAGCAAAGCGGACAGC-------TA 608
BSNT_04476___ 606 TTTC---GATTGGATCTTACTGCTTCATTTAAGAAAAATCGCT--TTC-- 648
.||| ||.|..||.||.||| ||.|||.| ||| |||
BL02679___mnt 609 CTTCAATGAATTAATTTTGCTG--------AACAAAGA--GCTGATTCAA 648
BSNT_04476___ 649 ---GGACCGG---CGGAAA------------ACGTGTTTACGATCGAAAA 680
||.||.| |.||.| ||||| |.||| ||||.
BL02679___mnt 649 AAAGGCCCTGTCTCCGACATCCTCAATCCCGACGTG---ATGAT-GAAAG 694
BSNT_04476___ 681 CCTGCAAAAAACATATGGAGGAAGGCTTACGTT-------TTTAAAAGAT 723
|||.|.||...|| ||||.|||| |..|||||
BL02679___mnt 695 CCTACGAATCTCA-----------GCTTCCGTTCCTGCAATCGAAAAG-- 731
BSNT_04476___ 724 AAAGTGCTGGCAGAAGGACATAAGGAGTGA 753
|.||||...|.||
BL02679___mnt 732 -AGGTGCGATCTGA---------------- 744
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