Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04476 and BL02679

See Amino acid alignment / Visit BSNT_04476 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence dna-align/BSNT_04476___mntB.1.5803.seq
#    -bsequence dna-align/BL02679___mntB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04476___mntB-BL02679___mntB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04476___mntB-BL02679___mntB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04476___mntB
# 2: BL02679___mntB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 880
# Identity:     469/880 (53.3%)
# Similarity:   469/880 (53.3%)
# Gaps:         263/880 (29.9%)
# Score: 1107.0
# 
#
#=======================================

BSNT_04476___      1 ATG----------TTCCCTGT-TGAGCTTGATAATGTGACGGTTGCTTAT     39
                     |||          ||.|| || ..||.||.|||       .|||.|||||
BL02679___mnt      1 ATGAAACCCGCAATTACC-GTAAAAGATTTATA-------TGTTTCTTAT     42

BSNT_04476___     40 CA----TAAAAAGC-CTGTACTGCAGGACATT------TCGCTGCAGGTG     78
                     ||    ..|.|||| ||   |.|||  |.|||      ||.||..|    
BL02679___mnt     43 CACGGCGCAGAAGCGCT---CCGCA--ATATTAATTTCTCACTCGA----     83

BSNT_04476___     79 CCTGAAGGAAAACTTAT---TGGCATTATCGGCCCAAACGGCGCGGGAAA    125
                       |.||||||   |.||   .|||||||||||.||.||||||||.|||||
BL02679___mnt     84 --TCAAGGAA---TGATGGCGGGCATTATCGGACCGAACGGCGCAGGAAA    128

BSNT_04476___    126 ATCAACCTTGATCAAAACGATTCTCGGTC--TTG-TGCCCAGAGCTTCCG    172
                     ||||||..||.|.|||.|.||.|||   |  ||| |.||.|.||.|...|
BL02679___mnt    129 ATCAACGCTGTTAAAATCCATGCTC---CAATTGATTCCAAAAGATAAAG    175

BSNT_04476___    173 GAGACATC--TCTATT-----TACGG--CAAAGACTATAAGGATCAGCGG    213
                     |.|||.||  |||..|     .||.|  |||||| |.||.|.|  |||  
BL02679___mnt    176 GCGACGTCCGTCTGCTGGGAAAACCGCTCAAAGA-TGTACGCA--AGC--    220

BSNT_04476___    214 ACCAGAATCGGATATGTTCCGCAGCGCGGCTCGGTTGACTG----GGAT-    258
                         .|||||..||||||||||||||          .|.||    |||| 
BL02679___mnt    221 ----AAATCGCCTATGTTCCGCAGCG----------AAATGATATGGATT    256

BSNT_04476___    259 -----TTCCCCA-CAAGCGCGCTCGA---TGTCGTCCTAATGGGAAGATA    299
                          |||||.| ||| .|..|||||   .|||.||||            
BL02679___mnt    257 GGACGTTCCCGATCAA-TGTCCTCGACACCGTCATCCT------------    293

BSNT_04476___    300 CGGGA--------GAA-TCGGTTTATTAAAGAGG--CCAAAGAAAGCGGA    338
                     |||.|        ||| ||||..| ||..|||.|  |.|||.||.|| ||
BL02679___mnt    294 CGGCACGTATCCTGAACTCGGCCT-TTTCAGACGTCCGAAAAAACGC-GA    341

BSNT_04476___    339 TGTGGAGATGGCGAAGGCCGCATTAGCA----------AAAGTCGGGATG    378
                     |...||...||||          ||.||          ||||||||||||
BL02679___mnt    342 TAAAGACTGGGCG----------TATCACTGTCTTGAGAAAGTCGGGATG    381

BSNT_04476___    379 CTTGATTATGCGAAGAGGCAAATCAGCCAGCTGTCAGGCGGACAGCAGCA    428
                     ..||..|||||.|||.|.||.|||.||.|.||||||||||||||||||||
BL02679___mnt    382 GCTGCATATGCCAAGCGTCAGATCGGCGAACTGTCAGGCGGACAGCAGCA    431

BSNT_04476___    429 GCGGGTGTTTCTTGCCCGGGCACTCTGCCAGAACGCTGACATTTATTTTA    478
                     |||.||.|||||.|||.||||.|||..|||.||.||.||..|.|..|.|.
BL02679___mnt    432 GCGCGTTTTTCTCGCCAGGGCGCTCGCCCAAAAAGCAGAGCTGTTCTGTC    481

BSNT_04476___    479 TGGATGAACCGTTTGCAGGTGTCGATG----CAGCGACGGAGCGCGCGAT    524
                     |.||.||||||||.|..|||.|.||||    .||.||.|.|         
BL02679___mnt    482 TTGACGAACCGTTCGTCGGTATTGATGTGACAAGTGAAGAA---------    522

BSNT_04476___    525 TATGACGCTGTTGGCAGAACTC---AAAGAA---------AAAGGAAAAA    562
                      ||||     |.|.|||.| ||   ||||||         .|||||||.|
BL02679___mnt    523 -ATGA-----TCGTCAGCA-TCTTAAAAGAACTTCGTGATGAAGGAAAGA    565

BSNT_04476___    563 CCGTGCTTGTCGTCCATCATGACCT-------GCAGACCGCCGAGGATTA    605
                     ||||.||||||||||||||.||..|       ||.|||.||       ||
BL02679___mnt    566 CCGTTCTTGTCGTCCATCACGATTTGAGCAAAGCGGACAGC-------TA    608

BSNT_04476___    606 TTTC---GATTGGATCTTACTGCTTCATTTAAGAAAAATCGCT--TTC--    648
                     .|||   ||.|..||.||.|||        ||.|||.|  |||  |||  
BL02679___mnt    609 CTTCAATGAATTAATTTTGCTG--------AACAAAGA--GCTGATTCAA    648

BSNT_04476___    649 ---GGACCGG---CGGAAA------------ACGTGTTTACGATCGAAAA    680
                        ||.||.|   |.||.|            |||||   |.||| ||||.
BL02679___mnt    649 AAAGGCCCTGTCTCCGACATCCTCAATCCCGACGTG---ATGAT-GAAAG    694

BSNT_04476___    681 CCTGCAAAAAACATATGGAGGAAGGCTTACGTT-------TTTAAAAGAT    723
                     |||.|.||...||           ||||.||||       |..|||||  
BL02679___mnt    695 CCTACGAATCTCA-----------GCTTCCGTTCCTGCAATCGAAAAG--    731

BSNT_04476___    724 AAAGTGCTGGCAGAAGGACATAAGGAGTGA    753
                      |.||||...|.||                
BL02679___mnt    732 -AGGTGCGATCTGA----------------    744


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