Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01961 and BL02673

See Amino acid alignment / Visit BSNT_01961 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence dna-align/BSNT_01961___cotZ.1.5803.seq
#    -bsequence dna-align/BL02673___cotZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01961___cotZ-BL02673___cotZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01961___cotZ-BL02673___cotZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01961___cotZ
# 2: BL02673___cotZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity:     316/490 (64.5%)
# Similarity:   316/490 (64.5%)
# Gaps:          80/490 (16.3%)
# Score: 987.5
# 
#
#=======================================

BSNT_01961___      1 --------ATG---AGCCAGAAAACATCAAGCTGCGTGCGTGAAGCTGTA     39
                             |||   |||| |||||       .||||||.|.|||||.||.
BL02673___cot      1 ATGACGAAATGTTCAGCC-GAAAA-------TTGCGTGTGCGAAGCCGTT     42

BSNT_01961___     40 GAAAATATTGAAGATCTGCAAAACGC---TGTTGAAGAAGACTGCCCGAC     86
                     |||||.|||.|.||||||||||||||   ||..|||||||.|||||||||
BL02673___cot     43 GAAAACATTCACGATCTGCAAAACGCCATTGAGGAAGAAGGCTGCCCGAC     92

BSNT_01961___     87 CGGCTGC-----CACTCTAAGCTTTTATCTGTAAGCCATTCG------TT    125
                     ..|||||     ||..||  |||||         .||.||||      ||
BL02673___cot     93 AAGCTGCTTCAGCAACCT--GCTTT---------CCCCTTCGAGACACTT    131

BSNT_01961___    126 AGGCGACACAGTGCCTTTTGCAATATT-TACA--TCAAAATCAACGCCAT    172
                     |||||||||..|.||.|||   ||.|| ||||  ||.||.||.|.|||.|
BL02673___cot    132 AGGCGACACCATTCCGTTT---ATTTTATACACTTCTAAGTCTAAGCCGT    178

BSNT_01961___    173 TAGTCGCCTTCGGAAATGTCGGCGAACTCGATAACGGC----CCTTGCTT    218
                     |.||.||.||.|||||||||||.|||||..|    |||    ||||||||
BL02673___cot    179 TCGTAGCGTTTGGAAATGTCGGAGAACTTCA----GGCAGGTCCTTGCTT    224

BSNT_01961___    219 TAATACAGTATTTTTCAGGGTCG-AAAGAGTGCATGGAAGCTGCGCAACA    267
                     .|..||.||.||||||||.||.| |||.|.|| |||...|||||||.|||
BL02673___cot    225 CAGCACCGTGTTTTTCAGAGTTGAAAACATTG-ATGACTGCTGCGCTACA    273

BSNT_01961___    268 CTGTCATTATTAATCGCATTTGACGAACACAAA----CACATTTTGGACT    313
                     .||..|.|.||.||.||.|||||.||    .||    |.|.||.|.||.|
BL02673___cot    274 TTGAGACTGTTGATTGCCTTTGATGA----TAATCGCCGCGTTCTCGATT    319

BSNT_01961___    314 TCAC---CGATAAAGATACGGTGTGTGAAGTGTTCCGACTCGAAAAAACG    360
                     ||||   .||||||||.|...|.||.||.||||||||..|.||||||||.
BL02673___cot    320 TCACAGAAGATAAAGACAAAATTTGCGATGTGTTCCGCTTGGAAAAAACA    369

BSNT_01961___    361 AACTACTGTATTGAAGTTGACTTAGACTGCTTCTGCGCAATCAACTGCTT    410
                     |..|.|||.||||||||.||..|.||.||||||||.||.|||.|.|||||
BL02673___cot    370 AGTTTCTGCATTGAAGTCGATCTGGAATGCTTCTGTGCGATCGAATGCTT    419

BSNT_01961___    411 AAATCCTCGATTAATCAATCGTACACATCATCAGCATTAA    450
                     ||||||...|.|.|||||||||.||         .|||||
BL02673___cot    420 AAATCCAAAACTGATCAATCGTTCA---------AATTAA    450


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