Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01963 and BL02672
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence dna-align/BSNT_01963___cotY.1.5803.seq
# -bsequence dna-align/BL02672___cotY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01963___cotY-BL02672___cotY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01963___cotY-BL02672___cotY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01963___cotY
# 2: BL02672___cotY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity: 373/507 (73.6%)
# Similarity: 373/507 (73.6%)
# Gaps: 36/507 ( 7.1%)
# Score: 1369.5
#
#
#=======================================
BSNT_01963___ 1 ATGAGCTGCGGAAAAACCCATGGCCGGCATGAGAACTGTGTATGCGATGC 50
|||||||||||||||..|||||||||||||||.||.||||||||||||||
BL02672___cot 1 ATGAGCTGCGGAAAACACCATGGCCGGCATGAAAATTGTGTATGCGATGC 50
BSNT_01963___ 51 AGTGGAAAAGATTTTAGCAGAGCAGGAGGCAGTTGAGG----AACA--GT 94
|||.|||.|||||.||..|||.|||||.||.||||||| |||| ||
BL02672___cot 51 AGTAGAACAGATTATAAAAGAACAGGATGCCGTTGAGGAAACAACAGCGT 100
BSNT_01963___ 95 GTCCGACTGGCTGCTATACAAACCTTTTGAATCCGACAATTGCAGGTAAA 144
|..||||..||||||.|...|||||..|||.||||||..||.|.||||||
BL02672___cot 101 GCTCGACAAGCTGCTTTGGCAACCTGCTGAGTCCGACGGTTTCCGGTAAA 150
BSNT_01963___ 145 GACACAATTCCGTTTCTCTTGTTTGATAAAAAAGGCGGATTGTTCTCCAC 194
|||||.||||||||.||.||||..||.||||||||||||.||||.||.||
BL02672___cot 151 GACACGATTCCGTTCCTTTTGTACGACAAAAAAGGCGGACTGTTTTCAAC 200
BSNT_01963___ 195 ATTCGGAAACGTGGGGGGATTTGTGGATGATATGCAATGCTTTGAATCCA 244
|||.|||||.||.||.||||||...|||||||||||.|||||.|||||.|
BL02672___cot 201 ATTTGGAAATGTCGGCGGATTTTCAGATGATATGCAGTGCTTCGAATCGA 250
BSNT_01963___ 245 TTTTCTTCCGCGTTGAA------AAATTATGCGACTGCTGCGCAACACTG 288
||||||||||.|..||| ||| ||.|||||.|||||.||.
BL02672___cot 251 TTTTCTTCCGGGCAGAAAGTCTCAAA------GATTGCTGTGCAACGCTT 294
BSNT_01963___ 289 TCTATTTTACGCCCTGTCGATGTCAAAGGCGATACCTTAAGTGTTTGCCA 338
||.||..|..|.|||||.||..|.||.|||||.||.|||||.||.|||||
BL02672___cot 295 TCAATCCTGAGGCCTGTGGACATAAACGGCGACACATTAAGCGTCTGCCA 344
BSNT_01963___ 339 CCCTTGCGACCCGGATTTCTTCGGGCTAGAAAAAACAGATTTCTGCATTG 388
.|||||.|||||.||.||.||||||||.|||||.||.||.||.|||||.|
BL02672___cot 345 TCCTTGTGACCCTGACTTTTTCGGGCTTGAAAAGACGGACTTTTGCATCG 394
BSNT_01963___ 389 AAGTGGATCTCGGA--TGCTTCTGCGCGATTCAGTGCCTGTCACCAGAGC 436
|.||.||..| || ||.|||||.||||||||.||.||||||||.||.|
BL02672___cot 395 AGGTTGACTT--GACTTGTTTCTGTGCGATTCAATGTCTGTCACCTGACC 442
BSNT_01963___ 437 TAGTTGACAGAACATCGC----CTCACAAAGATAAAAAGCATCATCACAA 482
|||||| ||||| |..||||| |||.|..||||.|||.|
BL02672___cot 443 TAGTTG-------ATCGCGCAGCAGACAAA---AAACACAATCACCACCA 482
BSNT_01963___ 483 TGGATAA 489
.||.|||
BL02672___cot 483 CGGTTAA 489
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