Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01977 and BL02662
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence dna-align/BSNT_01977___yjcF.1.5803.seq
# -bsequence dna-align/BL02662___yjcF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01977___yjcF-BL02662___yjcF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01977___yjcF-BL02662___yjcF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01977___yjcF
# 2: BL02662___yjcF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity: 293/442 (66.3%)
# Similarity: 293/442 (66.3%)
# Gaps: 41/442 ( 9.3%)
# Score: 908.0
#
#
#=======================================
BSNT_01977___ 1 TTGAAAGCAGTTATCGCAAAAAATGAAGAACAACTGAAAGATGCATTCTA 50
.||.||||.||.||.|..||.|||.||.||||.||..||||.||.||||.
BL02662___yjc 1 GTGGAAGCCGTCATTGTGAAGAATCAACAACAGCTTGAAGACGCCTTCTT 50
BSNT_01977___ 51 TGTAAGAGAAGAAGTCTTTGTCAAAGAACAAAACGTGCCTGCTGAAGAAG 100
|||.|||.|.|||||||||.||||.||.||..||||..|..|.|||||||
BL02662___yjc 51 TGTTAGAAAGGAAGTCTTTATCAAGGAGCAGCACGTATCACCGGAAGAAG 100
BSNT_01977___ 101 AAATTGACGAACTTGAAAATGAGTCAGAGCATATCGTCGTGTATGACGGT 150
||||.||..|.|||||..|.||.||....|||.|||||.|.|||||||..
BL02662___yjc 101 AAATGGATCATCTTGATCAGGAATCTTCACATCTCGTCATCTATGACGAA 150
BSNT_01977___ 151 GAAAAGCCTGTCGGTGCCGGAAGATGGC--------GCATGAAGGACGGC 192
.||.||||..||||.|| |||| ||.|| ..||||||
BL02662___yjc 151 AAAGAGCCGATCGGCGC-------TGGCCGGCTCCGGCTTG-TCGACGGC 192
BSNT_01977___ 193 TACGGCAAGTTAGAGCGGATTTGCGTACTGAAAAGCCACCGCTCAGCCGG 242
||||||||..|.||.||.||.||.||.|||||||||||||||||...|||
BL02662___yjc 193 TACGGCAAACTTGAACGAATCTGTGTGCTGAAAAGCCACCGCTCCCTCGG 242
BSNT_01977___ 243 TGTCGGCGGCATCATTATGAAAGCGCTCGAA---AAAGCCGC--GGCAGA 287
.||||||..|.|.||.||..|.|||||.||| .||||||| .|||
BL02662___yjc 243 CGTCGGCAACCTGATCATTCAGGCGCTTGAAGAGGAAGCCGCCAAGCA-- 290
BSNT_01977___ 288 CGGAGGCGCTTCCGGTTTCATTTTA-----AACGCGCAAACACAGGCTGT 332
|||||| ||.|||.|||| ||||||||.|||||||||||
BL02662___yjc 291 ---AGGCGC-----GTCTCAATTTATGCTGAACGCGCAGACACAGGCTGT 332
BSNT_01977___ 333 GCCGTTTTACAAGAAACACGGGTATCGCGTGCTTTCTGAAAAAGAATACC 382
.||.||||||.|.||||||||.|||...||..|.|||| |||||| ..
BL02662___yjc 333 TCCCTTTTACGAAAAACACGGCTATAAAGTCGTGTCTG---AAGAAT-TT 378
BSNT_01977___ 383 TC-GATGCCGGCATTCCGCACTTACAAATGATGAAGGACTGA 423
|| |||||....|||||.||..|..|||||.|.||..|.|.|
BL02662___yjc 379 TCAGATGCGAATATTCCCCATGTCAAAATGGTCAAAAAGTAA 420
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