Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03079 and BL02658
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_03079.1.5803.seq
# -bsequence dna-align/BL02658.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03079-BL02658.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03079-BL02658.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03079
# 2: BL02658
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 615
# Identity: 374/615 (60.8%)
# Similarity: 374/615 (60.8%)
# Gaps: 108/615 (17.6%)
# Score: 904.0
#
#
#=======================================
BSNT_03079 1 GTGGATTATTCTAAGG---AACTGAAAGATTTATTTTTAATGCAACAGTC 47
.||||| .||.|.|| || |.||.||.|||..|||.|||||.||...
BL02658 1 ATGGAT--ATCAACGGCTTAA-TCAACGAATTACATTTGATGCAGCAAAG 47
BSNT_03079 48 TTATGCTACACTTTTTTCCACTTTAAACAAAATTCAATCACGCGGAGACG 97
.|||||.|||.|.|||||...|.|.||.||..|.|||.|.|||||.||||
BL02658 48 CTATGCGACATTGTTTTCGGTTGTCAATAAGGTGCAAACCCGCGGTGACG 97
BSNT_03079 98 ATTATTAT-GAAAGCTTAACGTCGAGGCAATTTATGACGATGGTTGCCAT 146
|.|| ||| ||||..|||||..|.||||||...|||.||.|..|.||.||
BL02658 98 AATA-TATGGAAATATTAACTGCCAGGCAACACATGGCGCTCATCGCTAT 146
BSNT_03079 147 ACTGCATTTACCGGAAGAGGAAAC-GACA---TTCAAC-AACAT-TGCAA 190
...||||||.||| ...||||| |.|| || || ||.|| |.|||
BL02658 147 CGCGCATTTGCCG---CCTGAAACTGCCACGCTT--ACGAATATCTCCAA 191
BSNT_03079 191 AAAAATTAGGCACTTCAAAACAAAACATCAACA-------GACTTGTCAG 233
|||..|| |||||..|.|||||.|.|..||||| ||||
BL02658 192 AAAGCTT-GGCACAACCAAACAGACCGCCAACAAGCTGATGACT------ 234
BSNT_03079 234 CGGTATTGAAAAAAGAGGTTATGTC--ATCACTGTACCAAGTAAACGCGA 281
|||.|.|..||||.|||.|||||| |||| ||.|||||..||...||
BL02658 235 -GGTCTGGTCAAAAAAGGCTATGTCAAATCA--GTGCCAAGCCAAAAAGA 281
BSNT_03079 282 CAAGCG-TGCAGTTAAT-GTGAAGATTACTGATTCAG----GAAAGCGTG 325
|||.|| |.|| ||||| .|||| ||.||.|.|..|| |||||||
BL02658 282 CAAACGCTCCA-TTAATATTGAA-ATGACCGCTGAAGGAAAGAAAGCG-- 327
BSNT_03079 326 TCATGGAGGAATG---CGGTGAAAAAG--CGGTGTATTTTATGGCCGATC 370
.|||.|||.|| || |||| |.||.|||||..|||||||..
BL02658 328 --CTGGTGGAGTGTTCCG-----AAAGGTCCGTCTATTTCCTGGCCGACT 370
BSNT_03079 371 TATTTAAAGGC--TTTTCGACGGAAGAGCTGGAAACATTGTGGATTTTAT 418
|.|||.| || |||.|..|.||||||.|.|..|||||.|||....|.|
BL02658 371 TGTTTCA--GCAATTTACATCCGAAGAGGTTGCGACATTTTGGCGGCTGT 418
BSNT_03079 419 TGAAGAAACTGTACAGTTTTGATGGAGAAGAACAGGATGGTTTTGA--AG 466
||.|.||.||.|||.|||||||.||.||.|||||.||.|||||||| ||
BL02658 419 TGCAAAAGCTTTACCGTTTTGACGGTGAGGAACATGACGGTTTTGAGGAG 468
BSNT_03079 467 AAGACGCTGC------TGATTTTGAC-------ATT-----GA-ACAAAA 497
|| ||| |.|..|||.| ||| || |||.||
BL02658 469 AA-----TGCAAACATTCAGCTTGGCGTGGGGAATTCGTTAGATACAGAA 513
BSNT_03079 498 -------TCGAGACAATTTGA-AAACAAATTTATTGCAGGAATTCGCAAA 539
||| ||.||||||| ||||.....|| ||.|||| .|||
BL02658 514 AGGATTCTCG-GAGAATTTGAGAAACGCCGCTA-TGGAGGA-----GAAA 556
BSNT_03079 540 ACG--GAGAAAGTAA 552
||| || |||||.|
BL02658 557 ACGATGA-AAAGTGA 570
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