Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05982 and BL02652

See Amino acid alignment / Visit BSNT_05982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence dna-align/BSNT_05982___licT.1.5803.seq
#    -bsequence dna-align/BL02652___licT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05982___licT-BL02652___licT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05982___licT-BL02652___licT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05982___licT
# 2: BL02652___licT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 839
# Identity:     636/839 (75.8%)
# Similarity:   636/839 (75.8%)
# Gaps:          10/839 ( 1.2%)
# Score: 2355.5
# 
#
#=======================================

BSNT_05982___      1 ATGAAAATTGCGAAGGTGATCAACAATAATGTGATCAGCGTGGTCAATGA     50
                     .||||||||||.||.|||||||||||.|||||||||||.||..|.|||||
BL02652___lic      1 GTGAAAATTGCCAAAGTGATCAACAACAATGTGATCAGTGTTTTAAATGA     50

BSNT_05982___     51 ACAGGGGAAAGAATTGGTCGTCATGGGCAGGGGGCTCGCGTTTCAGAAAA    100
                     ||||||..|.|||||.||.||||||||||||||..||||.|||||.||||
BL02652___lic     51 ACAGGGTCAGGAATTAGTGGTCATGGGCAGGGGAATCGCTTTTCAAAAAA    100

BSNT_05982___    101 AGTCCGGCGATGATGTCGATGAAGCCCGCATTGAGAAAGTGTTCACGCTC    150
                     ||.|.|||||.|..||.||||||.|..|.||.|||||..|.||||.|||.
BL02652___lic    101 AGCCTGGCGAAGCGGTGGATGAATCGAGAATCGAGAAGATTTTCAGGCTT    150

BSNT_05982___    151 GATAACAAGGATGTATCAGAAAAGTTCAAAACCCTTTTGTATGATATACC    200
                     |||||.||.|||||||||||||.|||.||.||.||.|||.|.||.||.||
BL02652___lic    151 GATAATAAAGATGTATCAGAAAGGTTTAAGACGCTGTTGGACGAAATTCC    200

BSNT_05982___    201 GATCGAGTGTATGGAAGTATCCGAAGAGATTATCAGCTACGCAAAATTAC    250
                     .||.||.|.|||||||.|.||.|||||.||||||..|||.||.||||||.
BL02652___lic    201 AATTGAATTTATGGAAATGTCTGAAGAAATTATCTCCTATGCGAAATTAA    250

BSNT_05982___    251 AGCTCGGCAAAAAGCTCAACGACAGCATCTATGTGTCGCTGACCGACCAT    300
                     ||||||||||||||||.||.||||||||.|||||.|||||||||||||||
BL02652___lic    251 AGCTCGGCAAAAAGCTGAATGACAGCATTTATGTCTCGCTGACCGACCAT    300

BSNT_05982___    301 ATTAACTTTGCCATCCAGC-GCAACCAGAAAGGG-CTTGATATCAAAAAC    348
                     |||.|.||.|||.||.|.| |||  .|.|||||| ||.|||||.|||||.
BL02652___lic    301 ATTCATTTCGCCGTCGAACGGCA--TAAAAAGGGACTGGATATTAAAAAT    348

BSNT_05982___    349 GCCTTGCTGTGGGAAACAAAACGGCTGTACAAAGACGAATTTGCGATCGG    398
                     |||.||||.|||||.||.|||||||||||.|||||.||.||.||.|||||
BL02652___lic    349 GCCCTGCTTTGGGAGACGAAACGGCTGTATAAAGATGAGTTCGCCATCGG    398

BSNT_05982___    399 CAAAGAAGCGTTGGTTATGGTAAAAAACAAGACAGGTGTGTCTCTGCCAG    448
                     ||||||.|||.|||..||..|..||||.|||||.||.....||||.||.|
BL02652___lic    399 CAAAGAGGCGCTGGCCATCATTGAAAAGAAGACGGGGACAGCTCTTCCGG    448

BSNT_05982___    449 AGGATGAAGCAGGCTTTATTGCTCTGCATATTGTAAATGCCGAGCTGAAT    498
                     ||||||||||.|.||||||.||.||.|||||.|||||.||||||||||||
BL02652___lic    449 AGGATGAAGCCGCCTTTATCGCGCTCCATATCGTAAACGCCGAGCTGAAT    498

BSNT_05982___    499 GAAGAGATGCCCAATATTATCAACATTACAAAAGTCATGCAAGAGATTTT    548
                     |||||.|||||.||.||..||||.|||||.|||||||||||.||||||||
BL02652___lic    499 GAAGAAATGCCGAACATCGTCAATATTACGAAAGTCATGCAGGAGATTTT    548

BSNT_05982___    549 GAGTATTGTAAAATACCATTTTAAGATTGAATTCAACGAAGAATCGCTTC    598
                     .||.||.||.||.||.||.|||.|.||.|||||..|||||||||||||||
BL02652___lic    549 AAGCATCGTCAAGTATCACTTTCATATCGAATTTGACGAAGAATCGCTTC    598

BSNT_05982___    599 ACTATTATCGGTTCGTCACCCACTTAAAATTTTTCGCGCAACGTCTATTT    648
                     |||||||.||.|||.|.|||||.||.|||||||||||.||.||.||.||.
BL02652___lic    599 ACTATTACCGCTTCATTACCCATTTGAAATTTTTCGCCCAGCGGCTGTTC    648

BSNT_05982___    649 AACGGCACTCACATGGAAAGCCAGGACGATTTTTTGCTGGATACAGTGAA    698
                     |.|||.||..|.||||||||||.||||||.|||||..|.||.||.||.||
BL02652___lic    649 AGCGGAACCTATATGGAAAGCCGGGACGACTTTTTATTTGAAACCGTCAA    698

BSNT_05982___    699 AGAAAAGTATCATCGCGCGTATGAATGCACGAAGAAAATC---CAAACCT    745
                     |.|.|||||.|....|||.||||..||.||.||.||||||   ||   .|
BL02652___lic    699 AAATAAGTACCGGGACGCTTATGTTTGTACAAATAAAATCAGGCA---GT    745

BSNT_05982___    746 ACATTGAGCGGGAGTATGAGCACAAGCTCACAAGTGACGAGCTGCTGTAT    795
                     |.||.||....||.||.|..||..||||.||||..||.|||||.||||||
BL02652___lic    746 ATATCGAAAAAGAATACGGTCATCAGCTGACAAACGAAGAGCTTCTGTAT    795

BSNT_05982___    796 TTAACCATTCACATAGAAAGGGTAGTTAAACAAGCATAA    834
                     ||.||.|||||.||.||..|.||.|||.|.|||..|||.
BL02652___lic    796 TTGACGATTCATATCGAGCGAGTCGTTCATCAAAAATAG    834


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