Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00945 and BL02636
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence dna-align/BSNT_00945___ydfO.1.5803.seq
# -bsequence dna-align/BL02636___ydfO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00945___ydfO-BL02636___ydfO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00945___ydfO-BL02636___ydfO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00945___ydfO
# 2: BL02636___ydfO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity: 676/969 (69.8%)
# Similarity: 676/969 (69.8%)
# Gaps: 60/969 ( 6.2%)
# Score: 2375.5
#
#
#=======================================
BSNT_00945___ 1 ATGGCGAAAAAAACGATGGGAATTCATCATATTACAGCGATTGTCGGTCA 50
|||...||.|||||.|..|||||.|||||.|||||.|||||||||||.||
BL02636___ydf 1 ATGAAAAAGAAAACAAGCGGAATCCATCACATTACCGCGATTGTCGGCCA 50
BSNT_00945___ 51 CCCTCAAGAGAACACAGATTTCTACGCAGGAGTGCTTGGGCTTCGTTTGG 100
.||.||||||||....|||||.|||||.||.||.||.||..|.|||||.|
BL02636___ydf 51 TCCGCAAGAGAATGTCGATTTTTACGCTGGCGTTCTAGGTTTACGTTTAG 100
BSNT_00945___ 101 TCAAGCAAACTGTCAATTTTGATGACCCAGGTACGTATCATCTTTATTTT 150
|.||..|||||||.|||||||||||.||.||.||.||.||.||.|||||.
BL02636___ydf 101 TGAAAAAAACTGTTAATTTTGATGATCCGGGAACATACCACCTGTATTTC 150
BSNT_00945___ 151 GGGAATGAAGGCGGGAAGCCGGGAACAATCATTACCTTCTTTCCGTGGGC 200
||.|||||||||||.||.||||||||.||.|||||.||||||||.||||.
BL02636___ydf 151 GGTAATGAAGGCGGAAAACCGGGAACGATTATTACATTCTTTCCATGGGT 200
BSNT_00945___ 201 CGGAGCCCGCCAAGGCGTCATTGGAGACGGTCAAGTTGGCGTGACTTCGT 250
.||.||.||||.|||.|||||||||||.||.||.||.||.||.|||||.|
BL02636___ydf 201 GGGTGCTCGCCGAGGAGTCATTGGAGATGGCCAGGTGGGAGTTACTTCAT 250
BSNT_00945___ 251 ATGTCGTGCCGAAAGGGGCTATGGCATTTTGGGAAAAGAGACTAGAAAAG 300
|.|||||.||.|||||.||.|||||||||||||||||.|||.|.|.|||.
BL02636___ydf 251 ACGTCGTTCCTAAAGGCGCAATGGCATTTTGGGAAAACAGATTGGCAAAA 300
BSNT_00945___ 301 TTCAACGTTCCCTACACCAAAATCGAGCGCTTTGGGGAACAATATGTAGA 350
||.||..|.||.||.||.|||||..|.||.|||||.||..|.||..||||
BL02636___ydf 301 TTTAATTTGCCTTATACAAAAATGAACCGTTTTGGAGAGGAGTACTTAGA 350
BSNT_00945___ 351 ATTTGATGATCCTCATGGACTGCACTTAGAAATCGTGGAAAGAGAAGAAG 400
.||.|||||||||||||||||.||..|.|||||.||.|||||||||||||
BL02636___ydf 351 GTTCGATGATCCTCATGGACTTCATCTGGAAATTGTCGAAAGAGAAGAAG 400
BSNT_00945___ 401 GAGAGGCTAATACGTGGACTTTCGGAGATGTAACGCCCGATGTTGCCATT 450
|.||....||.|..||||...|.|||||..|.||.||.||....||.||.
BL02636___ydf 401 GGGAAAAGAACAGCTGGAAGATAGGAGAAATTACACCGGACAAAGCAATC 450
BSNT_00945___ 451 AAAGGTTTTGGGGGTGCAACCCTATTATCAGCGCAGCCTGACAAAACCGC 500
|||||.|||||.||.|||||.||.|||||....||.||.||.|||||.||
BL02636___ydf 451 AAAGGATTTGGCGGAGCAACACTTTTATCCAAACAACCGGAAAAAACGGC 500
BSNT_00945___ 501 TGAGCTTTTAGAAAACATCATGGGGCTGGAACGAGTCGGCAAAGAAGGAG 550
|||..|.||||||||..|.|||||.||.|||..|||.||..|||||||||
BL02636___ydf 501 TGAATTATTAGAAAAGGTTATGGGACTTGAAAAAGTTGGTGAAGAAGGAG 550
BSNT_00945___ 551 ACTTCGTTCGTTATCGTTCCGCCGGTGATATCGGAAATGTGATTGACCTT 600
|.||.||.||||.||||||..|.|||||||||||.|||.|.|||||..|.
BL02636___ydf 551 ATTTTGTACGTTTTCGTTCTTCTGGTGATATCGGGAATATAATTGATTTG 600
BSNT_00945___ 601 AAGTTAACGCCTATTGGCCGCGGGCAAATGGGGGCCGGAACGGTGCATCA 650
||.|||||..||||.|||.||||.|||||||||...||.||.||.||.||
BL02636___ydf 601 AAATTAACAACTATAGGCAGCGGACAAATGGGGATTGGTACAGTTCACCA 650
BSNT_00945___ 651 CATCGCTTGGCGGGCTAACGATGATGAAGATCAGTTAGATTGGCAAAGAT 700
.||.||.|||.|.||||..|||||..|.|||||.|||||.|||||||.||
BL02636___ydf 651 TATTGCCTGGAGAGCTATTGATGACAATGATCAATTAGAATGGCAAAAAT 700
BSNT_00945___ 701 ATATTGCTTCCCATGGATATGGTGTAACTCCTGTTCGGGATAGAAACTAC 750
||.||||.....||||.|||.||||.||.||.||.|..||.|||||.||.
BL02636___ydf 701 ATGTTGCAGAAAATGGTTATCGTGTTACACCCGTGCAAGACAGAAATTAT 750
BSNT_00945___ 751 TTTAATGCCATTTACTTCAGGGAACATGGGGAAATCCTGTTTGAAATCGC 800
|||||.||.|||||.||.||.|||||.|||||.||..|.||||||||.||
BL02636___ydf 751 TTTAACGCGATTTATTTTAGAGAACACGGGGAGATTTTATTTGAAATTGC 800
BSNT_00945___ 801 AACTGATCCCCCTGGCTTTGCACATGATGAAACACAGGATACAATGGGCG 850
|||.|||||.||.||.||.||.|||||||||.||||..|.||||||||.|
BL02636___ydf 801 AACAGATCCTCCAGGGTTCGCCCATGATGAATCACATCAAACAATGGGAG 850
BSNT_00945___ 851 AAAAACTGATGCTGCCTGTACAATATGAACCGCATCGCAC-ACAAATTGA 899
||.|..|.|||.||||.|..||.|||||| ||| |||.| ||
BL02636___ydf 851 AACAGTTAATGTTGCCGGCTCAGTATGAA--------CACTACAGA--GA 890
BSNT_00945___ 900 ACAAGGGCTGCTGCCGTTTGAAGTAAGAGAGTTAGATTGA---------- 939
||.|||.||| ||| |||||.|
BL02636___ydf 891 ------------GCAGTTAGAA-----AGA---AGATTAATTCCTATAAC 920
BSNT_00945___ 939 ------------------- 939
BL02636___ydf 921 AGTGAAGGCGCTGGATTAA 939
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