Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00944 and BL02635
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_00944___ydfN.1.5803.seq
# -bsequence dna-align/BL02635___ydfN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00944___ydfN-BL02635___ydfN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00944___ydfN-BL02635___ydfN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00944___ydfN
# 2: BL02635___ydfN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 637
# Identity: 451/637 (70.8%)
# Similarity: 451/637 (70.8%)
# Gaps: 29/637 ( 4.6%)
# Score: 1565.0
#
#
#=======================================
BSNT_00944___ 1 ATGGCTGAATTTATACAGTTAGTCAATGAAAGACGATCTGCAAGCAATTT 50
|||.|.||||||.||.|||||||.||.|||||||||||.|||||.|||||
BL02635___ydf 1 ATGACCGAATTTCTAGAGTTAGTAAAAGAAAGACGATCAGCAAGTAATTT 50
BSNT_00944___ 51 TCTTTCAGGTCATCCAATCACAAAAGAAGACCTCAATGAGATGTTTGATT 100
||||.|.||..||.||||..|..||.|.||.||.|||||.||.|||||..
BL02635___ydf 51 TCTTCCTGGATATTCAATTTCTGAACAGGAGCTTAATGAAATATTTGAAA 100
BSNT_00944___ 101 TGGTTGCATTGGCGCCATCGGCTTTTAATTTGCAGCATACAAAATATGTG 150
|.||...||||||.||.||.|||||||||||||||||||||||.|||.|.
BL02635___ydf 101 TTGTAAAATTGGCTCCCTCTGCTTTTAATTTGCAGCATACAAACTATATT 150
BSNT_00944___ 151 GCGGTTCTTGACCAGGACGTAAAGGAAAAG-------------CTGAAGC 187
|||||..|.|| |||| |||||| .||||||
BL02635___ydf 151 GCGGTGTTGGA--------TAAA-GAAAAGAAGAACATGTTGCATGAAGC 191
BSNT_00944___ 188 AGGCCGCAAATGGACAATATAAAGTGGTTAGCTCTTCTGCGGTTCTCTTG 237
| ||.|||||.|||||.||..|..|.|||||.||.||.||..||.|.
BL02635___ydf 192 A----GCTAATGGCCAATACAAGATCCTAAGCTCGTCGGCAGTCATCATC 237
BSNT_00944___ 238 GTATTAGGGGATAAGCAGGCATATCAACAAGCGGCTGATATCTATGAAGG 287
||.||.||.||.||..||||.|.|||.|||||....||.|||||.|||||
BL02635___ydf 238 GTTTTGGGTGACAAAAAGGCCTTTCATCAAGCAAAAGAAATCTACGAAGG 287
BSNT_00944___ 288 TTTAAAGGTATTGGGGATATTAAATAAGCAAGAGTATGACCACATGGTGC 337
||||||..|..|.||..||.|.|||||.|||||.|||||..|.|||||.|
BL02635___ydf 288 TTTAAAACTGCTCGGAGTACTTAATAAACAAGAATATGATGATATGGTTC 337
BSNT_00944___ 338 AAGACACCGTTTCGTTTTATGAAAACAGGGGAGAACAATTTAAGAGAGAT 387
|.||.||.|||||.||.|||.||..|||.||||||..||||.|.||.|||
BL02635___ydf 338 ACGATACGGTTTCTTTCTATCAATCCAGAGGAGAAGCATTTCAAAGGGAT 387
BSNT_00944___ 388 GAGGCGATAAGGAATGCTTCACTTTCTGCGATGATGTTTATGCTGAGTGC 437
||.||.||.|||||||..|||.|.|||.|.|||.|.||||||.||..|||
BL02635___ydf 388 GAAGCCATCAGGAATGGCTCATTATCTTCTATGCTCTTTATGATGGCTGC 437
BSNT_00944___ 438 TAAGGAAAAAGGCTGGGATACCTGCCCGATGATCGGCTTTGATGCGGAAG 487
|||.||||||||.||||||||.||.||.|||||.|||||||||.|..||.
BL02635___ydf 438 TAAAGAAAAAGGTTGGGATACTTGTCCCATGATTGGCTTTGATCCTCAAA 487
BSNT_00944___ 488 CCGTAAAACGGATTTTGAACATAGACGACCAATTTGAGGTTGTCATGATG 537
..||||||..|.|.|||||.|||.|.||.||||.||||||.|||||||||
BL02635___ydf 488 AGGTAAAAGAGGTATTGAATATAAATGAGCAATATGAGGTCGTCATGATG 537
BSNT_00944___ 538 ATTACGATTGGAAAAGAAAAAACAGAGAGCAGAAGACCGCGCGGCTACCG 587
||.||..||||.||.||||||..|||.|||||||.||||||.||.|...|
BL02635___ydf 538 ATCACCCTTGGGAAGGAAAAATTAGAAAGCAGAAAACCGCGGGGATTTAG 587
BSNT_00944___ 588 GAAGCCTGTGAATGAGTTTGTTGAGTATAT---GTAA 621
.||.|||||.|||||.|||||....||||| .|||
BL02635___ydf 588 AAAACCTGTAAATGAATTTGTAACCTATATCTCTTAA 624
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