Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01150 and BL02631
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence dna-align/BSNT_01150___yerP.1.5803.seq
# -bsequence dna-align/BL02631___swrC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01150___yerP-BL02631___swrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01150___yerP-BL02631___swrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01150___yerP
# 2: BL02631___swrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 3195
# Identity: 2605/3195 (81.5%)
# Similarity: 2605/3195 (81.5%)
# Gaps: 72/3195 ( 2.3%)
# Score: 10717.5
#
#
#=======================================
BSNT_01150___ 1 ATGAATCACGTTATTAATTTCGTTCTGAAAAACAAATTCGCCGTATGGCT 50
||||||....|.||||||||.||.||.||.|||||.|||||.||.|||||
BL02631___swr 1 ATGAATTCTATCATTAATTTTGTACTAAAGAACAAGTTCGCTGTGTGGCT 50
BSNT_01150___ 51 GATGACGATTATTGTAACGGCAGCCGGCTTGTATGCGGGTATGAATATGA 100
|||||||||||||||.||||..||||||.|.|||||||||.|.|||||||
BL02631___swr 51 GATGACGATTATTGTTACGGTTGCCGGCATTTATGCGGGTTTAAATATGA 100
BSNT_01150___ 101 AGCAAGAGTCTATTCCTGACGTGAACATGCCTTACTTGACGATCAGCACG 150
||||.||.||.||||||||.||||||||||||||.|||||.|||||||||
BL02631___swr 101 AGCAGGAATCGATTCCTGATGTGAACATGCCTTATTTGACCATCAGCACG 150
BSNT_01150___ 151 ACATATCCGGGTGCGACACCAAGCCAAGTGGCTGATGAAGTGACCAAACC 200
||||||||.||.||.||.||.|||||.||.|||||||||||.||.||.||
BL02631___swr 151 ACATATCCCGGAGCCACTCCGAGCCAGGTAGCTGATGAAGTCACAAAGCC 200
BSNT_01150___ 201 GGTTGAACAAGCCGTGCAGAACTTGGACGGTGTCAGTGTTGTGACGTCGA 250
||||||||||||||||||.||..|||||||.|||||.|||||||||||.|
BL02631___swr 201 GGTTGAACAAGCCGTGCAAAATCTGGACGGCGTCAGCGTTGTGACGTCCA 250
BSNT_01150___ 251 CGTCCTATGAAAACGCATCGTCGGTCATGATTGAATATGATTATGAGAAA 300
|.||.||||||||||||||.|||||.|||||||||||.||||||||.||.
BL02631___swr 251 CATCGTATGAAAACGCATCATCGGTGATGATTGAATACGATTATGAAAAG 300
BSNT_01150___ 301 GATATGGACAAAGCGAAAACAGAAGCAGCTGAAGCGTTAGAAAACGTCAA 350
|||||||||||||||||.||.|||||.||||||||.||.|..||..||.|
BL02631___swr 301 GATATGGACAAAGCGAAGACGGAAGCCGCTGAAGCATTGGCGAATCTCGA 350
BSNT_01150___ 351 CCTGCCTGATGACGCGAAGGATCCGGAG-ATTTCACGCTACAGCTTGAAT 399
.|||||.||..|.|||||.||.|| ||| |||||.|||||||||.|||||
BL02631___swr 351 TCTGCCGGACAATGCGAAAGAGCC-GAGCATTTCGCGCTACAGCATGAAT 399
BSNT_01150___ 400 TCATTCCCGATTCTGACGCTGAGCGTGTCCAGTGATAAAGATAATCTACA 449
||.|||||||||||..||||.||||||||||||||||||||..||||.||
BL02631___swr 400 TCCTTCCCGATTCTCGCGCTCAGCGTGTCCAGTGATAAAGACGATCTTCA 449
BSNT_01150___ 450 AGAGC-TGACGAAACAAGTGGAGGACAGCCTCGTTTCTAAACTTGAAGGC 498
| ||| ||||||||.|||||||.|||||||||.|..|.||.|||||||||
BL02631___swr 450 A-AGCTTGACGAAAAAAGTGGAAGACAGCCTCCTGACGAAGCTTGAAGGC 498
BSNT_01150___ 499 ATAGAAGGCGTTGCGTCCGTCCAAGTATCAGGCCAGCAGGTGGAAGAGGT 548
.|.||||||||.||.|||||.||..|.||.||.||||||||.|||||.||
BL02631___swr 499 CTTGAAGGCGTAGCTTCCGTTCAGCTTTCCGGTCAGCAGGTTGAAGAAGT 548
BSNT_01150___ 549 TGAATTCTCTTTCAAAGAAGACAAACTGAAGGAATACGGCCTTGATGAAG 598
.|||||.||.||.|||.||||||||.|||||.|||||||.|||||.||.|
BL02631___swr 549 CGAATTTTCATTTAAAAAAGACAAATTGAAGCAATACGGGCTTGACGAGG 598
BSNT_01150___ 599 ATACAGTCAAGCAAGTGATTCAAGGTTCAGATGTGACAACTCCGCTTGGA 648
|||||||||||||||||||||||||.||.||||||||.|||||||||||.
BL02631___swr 599 ATACAGTCAAGCAAGTGATTCAAGGATCTGATGTGACGACTCCGCTTGGG 648
BSNT_01150___ 649 TTGTACACATTCGGAAATGAAGAAAAATCTGTCGTCGTCAGCGGCGATAT 698
||||||||||||||.||.|||||||||||.||||||||||||||||||||
BL02631___swr 649 TTGTACACATTCGGCAAAGAAGAAAAATCGGTCGTCGTCAGCGGCGATAT 698
BSNT_01150___ 699 TGAAACAATTAAAGATTTGAAGAATATGAGAATCCCGACGGCATCTGCTT 748
.||.|||||||||||.|||||.|||||||||||.||..||||.|||||
BL02631___swr 699 CGACACAATTAAAGACTTGAAAAATATGAGAATTCCAGCGGCGTCTGC-- 746
BSNT_01150___ 749 CAAGTGCAGGCAGC-AGCGCAGCATCTCAAGCGGGTGCGCAGAGTGCTCA 797
.|.|||| || |||| |.|||||.||.|||||.|||||.||
BL02631___swr 747 ----CGGAGGC-GCAAGCG------CGCAAGCCGGAGCGCAAAGTGCGCA 785
BSNT_01150___ 798 AGCAGCCCA--------------AAGC----GCACA-AGCGGCAGCACAG 828
.||.||||| |||| ||||| ||| ||.|.|||.
BL02631___swr 786 GGCGGCCCAGGGGGCGCAGGCTCAAGCCGGGGCACAGAGC-GCCGGACAA 834
BSNT_01150___ 829 GCGCAGCAAAGCGCAAGCACAGCAGTGCCGACGGTCAAGCTTTCTGACAT 878
||.|||||||||| |.|.|||.||||||||.|||||.||||||||
BL02631___swr 835 GCTCAGCAAAGCG------CGGGAGTCCCGACGGTTAAGCTGTCTGACAT 878
BSNT_01150___ 879 TGCCACAATTAAAGATGTGAAAAAAGCTGAATCTGTTTCACGCACAAATG 928
.||.||.|||||||||||.||||||||.|||||..|||||||.||.||||
BL02631___swr 879 CGCAACGATTAAAGATGTCAAAAAAGCCGAATCCATTTCACGAACCAATG 928
BSNT_01150___ 929 GCAAAGACAGCATCGGCATCAATATCGTCAAAGCAAACGATGCGAATACG 978
|||||||||||||||||||||...||.|.|||||||||||.||.|||||.
BL02631___swr 929 GCAAAGACAGCATCGGCATCAGCGTCATTAAAGCAAACGACGCCAATACC 978
BSNT_01150___ 979 GTAGAGGTTGCCGACAATGTCAAAGCTGAGCT-GAAGAAGTTCAAAGAAG 1027
||.|||||.||||||||.||.||||||||.|| |||.|| ||||||.|||
BL02631___swr 979 GTCGAGGTAGCCGACAACGTAAAAGCTGAACTCGAACAA-TTCAAAAAAG 1027
BSNT_01150___ 1028 ACCATAAAGGCTTCAATTACAGCGCAACTCTCGACAT-------GGCGGA 1070
||||.|||||||||||.||||| |||||||| |||.||
BL02631___swr 1028 ACCACAAAGGCTTCAAATACAG-------CTCGACATACGATCAGGCCGA 1070
BSNT_01150___ 1071 GCCGATCACACAGTCAGTTGACACGATGTTAAGCAAAGCCATCTTCGGTG 1120
.||||||||..||||.||.||.||||||.|.||||||||.||.|||||.|
BL02631___swr 1071 ACCGATCACCGAGTCGGTCGAGACGATGCTGAGCAAAGCGATTTTCGGAG 1120
BSNT_01150___ 1121 CTATTTTTGCGATTGTGATTATTCTCTTATTCTTAAGAGATATCAAATCA 1170
|.||.||||||.|||||||.||||||||||||.||||.|||||.||||||
BL02631___swr 1121 CGATCTTTGCGGTTGTGATCATTCTCTTATTCCTAAGGGATATTAAATCA 1170
BSNT_01150___ 1171 ACATTAATTTCTGTTGTTTCAATTCCATTATCATTGCTGATCGCACTCCT 1220
||||||||.||.||..||||.||||||||.||||||.|.||||||||.||
BL02631___swr 1171 ACATTAATCTCGGTCATTTCGATTCCATTGTCATTGTTAATCGCACTGCT 1220
BSNT_01150___ 1221 TGTGCTGCAGCAGCTTGATATCACATTGAATATTATGACGCTCGGCGCAA 1270
.||.|||.|.||||||||||||||..|||||||.||||||||||||||.|
BL02631___swr 1221 CGTCCTGAACCAGCTTGATATCACGCTGAATATCATGACGCTCGGCGCCA 1270
BSNT_01150___ 1271 TGACCGTTGCCATCGGACGTGTAGTCGATGACTCCATCGTTGTCATCGAG 1320
||||.||.|||||||||||.||.|||||.|||||.|||||.||||||||.
BL02631___swr 1271 TGACAGTCGCCATCGGACGGGTTGTCGACGACTCGATCGTCGTCATCGAA 1320
BSNT_01150___ 1321 AACATTTACCGCCGCATGAGACTCAAAGATGAGCCGCTCCGCGGAAAAGC 1370
||||||||||||||||||||.||.||||||||||||||.|||||||||||
BL02631___swr 1321 AACATTTACCGCCGCATGAGGCTGAAAGATGAGCCGCTGCGCGGAAAAGC 1370
BSNT_01150___ 1371 ATTGGTTCGTGAAGCGACGAAGGAAATGTTTAAACCGATCATGTCATCGA 1420
..|.||.||.||||||||||||||||||||.|..||||||||||||||.|
BL02631___swr 1371 GCTCGTGCGCGAAGCGACGAAGGAAATGTTCATGCCGATCATGTCATCAA 1420
BSNT_01150___ 1421 CGATCGTGACAATCGCGGTATTCCTGCCGCTCGCACTTGTAGGCGGACAA 1470
||||||||||||||||||||||||||||||||||||||||.|||||.|||
BL02631___swr 1421 CGATCGTGACAATCGCGGTATTCCTGCCGCTCGCACTTGTCGGCGGTCAA 1470
BSNT_01150___ 1471 ATCGGTGAATTGTTTATTCCATTTGCCTTAACGATTGTTTTTGCGCTTGC 1520
|||||.||||||||.||.||.|||||.|||||||||||.||.|||||.||
BL02631___swr 1471 ATCGGCGAATTGTTCATGCCGTTTGCTTTAACGATTGTATTCGCGCTCGC 1520
BSNT_01150___ 1521 CGCATCACTGGTGATTTCAATCACGCTTGTGCCGATGCTCGCACACAGCC 1570
.|||||.||..||||..|.||||||||.|||||||||||.||.||||.||
BL02631___swr 1521 TGCATCCCTCTTGATCGCGATCACGCTCGTGCCGATGCTTGCGCACACCC 1570
BSNT_01150___ 1571 TGTTCAAAAAATCATTAACCGGTGCGCCGATTAAAGCGAAAGAACACAAA 1620
|.||||||||||||||.||.||.||||||.|.||.||||||||||||||.
BL02631___swr 1571 TCTTCAAAAAATCATTGACAGGCGCGCCGGTAAAGGCGAAAGAACACAAG 1620
BSNT_01150___ 1621 CCAGGCAGACTTGCAAACATCTATAAAAAAGTATTGAACTGGGCGCTGAG 1670
||.||...|||.||.|||.||||.||||||||.|||||.|||.||||.||
BL02631___swr 1621 CCTGGGGTACTGGCCAACTTCTACAAAAAAGTGTTGAATTGGTCGCTCAG 1670
BSNT_01150___ 1671 CCACAAATGGATCACGTCTATCATCGCTGTTCTGATGCTCCTTGGAAGCT 1720
|||.|||||||||||.||.||||||||.|||||||||||..|.|||||||
BL02631___swr 1671 CCATAAATGGATCACATCGATCATCGCGGTTCTGATGCTGGTCGGAAGCT 1720
BSNT_01150___ 1721 TGTTCCTCGTACCGTTAATCGGTGCCAGCTACCTGCCGTCCGAGGAAGAA 1770
||||||||||.|||.|.|||||.||.||||||.||||..||....|||||
BL02631___swr 1721 TGTTCCTCGTGCCGCTGATCGGAGCGAGCTACTTGCCTGCCACAAAAGAA 1770
BSNT_01150___ 1771 AAAACGATGCAGCTCACATACAGCCCAGAACCGGGTGAAACGAAAAAAGA 1820
||||.|.|||||.||||.||||.|||.||||||||.||||||||||||||
BL02631___swr 1771 AAAATGGTGCAGATCACGTACACCCCTGAACCGGGAGAAACGAAAAAAGA 1820
BSNT_01150___ 1821 AGCCGAAAATGAAGCTGAAAAAGCGGAAAAAATCCTGCTTGACCGCAAGC 1870
|||.|||||.|||||..|||||||.|||.|||||||..|.||||||||.|
BL02631___swr 1821 AGCGGAAAAGGAAGCGCAAAAAGCTGAAGAAATCCTATTGGACCGCAAAC 1870
BSNT_01150___ 1871 ATGTCGATACGGTTCAGTATTCATTAGGCTCTGGCAGCCCGCTTGCGGGA 1920
|.||||||||||||||||||.|.|||||..|.||.|..|||||...|||.
BL02631___swr 1871 ACGTCGATACGGTTCAGTATACGTTAGGAGCGGGAAATCCGCTGATGGGC 1920
BSNT_01150___ 1921 GGAGATTCTAACGGCGCGTTATTCTATATCAAATATGA--AAGCGACACA 1968
|||..|||.|||||||||||.||||||||||||||||| || |||||.
BL02631___swr 1921 GGAAGTTCAAACGGCGCGTTGTTCTATATCAAATATGAGGAA--GACACG 1968
BSNT_01150___ 1969 CCTGACTTTGATAAAGAAAAAGATAACGTTCTGAAGGAAATCCAAAAGCA 2018
|||||.||||||.|||||||.||.|.|||..|.||.||.||.||.|||||
BL02631___swr 1969 CCTGATTTTGATCAAGAAAAGGACAGCGTCTTAAAAGACATTCAGAAGCA 2018
BSNT_01150___ 2019 ATCTGACCGCGGAGAATGGAAGTCACAGGACTTCAGCTCTTCAGGCAATA 2068
|||..|.||||||||||||||..|.|||||.||||||||.||||||||.|
BL02631___swr 2019 ATCCAAACGCGGAGAATGGAAAACTCAGGATTTCAGCTCCTCAGGCAACA 2068
BSNT_01150___ 2069 ACAACGAATTAACATACTATGTGTATGGCGATTCTGAAAACGATATTAAA 2118
||||.||.|||||.||.||||||||.||.|||||||||||.||.||||||
BL02631___swr 2069 ACAATGAGTTAACGTATTATGTGTACGGGGATTCTGAAAAAGAGATTAAA 2118
BSNT_01150___ 2119 GACACGGTCAAAGATATTGAAAAAATCATGAAGGATGAAAAGGATCTGAA 2168
|.|||.||.|||||.||.|||||.||.|||||.||..||||.||.|||||
BL02631___swr 2119 GGCACTGTAAAAGAGATCGAAAAGATAATGAAAGACCAAAAAGACCTGAA 2168
BSNT_01150___ 2169 AAACGTAAACTCAGGCCTTTCCAGCACATATGATGAGTACACATTTGTCG 2218
||||||||.|||||||||.||||||||||||||.||.||.||||||||||
BL02631___swr 2169 AAACGTAAGCTCAGGCCTGTCCAGCACATATGACGAATATACATTTGTCG 2218
BSNT_01150___ 2219 CTGACCAAGAAAAACTAAGCAAACTCGGTTTAACTGCGTCTCAAATTTCT 2268
|||||||.||.|||.|||||||||||||.|||||.||.||.||.||||||
BL02631___swr 2219 CTGACCAGGAGAAATTAAGCAAACTCGGGTTAACGGCATCACAGATTTCT 2268
BSNT_01150___ 2269 CAGGCCTTAATGTCACAAACATCACAAGAACCGCTCACAACTGTGAAAAA 2318
|||||..|.|||..|.|||||||.||.|..|||||.|||||.||||||||
BL02631___swr 2269 CAGGCGCTCATGAAAGAAACATCGCAGGCGCCGCTTACAACCGTGAAAAA 2318
BSNT_01150___ 2319 AGACGGCAAAGAGCTTGATGTGAACATTAAGACAGAAAAAGACGAGTATA 2368
||||||.|||||.||||||||.|..|||||.||||||.||||....||||
BL02631___swr 2319 AGACGGGAAAGATCTTGATGTTACGATTAAAACAGAAGAAGAAACATATA 2368
BSNT_01150___ 2369 AGAGTGTGAAAGATTTAGAGAATAAAAAGATCACTTCCGCGACTGGCCAG 2418
|.||.||.|||||||||||..|.|||||.|||||..|..||||.||||||
BL02631___swr 2369 AAAGCGTCAAAGATTTAGAAGACAAAAAAATCACAACTCCGACCGGCCAG 2418
BSNT_01150___ 2419 GAAGTCAAAATCGGCGATGTGGCAAAAGTGAAGGAAGGATCAACATCAGA 2468
|||||.||||||||||||||.||.||||||||||||||..|.|||||.||
BL02631___swr 2419 GAAGTGAAAATCGGCGATGTCGCGAAAGTGAAGGAAGGCACGACATCCGA 2468
BSNT_01150___ 2469 TACCGTGTCAAAACGTGATGGAAAAGTCTATGCGGATGTCACAGGTGAGG 2518
.||..|.||.|||||.||.||.|||.|||||||.||||||||.|..||.|
BL02631___swr 2469 CACAATTTCGAAACGGGACGGCAAAATCTATGCCGATGTCACGGCGGAAG 2518
BSNT_01150___ 2519 TTACGTCTGACAACGTCACAGCCGTATCAGCTGCTATCCAGAAGAAAATC 2568
|.||.||.|||||||||||.||||||||||..|...|.|||||.||.|||
BL02631___swr 2519 TCACATCAGACAACGTCACGGCCGTATCAGTCGACGTACAGAAAAACATC 2568
BSNT_01150___ 2569 GATAAGCTAGACCATCCTGATAACGT----ATCGATTGACACAGGCGGCG 2614
||.|||.|.||||..|||||.||||| |||||| ||.|||||||
BL02631___swr 2569 GACAAGATCGACCTGCCTGACAACGTCACAATCGAT----ACCGGCGGCG 2614
BSNT_01150___ 2615 TATCAGCGGATATCGCTGATTCCTTCACGAAGCTCGGTTTAGCGATGCTG 2664
||||.||.|||||||..||||||||.||.||.|||||..|.||.|||||.
BL02631___swr 2615 TATCCGCTGATATCGAAGATTCCTTTACAAAACTCGGACTCGCAATGCTT 2664
BSNT_01150___ 2665 GCAGCAATAGCGATCGTTTACCTTGTGCTCGTGATTACCTTCGGCGGAGC 2714
||.||..|.||||||||.|||||.|||||.||||||||.|||||||||||
BL02631___swr 2665 GCGGCGGTTGCGATCGTCTACCTCGTGCTTGTGATTACATTCGGCGGAGC 2714
BSNT_01150___ 2715 ACTAGCGCCATTTGCTATTCTGTTCTCATTGCCGTTCACAGTCATCGGTG 2764
|||.|||||||||||.||.||||||||..|||||||.||.||||||||.|
BL02631___swr 2715 ACTGGCGCCATTTGCGATCCTGTTCTCGCTGCCGTTTACCGTCATCGGCG 2764
BSNT_01150___ 2765 CCCTGGTCGGACTTTACGTATCAGGTGAAACGATCAGTCTGAACGCAATG 2814
||.||||.|||||||||||||||||.|||||.|||||..|||||||||||
BL02631___swr 2765 CCTTGGTGGGACTTTACGTATCAGGAGAAACAATCAGCTTGAACGCAATG 2814
BSNT_01150___ 2815 ATCGGTATGCTCATGCTGATCGGTATCGTTGTCACGAATGCGATTGTCTT 2864
|||||.|||||.|||||||||||||||||.|||||.||.|||||||||.|
BL02631___swr 2815 ATCGGAATGCTGATGCTGATCGGTATCGTCGTCACAAACGCGATTGTCCT 2864
BSNT_01150___ 2865 AATTGACCGCGTGATTCATAAGGAAGCGGAAGGCCTGTCGACGAGAGAAG 2914
|||.||||||||.||.|||||||||||||||||.||.||.||||||||||
BL02631___swr 2865 AATCGACCGCGTCATCCATAAGGAAGCGGAAGGGCTCTCAACGAGAGAAG 2914
BSNT_01150___ 2915 CGCTCCTGGAAGCCGGCTCTACACGACTCCGTCCGATCCTGATGACAGCC 2964
|.|||||||||||||||||||||.|.||||||||||||||||||||.|||
BL02631___swr 2915 CACTCCTGGAAGCCGGCTCTACAAGGCTCCGTCCGATCCTGATGACGGCC 2964
BSNT_01150___ 2965 ATTGCGACAATCGGCGCCTTGATTCCATTAGCCCTCGGCTTCGAAGGCGG 3014
||.||.||||||||||||.||||||||||.||.|||||.||.||||||||
BL02631___swr 2965 ATCGCCACAATCGGCGCCCTGATTCCATTGGCGCTCGGATTTGAAGGCGG 3014
BSNT_01150___ 3015 AAGCCAGGTCATTTCAAAAGGACTCGGCGTCACGGTTATCGGCGGCTTGA 3064
.||||||||||||||||||||.|||||||||||.|||||||||||..|||
BL02631___swr 3015 CAGCCAGGTCATTTCAAAAGGGCTCGGCGTCACCGTTATCGGCGGTCTGA 3064
BSNT_01150___ 3065 TCAGTTCAACGCTTCTGACGCTCTTGATCGTGCCAATCGTATATGAAGTA 3114
|||||||||||||.||.||.||..|||||||.||.||||||||.||||||
BL02631___swr 3065 TCAGTTCAACGCTCCTCACCCTTCTGATCGTACCGATCGTATACGAAGTA 3114
BSNT_01150___ 3115 TTGGCGAAGTTCCGCAAGAAAAAACCGGGAACGGAAGAAGAGTAA 3159
.|||||||.||||||..||||||||||||.|.|||||||||||||
BL02631___swr 3115 CTGGCGAAATTCCGCCGGAAAAAACCGGGTATGGAAGAAGAGTAA 3159
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