Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01150 and BL02631

See Amino acid alignment / Visit BSNT_01150 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:41
# Commandline: needle
#    -asequence dna-align/BSNT_01150___yerP.1.5803.seq
#    -bsequence dna-align/BL02631___swrC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01150___yerP-BL02631___swrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01150___yerP-BL02631___swrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01150___yerP
# 2: BL02631___swrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 3195
# Identity:    2605/3195 (81.5%)
# Similarity:  2605/3195 (81.5%)
# Gaps:          72/3195 ( 2.3%)
# Score: 10717.5
# 
#
#=======================================

BSNT_01150___      1 ATGAATCACGTTATTAATTTCGTTCTGAAAAACAAATTCGCCGTATGGCT     50
                     ||||||....|.||||||||.||.||.||.|||||.|||||.||.|||||
BL02631___swr      1 ATGAATTCTATCATTAATTTTGTACTAAAGAACAAGTTCGCTGTGTGGCT     50

BSNT_01150___     51 GATGACGATTATTGTAACGGCAGCCGGCTTGTATGCGGGTATGAATATGA    100
                     |||||||||||||||.||||..||||||.|.|||||||||.|.|||||||
BL02631___swr     51 GATGACGATTATTGTTACGGTTGCCGGCATTTATGCGGGTTTAAATATGA    100

BSNT_01150___    101 AGCAAGAGTCTATTCCTGACGTGAACATGCCTTACTTGACGATCAGCACG    150
                     ||||.||.||.||||||||.||||||||||||||.|||||.|||||||||
BL02631___swr    101 AGCAGGAATCGATTCCTGATGTGAACATGCCTTATTTGACCATCAGCACG    150

BSNT_01150___    151 ACATATCCGGGTGCGACACCAAGCCAAGTGGCTGATGAAGTGACCAAACC    200
                     ||||||||.||.||.||.||.|||||.||.|||||||||||.||.||.||
BL02631___swr    151 ACATATCCCGGAGCCACTCCGAGCCAGGTAGCTGATGAAGTCACAAAGCC    200

BSNT_01150___    201 GGTTGAACAAGCCGTGCAGAACTTGGACGGTGTCAGTGTTGTGACGTCGA    250
                     ||||||||||||||||||.||..|||||||.|||||.|||||||||||.|
BL02631___swr    201 GGTTGAACAAGCCGTGCAAAATCTGGACGGCGTCAGCGTTGTGACGTCCA    250

BSNT_01150___    251 CGTCCTATGAAAACGCATCGTCGGTCATGATTGAATATGATTATGAGAAA    300
                     |.||.||||||||||||||.|||||.|||||||||||.||||||||.||.
BL02631___swr    251 CATCGTATGAAAACGCATCATCGGTGATGATTGAATACGATTATGAAAAG    300

BSNT_01150___    301 GATATGGACAAAGCGAAAACAGAAGCAGCTGAAGCGTTAGAAAACGTCAA    350
                     |||||||||||||||||.||.|||||.||||||||.||.|..||..||.|
BL02631___swr    301 GATATGGACAAAGCGAAGACGGAAGCCGCTGAAGCATTGGCGAATCTCGA    350

BSNT_01150___    351 CCTGCCTGATGACGCGAAGGATCCGGAG-ATTTCACGCTACAGCTTGAAT    399
                     .|||||.||..|.|||||.||.|| ||| |||||.|||||||||.|||||
BL02631___swr    351 TCTGCCGGACAATGCGAAAGAGCC-GAGCATTTCGCGCTACAGCATGAAT    399

BSNT_01150___    400 TCATTCCCGATTCTGACGCTGAGCGTGTCCAGTGATAAAGATAATCTACA    449
                     ||.|||||||||||..||||.||||||||||||||||||||..||||.||
BL02631___swr    400 TCCTTCCCGATTCTCGCGCTCAGCGTGTCCAGTGATAAAGACGATCTTCA    449

BSNT_01150___    450 AGAGC-TGACGAAACAAGTGGAGGACAGCCTCGTTTCTAAACTTGAAGGC    498
                     | ||| ||||||||.|||||||.|||||||||.|..|.||.|||||||||
BL02631___swr    450 A-AGCTTGACGAAAAAAGTGGAAGACAGCCTCCTGACGAAGCTTGAAGGC    498

BSNT_01150___    499 ATAGAAGGCGTTGCGTCCGTCCAAGTATCAGGCCAGCAGGTGGAAGAGGT    548
                     .|.||||||||.||.|||||.||..|.||.||.||||||||.|||||.||
BL02631___swr    499 CTTGAAGGCGTAGCTTCCGTTCAGCTTTCCGGTCAGCAGGTTGAAGAAGT    548

BSNT_01150___    549 TGAATTCTCTTTCAAAGAAGACAAACTGAAGGAATACGGCCTTGATGAAG    598
                     .|||||.||.||.|||.||||||||.|||||.|||||||.|||||.||.|
BL02631___swr    549 CGAATTTTCATTTAAAAAAGACAAATTGAAGCAATACGGGCTTGACGAGG    598

BSNT_01150___    599 ATACAGTCAAGCAAGTGATTCAAGGTTCAGATGTGACAACTCCGCTTGGA    648
                     |||||||||||||||||||||||||.||.||||||||.|||||||||||.
BL02631___swr    599 ATACAGTCAAGCAAGTGATTCAAGGATCTGATGTGACGACTCCGCTTGGG    648

BSNT_01150___    649 TTGTACACATTCGGAAATGAAGAAAAATCTGTCGTCGTCAGCGGCGATAT    698
                     ||||||||||||||.||.|||||||||||.||||||||||||||||||||
BL02631___swr    649 TTGTACACATTCGGCAAAGAAGAAAAATCGGTCGTCGTCAGCGGCGATAT    698

BSNT_01150___    699 TGAAACAATTAAAGATTTGAAGAATATGAGAATCCCGACGGCATCTGCTT    748
                     .||.|||||||||||.|||||.|||||||||||.||..||||.|||||  
BL02631___swr    699 CGACACAATTAAAGACTTGAAAAATATGAGAATTCCAGCGGCGTCTGC--    746

BSNT_01150___    749 CAAGTGCAGGCAGC-AGCGCAGCATCTCAAGCGGGTGCGCAGAGTGCTCA    797
                         .|.|||| || ||||      |.|||||.||.|||||.|||||.||
BL02631___swr    747 ----CGGAGGC-GCAAGCG------CGCAAGCCGGAGCGCAAAGTGCGCA    785

BSNT_01150___    798 AGCAGCCCA--------------AAGC----GCACA-AGCGGCAGCACAG    828
                     .||.|||||              ||||    ||||| ||| ||.|.|||.
BL02631___swr    786 GGCGGCCCAGGGGGCGCAGGCTCAAGCCGGGGCACAGAGC-GCCGGACAA    834

BSNT_01150___    829 GCGCAGCAAAGCGCAAGCACAGCAGTGCCGACGGTCAAGCTTTCTGACAT    878
                     ||.||||||||||      |.|.|||.||||||||.|||||.||||||||
BL02631___swr    835 GCTCAGCAAAGCG------CGGGAGTCCCGACGGTTAAGCTGTCTGACAT    878

BSNT_01150___    879 TGCCACAATTAAAGATGTGAAAAAAGCTGAATCTGTTTCACGCACAAATG    928
                     .||.||.|||||||||||.||||||||.|||||..|||||||.||.||||
BL02631___swr    879 CGCAACGATTAAAGATGTCAAAAAAGCCGAATCCATTTCACGAACCAATG    928

BSNT_01150___    929 GCAAAGACAGCATCGGCATCAATATCGTCAAAGCAAACGATGCGAATACG    978
                     |||||||||||||||||||||...||.|.|||||||||||.||.|||||.
BL02631___swr    929 GCAAAGACAGCATCGGCATCAGCGTCATTAAAGCAAACGACGCCAATACC    978

BSNT_01150___    979 GTAGAGGTTGCCGACAATGTCAAAGCTGAGCT-GAAGAAGTTCAAAGAAG   1027
                     ||.|||||.||||||||.||.||||||||.|| |||.|| ||||||.|||
BL02631___swr    979 GTCGAGGTAGCCGACAACGTAAAAGCTGAACTCGAACAA-TTCAAAAAAG   1027

BSNT_01150___   1028 ACCATAAAGGCTTCAATTACAGCGCAACTCTCGACAT-------GGCGGA   1070
                     ||||.|||||||||||.|||||       ||||||||       |||.||
BL02631___swr   1028 ACCACAAAGGCTTCAAATACAG-------CTCGACATACGATCAGGCCGA   1070

BSNT_01150___   1071 GCCGATCACACAGTCAGTTGACACGATGTTAAGCAAAGCCATCTTCGGTG   1120
                     .||||||||..||||.||.||.||||||.|.||||||||.||.|||||.|
BL02631___swr   1071 ACCGATCACCGAGTCGGTCGAGACGATGCTGAGCAAAGCGATTTTCGGAG   1120

BSNT_01150___   1121 CTATTTTTGCGATTGTGATTATTCTCTTATTCTTAAGAGATATCAAATCA   1170
                     |.||.||||||.|||||||.||||||||||||.||||.|||||.||||||
BL02631___swr   1121 CGATCTTTGCGGTTGTGATCATTCTCTTATTCCTAAGGGATATTAAATCA   1170

BSNT_01150___   1171 ACATTAATTTCTGTTGTTTCAATTCCATTATCATTGCTGATCGCACTCCT   1220
                     ||||||||.||.||..||||.||||||||.||||||.|.||||||||.||
BL02631___swr   1171 ACATTAATCTCGGTCATTTCGATTCCATTGTCATTGTTAATCGCACTGCT   1220

BSNT_01150___   1221 TGTGCTGCAGCAGCTTGATATCACATTGAATATTATGACGCTCGGCGCAA   1270
                     .||.|||.|.||||||||||||||..|||||||.||||||||||||||.|
BL02631___swr   1221 CGTCCTGAACCAGCTTGATATCACGCTGAATATCATGACGCTCGGCGCCA   1270

BSNT_01150___   1271 TGACCGTTGCCATCGGACGTGTAGTCGATGACTCCATCGTTGTCATCGAG   1320
                     ||||.||.|||||||||||.||.|||||.|||||.|||||.||||||||.
BL02631___swr   1271 TGACAGTCGCCATCGGACGGGTTGTCGACGACTCGATCGTCGTCATCGAA   1320

BSNT_01150___   1321 AACATTTACCGCCGCATGAGACTCAAAGATGAGCCGCTCCGCGGAAAAGC   1370
                     ||||||||||||||||||||.||.||||||||||||||.|||||||||||
BL02631___swr   1321 AACATTTACCGCCGCATGAGGCTGAAAGATGAGCCGCTGCGCGGAAAAGC   1370

BSNT_01150___   1371 ATTGGTTCGTGAAGCGACGAAGGAAATGTTTAAACCGATCATGTCATCGA   1420
                     ..|.||.||.||||||||||||||||||||.|..||||||||||||||.|
BL02631___swr   1371 GCTCGTGCGCGAAGCGACGAAGGAAATGTTCATGCCGATCATGTCATCAA   1420

BSNT_01150___   1421 CGATCGTGACAATCGCGGTATTCCTGCCGCTCGCACTTGTAGGCGGACAA   1470
                     ||||||||||||||||||||||||||||||||||||||||.|||||.|||
BL02631___swr   1421 CGATCGTGACAATCGCGGTATTCCTGCCGCTCGCACTTGTCGGCGGTCAA   1470

BSNT_01150___   1471 ATCGGTGAATTGTTTATTCCATTTGCCTTAACGATTGTTTTTGCGCTTGC   1520
                     |||||.||||||||.||.||.|||||.|||||||||||.||.|||||.||
BL02631___swr   1471 ATCGGCGAATTGTTCATGCCGTTTGCTTTAACGATTGTATTCGCGCTCGC   1520

BSNT_01150___   1521 CGCATCACTGGTGATTTCAATCACGCTTGTGCCGATGCTCGCACACAGCC   1570
                     .|||||.||..||||..|.||||||||.|||||||||||.||.||||.||
BL02631___swr   1521 TGCATCCCTCTTGATCGCGATCACGCTCGTGCCGATGCTTGCGCACACCC   1570

BSNT_01150___   1571 TGTTCAAAAAATCATTAACCGGTGCGCCGATTAAAGCGAAAGAACACAAA   1620
                     |.||||||||||||||.||.||.||||||.|.||.||||||||||||||.
BL02631___swr   1571 TCTTCAAAAAATCATTGACAGGCGCGCCGGTAAAGGCGAAAGAACACAAG   1620

BSNT_01150___   1621 CCAGGCAGACTTGCAAACATCTATAAAAAAGTATTGAACTGGGCGCTGAG   1670
                     ||.||...|||.||.|||.||||.||||||||.|||||.|||.||||.||
BL02631___swr   1621 CCTGGGGTACTGGCCAACTTCTACAAAAAAGTGTTGAATTGGTCGCTCAG   1670

BSNT_01150___   1671 CCACAAATGGATCACGTCTATCATCGCTGTTCTGATGCTCCTTGGAAGCT   1720
                     |||.|||||||||||.||.||||||||.|||||||||||..|.|||||||
BL02631___swr   1671 CCATAAATGGATCACATCGATCATCGCGGTTCTGATGCTGGTCGGAAGCT   1720

BSNT_01150___   1721 TGTTCCTCGTACCGTTAATCGGTGCCAGCTACCTGCCGTCCGAGGAAGAA   1770
                     ||||||||||.|||.|.|||||.||.||||||.||||..||....|||||
BL02631___swr   1721 TGTTCCTCGTGCCGCTGATCGGAGCGAGCTACTTGCCTGCCACAAAAGAA   1770

BSNT_01150___   1771 AAAACGATGCAGCTCACATACAGCCCAGAACCGGGTGAAACGAAAAAAGA   1820
                     ||||.|.|||||.||||.||||.|||.||||||||.||||||||||||||
BL02631___swr   1771 AAAATGGTGCAGATCACGTACACCCCTGAACCGGGAGAAACGAAAAAAGA   1820

BSNT_01150___   1821 AGCCGAAAATGAAGCTGAAAAAGCGGAAAAAATCCTGCTTGACCGCAAGC   1870
                     |||.|||||.|||||..|||||||.|||.|||||||..|.||||||||.|
BL02631___swr   1821 AGCGGAAAAGGAAGCGCAAAAAGCTGAAGAAATCCTATTGGACCGCAAAC   1870

BSNT_01150___   1871 ATGTCGATACGGTTCAGTATTCATTAGGCTCTGGCAGCCCGCTTGCGGGA   1920
                     |.||||||||||||||||||.|.|||||..|.||.|..|||||...|||.
BL02631___swr   1871 ACGTCGATACGGTTCAGTATACGTTAGGAGCGGGAAATCCGCTGATGGGC   1920

BSNT_01150___   1921 GGAGATTCTAACGGCGCGTTATTCTATATCAAATATGA--AAGCGACACA   1968
                     |||..|||.|||||||||||.|||||||||||||||||  ||  |||||.
BL02631___swr   1921 GGAAGTTCAAACGGCGCGTTGTTCTATATCAAATATGAGGAA--GACACG   1968

BSNT_01150___   1969 CCTGACTTTGATAAAGAAAAAGATAACGTTCTGAAGGAAATCCAAAAGCA   2018
                     |||||.||||||.|||||||.||.|.|||..|.||.||.||.||.|||||
BL02631___swr   1969 CCTGATTTTGATCAAGAAAAGGACAGCGTCTTAAAAGACATTCAGAAGCA   2018

BSNT_01150___   2019 ATCTGACCGCGGAGAATGGAAGTCACAGGACTTCAGCTCTTCAGGCAATA   2068
                     |||..|.||||||||||||||..|.|||||.||||||||.||||||||.|
BL02631___swr   2019 ATCCAAACGCGGAGAATGGAAAACTCAGGATTTCAGCTCCTCAGGCAACA   2068

BSNT_01150___   2069 ACAACGAATTAACATACTATGTGTATGGCGATTCTGAAAACGATATTAAA   2118
                     ||||.||.|||||.||.||||||||.||.|||||||||||.||.||||||
BL02631___swr   2069 ACAATGAGTTAACGTATTATGTGTACGGGGATTCTGAAAAAGAGATTAAA   2118

BSNT_01150___   2119 GACACGGTCAAAGATATTGAAAAAATCATGAAGGATGAAAAGGATCTGAA   2168
                     |.|||.||.|||||.||.|||||.||.|||||.||..||||.||.|||||
BL02631___swr   2119 GGCACTGTAAAAGAGATCGAAAAGATAATGAAAGACCAAAAAGACCTGAA   2168

BSNT_01150___   2169 AAACGTAAACTCAGGCCTTTCCAGCACATATGATGAGTACACATTTGTCG   2218
                     ||||||||.|||||||||.||||||||||||||.||.||.||||||||||
BL02631___swr   2169 AAACGTAAGCTCAGGCCTGTCCAGCACATATGACGAATATACATTTGTCG   2218

BSNT_01150___   2219 CTGACCAAGAAAAACTAAGCAAACTCGGTTTAACTGCGTCTCAAATTTCT   2268
                     |||||||.||.|||.|||||||||||||.|||||.||.||.||.||||||
BL02631___swr   2219 CTGACCAGGAGAAATTAAGCAAACTCGGGTTAACGGCATCACAGATTTCT   2268

BSNT_01150___   2269 CAGGCCTTAATGTCACAAACATCACAAGAACCGCTCACAACTGTGAAAAA   2318
                     |||||..|.|||..|.|||||||.||.|..|||||.|||||.||||||||
BL02631___swr   2269 CAGGCGCTCATGAAAGAAACATCGCAGGCGCCGCTTACAACCGTGAAAAA   2318

BSNT_01150___   2319 AGACGGCAAAGAGCTTGATGTGAACATTAAGACAGAAAAAGACGAGTATA   2368
                     ||||||.|||||.||||||||.|..|||||.||||||.||||....||||
BL02631___swr   2319 AGACGGGAAAGATCTTGATGTTACGATTAAAACAGAAGAAGAAACATATA   2368

BSNT_01150___   2369 AGAGTGTGAAAGATTTAGAGAATAAAAAGATCACTTCCGCGACTGGCCAG   2418
                     |.||.||.|||||||||||..|.|||||.|||||..|..||||.||||||
BL02631___swr   2369 AAAGCGTCAAAGATTTAGAAGACAAAAAAATCACAACTCCGACCGGCCAG   2418

BSNT_01150___   2419 GAAGTCAAAATCGGCGATGTGGCAAAAGTGAAGGAAGGATCAACATCAGA   2468
                     |||||.||||||||||||||.||.||||||||||||||..|.|||||.||
BL02631___swr   2419 GAAGTGAAAATCGGCGATGTCGCGAAAGTGAAGGAAGGCACGACATCCGA   2468

BSNT_01150___   2469 TACCGTGTCAAAACGTGATGGAAAAGTCTATGCGGATGTCACAGGTGAGG   2518
                     .||..|.||.|||||.||.||.|||.|||||||.||||||||.|..||.|
BL02631___swr   2469 CACAATTTCGAAACGGGACGGCAAAATCTATGCCGATGTCACGGCGGAAG   2518

BSNT_01150___   2519 TTACGTCTGACAACGTCACAGCCGTATCAGCTGCTATCCAGAAGAAAATC   2568
                     |.||.||.|||||||||||.||||||||||..|...|.|||||.||.|||
BL02631___swr   2519 TCACATCAGACAACGTCACGGCCGTATCAGTCGACGTACAGAAAAACATC   2568

BSNT_01150___   2569 GATAAGCTAGACCATCCTGATAACGT----ATCGATTGACACAGGCGGCG   2614
                     ||.|||.|.||||..|||||.|||||    ||||||    ||.|||||||
BL02631___swr   2569 GACAAGATCGACCTGCCTGACAACGTCACAATCGAT----ACCGGCGGCG   2614

BSNT_01150___   2615 TATCAGCGGATATCGCTGATTCCTTCACGAAGCTCGGTTTAGCGATGCTG   2664
                     ||||.||.|||||||..||||||||.||.||.|||||..|.||.|||||.
BL02631___swr   2615 TATCCGCTGATATCGAAGATTCCTTTACAAAACTCGGACTCGCAATGCTT   2664

BSNT_01150___   2665 GCAGCAATAGCGATCGTTTACCTTGTGCTCGTGATTACCTTCGGCGGAGC   2714
                     ||.||..|.||||||||.|||||.|||||.||||||||.|||||||||||
BL02631___swr   2665 GCGGCGGTTGCGATCGTCTACCTCGTGCTTGTGATTACATTCGGCGGAGC   2714

BSNT_01150___   2715 ACTAGCGCCATTTGCTATTCTGTTCTCATTGCCGTTCACAGTCATCGGTG   2764
                     |||.|||||||||||.||.||||||||..|||||||.||.||||||||.|
BL02631___swr   2715 ACTGGCGCCATTTGCGATCCTGTTCTCGCTGCCGTTTACCGTCATCGGCG   2764

BSNT_01150___   2765 CCCTGGTCGGACTTTACGTATCAGGTGAAACGATCAGTCTGAACGCAATG   2814
                     ||.||||.|||||||||||||||||.|||||.|||||..|||||||||||
BL02631___swr   2765 CCTTGGTGGGACTTTACGTATCAGGAGAAACAATCAGCTTGAACGCAATG   2814

BSNT_01150___   2815 ATCGGTATGCTCATGCTGATCGGTATCGTTGTCACGAATGCGATTGTCTT   2864
                     |||||.|||||.|||||||||||||||||.|||||.||.|||||||||.|
BL02631___swr   2815 ATCGGAATGCTGATGCTGATCGGTATCGTCGTCACAAACGCGATTGTCCT   2864

BSNT_01150___   2865 AATTGACCGCGTGATTCATAAGGAAGCGGAAGGCCTGTCGACGAGAGAAG   2914
                     |||.||||||||.||.|||||||||||||||||.||.||.||||||||||
BL02631___swr   2865 AATCGACCGCGTCATCCATAAGGAAGCGGAAGGGCTCTCAACGAGAGAAG   2914

BSNT_01150___   2915 CGCTCCTGGAAGCCGGCTCTACACGACTCCGTCCGATCCTGATGACAGCC   2964
                     |.|||||||||||||||||||||.|.||||||||||||||||||||.|||
BL02631___swr   2915 CACTCCTGGAAGCCGGCTCTACAAGGCTCCGTCCGATCCTGATGACGGCC   2964

BSNT_01150___   2965 ATTGCGACAATCGGCGCCTTGATTCCATTAGCCCTCGGCTTCGAAGGCGG   3014
                     ||.||.||||||||||||.||||||||||.||.|||||.||.||||||||
BL02631___swr   2965 ATCGCCACAATCGGCGCCCTGATTCCATTGGCGCTCGGATTTGAAGGCGG   3014

BSNT_01150___   3015 AAGCCAGGTCATTTCAAAAGGACTCGGCGTCACGGTTATCGGCGGCTTGA   3064
                     .||||||||||||||||||||.|||||||||||.|||||||||||..|||
BL02631___swr   3015 CAGCCAGGTCATTTCAAAAGGGCTCGGCGTCACCGTTATCGGCGGTCTGA   3064

BSNT_01150___   3065 TCAGTTCAACGCTTCTGACGCTCTTGATCGTGCCAATCGTATATGAAGTA   3114
                     |||||||||||||.||.||.||..|||||||.||.||||||||.||||||
BL02631___swr   3065 TCAGTTCAACGCTCCTCACCCTTCTGATCGTACCGATCGTATACGAAGTA   3114

BSNT_01150___   3115 TTGGCGAAGTTCCGCAAGAAAAAACCGGGAACGGAAGAAGAGTAA   3159
                     .|||||||.||||||..||||||||||||.|.|||||||||||||
BL02631___swr   3115 CTGGCGAAATTCCGCCGGAAAAAACCGGGTATGGAAGAAGAGTAA   3159


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