Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01152 and BL02629
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence dna-align/BSNT_01152.1.5803.seq
# -bsequence dna-align/BL02629___yefA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01152-BL02629___yefA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01152-BL02629___yefA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01152
# 2: BL02629___yefA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1400
# Identity: 843/1400 (60.2%)
# Similarity: 843/1400 (60.2%)
# Gaps: 394/1400 (28.1%)
# Score: 3466.0
#
#
#=======================================
BSNT_01152 1 ATGAAAATGAAACCCCCAGTAGAAAAAAACGAA---TACTATGACGTGAC 47
||||||...|||.||||.||..|||||||.||| |||.|||.|||
BL02629___yef 1 ATGAAACAAAAAGCCCCCGTTCAAAAAAATGAATATTACAATGTCGT--- 47
BSNT_01152 48 ATTTGAGGATTTGACCCACGAAGGAGCGGGTGTCGCAAAGGTCCAAGGCT 97
||||||.|||||.||.|||||||||||.||.|||||.||.|||.|.||||
BL02629___yef 48 ATTTGAAGATTTAACACACGAAGGAGCCGGCGTCGCCAAAGTCGACGGCT 97
BSNT_01152 98 TTCCGATCTTCGTGCCGAACGCCCTGCCGGAGGAAAAAGCCCAAATCAAA 147
|.|||||.||||||||||||||.|||||.||.|||||.||.||.||.|||
BL02629___yef 98 TCCCGATTTTCGTGCCGAACGCGCTGCCTGACGAAAAGGCGCAGATTAAA 147
BSNT_01152 148 GTGACACGCGTCAAAAAAGGGTTCGCCTTCGGCCGTCTGATTGAGCTGAA 197
|||||.||.|||||||||||.||||||||||||||.||.||.||..||||
BL02629___yef 148 GTGACCCGGGTCAAAAAAGGCTTCGCCTTCGGCCGCCTCATCGACTTGAA 197
BSNT_01152 198 GGAAGAAAGCC-----CGCATAGAACGGACGCCCCATGCCCGATTTACAA 242
.|||||||||| ||| ||||||||.||.||||||||.|||||
BL02629___yef 198 AGAAGAAAGCCGCTTTCGC-----ACGGACGCGCCGTGCCCGATCTACAA 242
BSNT_01152 243 GCAATGCGGAGGCTGTCAGCTTCAGCACATGACCTACGAAGGACAGCTCC 292
|||.|||||.|||||.|||||.||||||||.|..||||||||.|||||.|
BL02629___yef 243 GCAGTGCGGCGGCTGCCAGCTGCAGCACATCAATTACGAAGGCCAGCTTC 292
BSNT_01152 293 TGTTTAAACAGAAACAAGTCAAAGACGTCTTAGAACGCATCGGCAAGCTG 342
|.|..||.|||||.||||||||||||||..|.||.||.|||||||||||.
BL02629___yef 293 TCTACAAGCAGAAGCAAGTCAAAGACGTGCTCGAGCGAATCGGCAAGCTC 342
BSNT_01152 343 GACCTTTCAAACG--TCACCGTGCACCCGACACTCGGCATGGAAGACCCT 390
|| |||.|..|| |||||||.||||||||.|||||||||||||||||.
BL02629___yef 343 GA--TTTAAGCCGGATCACCGTCCACCCGACCCTCGGCATGGAAGACCCG 390
BSNT_01152 391 TGGAACTACAGAAACAAAGCACAGGTGCCGGTAGGAGAACGCGAAGGCGG 440
|||||||||.||||||||||.|||||.||.||.||.|||.|.||||||||
BL02629___yef 391 TGGAACTACCGAAACAAAGCGCAGGTCCCTGTCGGCGAAAGAGAAGGCGG 440
BSNT_01152 441 ACTCGTCGCCGGATTTTATCAGCAAAGAAGCCATGACATCATCGAAATGA 490
.||..||||.||.||.||.|||||..|.||||||||.||||||||.||||
BL02629___yef 441 CCTGATCGCAGGCTTCTACCAGCAGCGCAGCCATGAGATCATCGACATGA 490
BSNT_01152 491 GCGCCTGCCTGATCCAGCAATCCAAAAACGATGAAGCCGTCCAAGCCGTC 540
.||..|||||||||||||||||..|||||||....|.|||.|||||..|.
BL02629___yef 491 ACGAATGCCTGATCCAGCAATCGGAAAACGACCGCGTCGTTCAAGCGATT 540
BSNT_01152 541 AAAGACATTTGCGCCAAATACGGTGTCAAAGCCTACAATGAAGAACGCCA 590
|||||.||.||||.|||||||||..|||||||.|||||.|||||||||||
BL02629___yef 541 AAAGAGATCTGCGGCAAATACGGCATCAAAGCGTACAACGAAGAACGCCA 590
BSNT_01152 591 CAAAGGCTGGCTCCGCCACATCATGGTCAGATACGGCGTTGTTACGGGCG 640
|||||||||||||.|.||||||||||||||||||||||..||.||.||||
BL02629___yef 591 CAAAGGCTGGCTCAGACACATCATGGTCAGATACGGCGCCGTCACAGGCG 640
BSNT_01152 641 AAATGATGATCGTCTTCATCACAAGAACGAACGATTTTCCGCATAAA-CG 689
||||||||.||||||||||||||||.||.|||||.||.|||||.||| ||
BL02629___yef 641 AAATGATGGTCGTCTTCATCACAAGGACAAACGACTTCCCGCACAAAGCG 690
BSNT_01152 690 AAGATCATCGAAGACATCACAGCGCAATTCCCGCACGTCAAATCCATCGT 739
||.|||.|||||||.|||||.|||..||||||||||||||||||.|||||
BL02629___yef 691 AAAATCGTCGAAGAGATCACCGCGGCATTCCCGCACGTCAAATCGATCGT 740
BSNT_01152 740 GCAAAACATCAACCCGAACAAAACAAACGTCATCTTCGGGAACGAAACAA 789
.|||||||||||||||||.||||||||||||||||||||..|||||||||
BL02629___yef 741 CCAAAACATCAACCCGAAAAAAACAAACGTCATCTTCGGCGACGAAACAA 790
BSNT_01152 790 ACGTCATCTGGGGCGAAGAATACATCTACGACCTCATCGGAGACGTCAAA 839
..|||||||||||.|||||||||||.||||||...|||||.|.|.|||||
BL02629___yef 791 CGGTCATCTGGGGAGAAGAATACATTTACGACACAATCGGCGGCATCAAA 840
BSNT_01152 840 TTCGCCATTTCCGCCAGATCGTTCTATCAGGTCAACCCGGAGCAGACAAA 889
||||||||.|||||.|||||||||||.||.||||||||.|||||.||.||
BL02629___yef 841 TTCGCCATCTCCGCTAGATCGTTCTACCAAGTCAACCCTGAGCAAACGAA 890
BSNT_01152 890 GGTGCTCTACGACAAAGCGCTTGAGTACGCTGAGCTTCAA-GGGGAAGAA 938
.|||||||||||||||||||||||.|||||.|| .||.|| ||.|||||.
BL02629___yef 891 AGTGCTCTACGACAAAGCGCTTGAATACGCCGA-ATTGAACGGCGAAGAG 939
BSNT_01152 939 ACCGTCATTGACGCCTACTGCGGCATCGGCACGATTTCTCTCTTCCTGGC 988
||||||||.|||||||||||||||||||||||||||||.||.||..|.||
BL02629___yef 940 ACCGTCATCGACGCCTACTGCGGCATCGGCACGATTTCGCTGTTTTTAGC 989
BSNT_01152 989 GAAGCAGGCGAAAAAAGTGTACGGTGTAG--------------------- 1017
||||||||||||.|||||||||||.||.|
BL02629___yef 990 GAAGCAGGCGAAGAAAGTGTACGGCGTTGAGATTGTGCCGGAAGCGATTG 1039
BSNT_01152 1017 -------------------------------------------------- 1017
BL02629___yef 1040 AGGATGCGAAGCGGAATGCTGAGTTGAATGGCATTGAGAACGCTGAGTTT 1089
BSNT_01152 1017 -------------------------------------------------- 1017
BL02629___yef 1090 GAAGTTGGCGAAGCTGAGGTCGTGATTCCGAAGTGGTATGAGGAAGGCAT 1139
BSNT_01152 1017 -------------------------------------------------- 1017
BL02629___yef 1140 TGCGGCTGACACGCTAGTGGTTGACCCGCCGCGCAAAGGCTGCGATGAGG 1189
BSNT_01152 1017 -------------------------------------------------- 1017
BL02629___yef 1190 CTTTGCTGCGGACGATTATTGAGATGAAGCCGAAGCGGGTTGTGTATGTG 1239
BSNT_01152 1017 -------------------------------------------------- 1017
BL02629___yef 1240 TCTTGCAACCCGGGAACCCTGGCGCGCGATTTGCGGGTGCTGGAGGATGG 1289
BSNT_01152 1017 -------------------------------------------------- 1017
BL02629___yef 1290 CGGGTATGTGACGCGTGAGGTACAGCCTGTTGATATGTTTCCGCATACGA 1339
BSNT_01152 1017 -------------------------------------------------- 1017
BL02629___yef 1340 GCCATGTGGAGTGTGTGACGAAGTTGGTTTTAAAAGGTGCAGTTGATTAA 1389
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