Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01985 and BL02628
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_01985___yjcK.1.5803.seq
# -bsequence dna-align/BL02628___yjcK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01985___yjcK-BL02628___yjcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01985___yjcK-BL02628___yjcK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01985___yjcK
# 2: BL02628___yjcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 575
# Identity: 369/575 (64.2%)
# Similarity: 369/575 (64.2%)
# Gaps: 61/575 (10.6%)
# Score: 1068.0
#
#
#=======================================
BSNT_01985___ 1 ATG-TTAAAA---GGAAAAACCATTTATGTTAGACCTTTAGAAG-TAACG 45
||| |||||| |||.||| ||||||..|.||.|| | |.|||
BL02628___yjc 1 ATGATTAAAAAAGGGACAAA-CATTTACATCAGGCC-------GCTCACG 42
BSNT_01985___ 46 ------GATGCCGAAGAAAATTTGCGGC----TGCAAAGCGAAAATCGGG 85
||.|||||.|.| |||..| ||||.|.||.|||.||..
BL02628___yjc 43 GCTGAAGACGCCGAGGCA----TGCCTCGAATTGCAGAACGCAAACCGCC 88
BSNT_01985___ 86 ATTTTTTCGAACAATTTTCTATGATACGCACAGACGATTACTATACGGTT 135
..||.||.|||||.|||||.|||...||.|..||.||.|..|||||..|.
BL02628___yjc 89 CGTTCTTTGAACAGTTTTCAATGGAGCGGAACGAGGAGTTTTATACAATC 138
BSNT_01985___ 136 GAGGGGC-AAAGAAAACGAATAACCGAGTATCAGGAAAGACTTGAGAAAG 184
||.||.| ||||||.|.|..|.|..||.||| |.||||...|.|||||.|
BL02628___yjc 139 GAAGGACAAAAGAAGAGGCTTCAAAGATTAT-ATGAAAATATGGAGAACG 187
BSNT_01985___ 185 ATGAAGAATATCATTTTGGCATCTTTACAGCGTCAGACGATAGATTAATC 234
|||||||.|||.||||||||||||||....||.||.|||||....|.|||
BL02628___yjc 188 ATGAAGATTATTATTTTGGCATCTTTGATCCGGCAAACGATGCGCTGATC 237
BSNT_01985___ 235 GGGACGGTTTCGCTCTTTCAAATCATCCGTGGAGCGC-------TGCAAA 277
||.|||.|....||.||.||| |||..|||| ||||||
BL02628___yjc 238 GGAACGATCAACCTTTTCCAA-------GTGCTGCGCGGTTCCTTGCAAA 280
BSNT_01985___ 278 CTGCGTTCATTGGGTATTTTTTAGA-CA-AAGCCCATAATGG-AAAGGAT 324
..||.|||||.||.||||||||.|| || ||| ||.||.|| |||||.|
BL02628___yjc 281 GCGCCTTCATCGGCTATTTTTTGGATCAGAAG--CACAACGGCAAAGGCT 328
BSNT_01985___ 325 ATTATGACAGAGGCAGTCAGATTGGTTGTTGATTATGCGTTCCACGAATT 374
| .|.|||.||.||.||||...||.|.||.||.|..||.||.|||||..|
BL02628___yjc 329 A-CACGACCGAAGCCGTCAAGCTGATGGTCGAGTTCGCCTTTCACGATCT 377
BSNT_01985___ 375 GAAACTGCATCGGATTGAAGCCGGTGTGATGCCCCGTAATCTCGGGTCCA 424
.||.||.|||||.||.||||||||.||.||||||||||||.|.|..||.|
BL02628___yjc 378 CAAGCTCCATCGCATCGAAGCCGGCGTCATGCCCCGTAATATTGCCTCGA 427
BSNT_01985___ 425 TGCGTGTTTTAGAAAAAGCGGGATTTCATAAAGAAGGCATCGCCCGAAAA 474
|.||.||..|.||.||.|||||.|||||.|||||||||||||||||.|||
BL02628___yjc 428 TCCGGGTGCTGGAGAAGGCGGGTTTTCACAAAGAAGGCATCGCCCGGAAA 477
BSNT_01985___ 475 AATGTAAAAATTAATGGCGTTTGGGAGGATCATCAAGTCCTTGCGATTCT 524
||.||.||.||.||.||....|||||.||||||||..|.||.||..|..|
BL02628___yjc 478 AACGTCAAGATCAACGGAAAATGGGAAGATCATCAGCTGCTGGCTGTGAT 527
BSNT_01985___ 525 GAATCC---TGATGACGAACAATAA 546
.||||| ||||.|.
BL02628___yjc 528 CAATCCGCATGATTAG--------- 543
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