Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04693 and BL02623

See Amino acid alignment / Visit BSNT_04693 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:52
# Commandline: needle
#    -asequence dna-align/BSNT_04693___yukD.1.5803.seq
#    -bsequence dna-align/BL02623___yukD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04693___yukD-BL02623___yukD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04693___yukD-BL02623___yukD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04693___yukD
# 2: BL02623___yukD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     177/250 (70.8%)
# Similarity:   177/250 (70.8%)
# Gaps:          20/250 ( 8.0%)
# Score: 644.0
# 
#
#=======================================

BSNT_04693___      1 ATGTATATTGATATTACAATAGATTTGAAACATTATAACGGCAGTGTCTT     50
                     .|||||.||||.|||||.||.|||||.||||||||..|||||||.|||||
BL02623___yuk      1 GTGTATGTTGACATTACCATCGATTTAAAACATTACGACGGCAGCGTCTT     50

BSNT_04693___     51 TGATCTCAGATTGTCAGATTACCACCCGGTGAAAAAAGTAATTGATATTG    100
                     |||.||||||.||||.||||||||..|.||.|||||.|||.|.||.||||
BL02623___yuk     51 TGACCTCAGACTGTCGGATTACCATTCTGTTAAAAAGGTAGTCGACATTG    100

BSNT_04693___    101 CTTGGCAGGCCCAAAGCGTATCTATGCCCCCGCGCGAAGGGCACTGGATC    150
                     |.|||||.|||.|||||.||.|..||||.||.||.|||||..|||||.|.
BL02623___yuk    101 CGTGGCAAGCCAAAAGCATACCGGTGCCTCCCCGGGAAGGCTACTGGGTA    150

BSNT_04693___    151 AGAGTGGTGAACAAGGATAAGGTGTTTTCCGGAGAAT----------GCA    190
                     ||.|||...||.||.|||...||.|||||.||.||||          |||
BL02623___yuk    151 AGGGTGACAAATAAAGATGCCGTTTTTTCAGGCGAATATACATTATCGCA    200

BSNT_04693___    191 AGCTGTCTGATTGCGGCATTACAAACGGAGACCGGCTTGAAATATTATGA    240
                     |          |||||.|||||.|..||.|||||.||.||||||||||||
BL02623___yuk    201 A----------TGCGGAATTACGACAGGTGACCGTCTGGAAATATTATGA    240


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