Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04694 and BL02622

See Amino acid alignment / Visit BSNT_04694 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:52
# Commandline: needle
#    -asequence dna-align/BSNT_04694.1.5803.seq
#    -bsequence dna-align/BL02622___yukE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04694-BL02622___yukE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04694-BL02622___yukE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04694
# 2: BL02622___yukE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     207/321 (64.5%)
# Similarity:   207/321 (64.5%)
# Gaps:          51/321 (15.9%)
# Score: 634.0
# 
#
#=======================================

BSNT_04694         1 ATGGCAGGATTAATTCGTGTCACACCCGAAGAGCTAAGAGCG----ATGG     46
                     |||.|||||.|.||||||||.||.||.|..||.||    |||    ||||
BL02622___yuk      1 ATGTCAGGAATCATTCGTGTTACGCCGGCTGAACT----GCGGCAAATGG     46

BSNT_04694        47 C-----GA-AGCAATACGGCGTTGAAAGCCAAGAAGT-ATTAAATCAGGT     89
                     |     || |.|||.|      .||||||..|||.|| |.| .|.|||||
BL02622___yuk     47 CTGACAGATATCAAAA------AGAAAGCGGAGATGTGACT-GAGCAGGT     89

BSNT_04694        90 ---TGATCGTTTAAACCGAATGATCTCTGATTTGAAA--AGC--------    126
                        |.|.|||.|..|.|.|||||||          ||  |||        
BL02622___yuk     90 CAATCAGCGTCTTGATCAAATGATC----------AACCAGCTTCAAGAT    129

BSNT_04694       127 ATGTGGGAAGGTGCTTCAAGCGAAGCGTTCGCAGATCAATACGAGCAGCT    176
                     |||||||||||||..||||||...||||||.||||.||||||.|..||||
BL02622___yuk    130 ATGTGGGAAGGTGAATCAAGCCGTGCGTTCTCAGAGCAATACCAAGAGCT    179

BSNT_04694       177 CAAACCTTCATTTATCAAAATGTCAGATTTGCTTCAA---GATGTGAATC    223
                     .|.||||||.|||||.||||||.|.||   .||||.|   ||.||...|.
BL02622___yuk    180 AAGACCTTCTTTTATTAAAATGGCTGA---ACTTCTAAGCGACGTTTCTA    226

BSNT_04694       224 AGCAGCTTGATCAAACAGCAAATACACTTGAGTCTACTGACCAAGACATC    273
                     |.||||||.||||.||.||.||.||.|||||....|||||||||||||||
BL02622___yuk    227 AACAGCTTCATCAGACTGCTAACACTCTTGAAAGCACTGACCAAGACATC    276

BSNT_04694       274 GCAAATCAAATCCGCGGATAA    294
                     ||.|..|||||||||||.|||
BL02622___yuk    277 GCTAGCCAAATCCGCGGCTAA    297


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