Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04684 and BL02616
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:50
# Commandline: needle
# -asequence dna-align/BSNT_04684___yueE.1.5803.seq
# -bsequence dna-align/BL02616___yueE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04684___yueE-BL02616___yueE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04684___yueE-BL02616___yueE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04684___yueE
# 2: BL02616___yueE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity: 412/537 (76.7%)
# Similarity: 412/537 (76.7%)
# Gaps: 12/537 ( 2.2%)
# Score: 1507.0
#
#
#=======================================
BSNT_04684___ 1 ATGAGAAAGGTTACATTAATGGATGTTTTCACCCATCCAATTGCACAAAA 50
||||||||.||.||.|||||||||||.||||||||||||||.||||||||
BL02616___yue 1 ATGAGAAACGTAACTTTAATGGATGTATTCACCCATCCAATCGCACAAAA 50
BSNT_04684___ 51 ATATCTTCA-GCGTTCCGGCGTGGCACATGCGATTGCCTGCGCTTATCAT 99
|||| ||.| .||||||||.||.||.|||||..|.||||||||.|||||.
BL02616___yue 51 ATAT-TTAACTCGTTCCGGTGTAGCTCATGCTGTAGCCTGCGCCTATCAC 99
BSNT_04684___ 100 GCATACAGGCTGTCTGTGAAGGCTGACATTA-ATCCTGATTTAGCAGCAA 148
.|||||.|.|||.|.|||...|||| .|.|| ||||.|||.|.||..|||
BL02616___yue 100 TCATACCGCCTGGCGGTGCGAGCTG-GAGTAGATCCCGATATCGCGACAA 148
BSNT_04684___ 149 AAGCGGCACTGCTTCATGACATTGGCCATTATGAATGGTATACAGACGGA 198
||||||||.||||.||.||.||.|||||||||||||||||.||.||||||
BL02616___yue 149 AAGCGGCATTGCTGCACGATATCGGCCATTATGAATGGTACACCGACGGA 198
BSNT_04684___ 199 AAGTGGGATTATGAGAAATACAAAAGAAATGACATTCATGCCATTAAAGG 248
.|.|||||||||||.||||||||...|||.||||||||.| ||.||||||
BL02616___yue 199 GAATGGGATTATGAAAAATACAAGCAAAACGACATTCACG-CAATAAAGG 247
BSNT_04684___ 249 G-GCGGAACGGGCGCATAAACTTCTGATTCGGCTTGGCGAGGAACCGAAA 297
| ||.||.||.||.||.||.|||||.||.||.||.|||||.||.|.||||
BL02616___yue 248 GAGCCGAGCGCGCCCACAAGCTTCTCATCCGCCTCGGCGAAGATCGGAAA 297
BSNT_04684___ 298 GCAGCAAAAGAGATTGCACTAGCCATTTTGCTTCATACAGATTCCTATTT 347
||.||.|||||||||||..|.||.|||.||||||||||.|||||||||||
BL02616___yue 298 GCGGCCAAAGAGATTGCTTTGGCGATTCTGCTTCATACGGATTCCTATTT 347
BSNT_04684___ 348 GCCTGAAGGCGAATTAGATAAAAACACACTGCAGCAGATTGTCAAAAAAG 397
|||.|||||.||..|.||||||||||..||||||||.||.||||||||||
BL02616___yue 348 GCCAGAAGGGGACCTTGATAAAAACAAGCTGCAGCAAATCGTCAAAAAAG 397
BSNT_04684___ 398 CGGACGAACTGGATGAAGAGCCGGGCGGCCACCATCATTACCGCCAAATT 447
||||.||.|||||.||||||||||||||..||||.|||||||||.||||.
BL02616___yue 398 CGGATGAGCTGGACGAAGAGCCGGGCGGAAACCACCATTACCGCAAAATC 447
BSNT_04684___ 448 GATCCTTCAACC--GCACGAAAAAAAATAGAAAAGCTGGACCAATTAATC 495
||||.| ||.| ||.|...|||||||....|||||.||||...|..||
BL02616___yue 448 GATCAT--AAGCTGGCGCTTGAAAAAATCCGGAAGCTTGACCGCATGGTC 495
BSNT_04684___ 496 GACCAAGCCCAGGCATCCGTGATAAAG-CCTGTATAA 531
||..||.||....|..||.||| |||| .|.||.|||
BL02616___yue 496 GATGAATCCTTATCTCCCATGA-AAAGAACGGTTTAA 531
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