Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04678 and BL02615
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:50
# Commandline: needle
# -asequence dna-align/BSNT_04678___yueF.1.5803.seq
# -bsequence dna-align/BL02615___yueF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04678___yueF-BL02615___yueF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04678___yueF-BL02615___yueF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04678___yueF
# 2: BL02615___yueF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1180
# Identity: 793/1180 (67.2%)
# Similarity: 793/1180 (67.2%)
# Gaps: 140/1180 (11.9%)
# Score: 2576.5
#
#
#=======================================
BSNT_04678___ 1 TTGTTGAAATCAAAAGTCCATTTTTGGACATTGCAGATTTTATTTGTTTT 50
|||||.|||||||||..||||||||||||..||||.||||||||.|||.|
BL02615___yue 1 TTGTTAAAATCAAAAACCCATTTTTGGACGCTGCAAATTTTATTGGTTCT 50
BSNT_04678___ 51 GCTGATTATTTTTGTAGCAACAAAAGTTTCATTTGTATTTC-AGCCGTTT 99
.||.||.||||.|||..|.||||||||.||.|||.| |||| |.|||.|.
BL02615___yue 51 TCTTATCATTTATGTGTCGACAAAAGTGTCTTTTCT-TTTCGAACCGATC 99
BSNT_04678___ 100 ATTGTTTTTATCTCGACATTGTTTTTCCCGATGCTGATTGCGGGAATTTT 149
||.||.|||...|||||..|.|||...|||||..|.|||||||||||.||
BL02615___yue 100 ATCGTATTTGCATCGACTCTATTTACTCCGATTTTAATTGCGGGAATCTT 149
BSNT_04678___ 150 GTATTTCATATTTAATCCGGTCGTCCGCCTGCTTGAAAAAAAAATTCCGC 199
||||||.|||||.||||||.||||.||.||.|||||.|||||..|.|||.
BL02615___yue 150 GTATTTTATATTCAATCCGATCGTGCGGCTTCTTGAGAAAAAGCTGCCGA 199
BSNT_04678___ 200 GGACATTATCCATTCTATTGATCTATTTACTGTTT---------ATC-GG 239
|.||..|.||||||||..||||||||||..||||| ||| ||
BL02615___yue 200 GAACGCTGTCCATTCTGCTGATCTATTTGGTGTTTGTGGCATTCATCGGG 249
BSNT_04678___ 240 TTTGCTTGCCTTTATT-TCAGCGTCAGTCGGACCTATCATCACCTCACAG 288
|||| |||| |||| |||||||.|||.|..|.||....|||
BL02615___yue 250 TTTG--------TATTGTCAG---CAGTCGGTCCTGTATTTACAAAGCAG 288
BSNT_04678___ 289 GTGACAGGGCTGTTTAACAA----CCTTCCTGATTATATAAAACAGATTC 334
||.||.|..|||||.||||| ||.||| |||.|.||||||||.|
BL02615___yue 289 GTTACCGATCTGTTCAACAACATCCCCTCC----TATGTGAAACAGATCC 334
BSNT_04678___ 335 AGGCGCTGACAAAGGATTTGTCCCATTCTCAATGGTTTACCTGGATGATG 384
||....|.|..|||.|..||||..||||.||.|||||.||.|||||.|||
BL02615___yue 335 AGATTTTCATTAAGCAAATGTCGAATTCGCAGTGGTTCACTTGGATAATG 384
BSNT_04678___ 385 AACCAGGATTATGTATCGATATCAAAAATTGAACAG-TCA---------- 423
||.|||||.|..||||||.|..|.|||||.||| || |||
BL02615___yue 385 AATCAGGACTTCGTATCGGTTGCCAAAATCGAA-AGCTCAATCGGCGAAT 433
BSNT_04678___ 424 --TTGACAAGTTTTCTCCAAAACTTGCCGCAAAATATCACGTCCAGTTTA 471
|||||.|| |.||||..|||||||.||....||..|.
BL02615___yue 434 ATTTGACGAG------------CCTGCCTGAAAATATTACAGGGAGCCTG 471
BSNT_04678___ 472 TCTGCGGTGTTTGGTGTCGTGACAAACA------TCACGCTTGTTATTAT 515
.||.|.||.||.||.||.|||||.|||| |||||..|| |
BL02615___yue 472 ACTTCTGTATTCGGCGTTGTGACCAACATTGCGCTCACGGCTG------T 515
BSNT_04678___ 516 TACTGTTCCATTTATCCTTTTTTACATGTTGAAAGACGGACACCGCTTTC 565
|||.||.||.||.|||||.|||||.|||.||||.|||||.|||||.||.|
BL02615___yue 516 TACCGTGCCGTTCATCCTGTTTTATATGCTGAAGGACGGCCACCGTTTCC 565
BSNT_04678___ 566 CGCATTTGGCAGTAAAAATTCTACCGGCTTCTTATCGGACA--------- 606
||.|||||||.||.||.||.||.| |.||||
BL02615___yue 566 CGAATTTGGCTGTCAAGATCCTGC-----------CTGACAAGTATAAAA 604
BSNT_04678___ 607 --GAAGGCTTAAAGATTTTTAAAGATTTATCCGATACGCTTGCGGCATAT 654
|||||..|.|||||||||||.|||||.|.|||.|||||.|||||.||.
BL02615___yue 605 ATGAAGGGCTGAAGATTTTTAAGGATTTGTACGAGACGCTGGCGGCTTAC 654
BSNT_04678___ 655 TTCCAGGGGCAGC----TGTTAATCTGTCTTTTTGTCGGAACAGCGTGTT 700
.|.||.||.|||| |||| |||||.||.||||||||.|||||.|
BL02615___yue 655 ATTCAAGGACAGCTCATTGTT----TGTCTGTTCGTCGGAACGGCGTGCT 700
BSNT_04678___ 701 TTATCGGCTATTTAATTGCCGGACTGCCGTATGCCCTGATTCTTGGGATT 750
|.|||||.|.||..||.|||||..||...||.||.||||||||.||| ||
BL02615___yue 701 TCATCGGTTTTTGGATCGCCGGTGTGAAATACGCGCTGATTCTCGGG-TT 749
BSNT_04678___ 751 G-TCATGGCGATTACCAATATCATTCCCTATGTCGGGCCTTTTCTCGGTG 799
| ||||.||..|.||.|||||.|||||.||||||||.||.|||||.||.|
BL02615___yue 750 GATCATTGCCGTGACGAATATTATTCCATATGTCGGACCGTTTCTTGGAG 799
BSNT_04678___ 800 CCGCGCCGGCTGTCATTGTCGGTTTTATGGACTCGCCGGCCAAAGCGCTG 849
|.||||||||.||||||.|||..|||.|.|||||||||.|.|||||..||
BL02615___yue 800 CGGCGCCGGCCGTCATTATCGCATTTCTCGACTCGCCGACGAAAGCATTG 849
BSNT_04678___ 850 TTTGCGATTATTGTGGTCGTCATCGTTCAGCAGCTGGACGGAAACCTGCT 899
.|.|||.|.||..|.|||||...||||||||||...|||||.||.|||||
BL02615___yue 850 ATCGCGCTGATCATCGTCGTTGCCGTTCAGCAGACAGACGGGAATCTGCT 899
BSNT_04678___ 900 GTCTCCTCTTGTGATCGGGAAGCGGC-TGAATACCCATCCGCTTACGATT 948
|||.||.||..|.||| ||..||.|| |||||||.||||||||.|||||.
BL02615___yue 900 GTCGCCGCTGATTATC-GGCCGCCGCTTGAATACGCATCCGCTGACGATC 948
BSNT_04678___ 949 AT--TTTGCTGTTAATCGGAGCGGGAAGCTTCGGCGGAATTCTCGGCATG 996
|| ||| |.||||||||.||.|||||||||||.||.||||||||||||
BL02615___yue 949 ATCCTTT--TATTAATCGGCGCCGGAAGCTTCGGAGGCATTCTCGGCATG 996
BSNT_04678___ 997 ATTTTAGCGGTGCCGGTTTATGCGGTAGTGAAGGCGTTCTTCC--TGAAT 1044
||..|.||.||.||||.||||||..|..|.||||| |.||.| |||||
BL02615___yue 997 ATCCTGGCCGTTCCGGCTTATGCCCTGCTCAAGGC--TTTTACATTGAAT 1044
BSNT_04678___ 1045 ATTGTCCG-CTTGATC-----AAGCTTCGCCAGCGGT-CACGACTCGAAG 1087
||.||||| |||| || || |.|||.||| .|..| |||
BL02615___yue 1045 ATCGTCCGCCTTG-TCCGTTTAA-----GGCAGAGGTATAAAA----AAG 1084
BSNT_04678___ 1088 AAAACGC---AAAGCCAG----CTGAATAG 1110
|||..|| |||.||.| ||||
BL02615___yue 1085 AAACGGCGGAAAATCCTGAAGTCTGA---- 1110
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