Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04675 and BL02614
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04675___yueH.1.5803.seq
# -bsequence dna-align/BL02614___yueH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04675___yueH-BL02614___yueH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04675___yueH-BL02614___yueH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04675___yueH
# 2: BL02614___yueH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity: 186/266 (69.9%)
# Similarity: 186/266 (69.9%)
# Gaps: 34/266 (12.8%)
# Score: 634.0
#
#
#=======================================
BSNT_04675___ 1 ATGAAAATCAGAAAAGCAAATATC--AATACGCAAACCGGAATGATCACG 48
|||||||||||.||.|||||.||| || |||.|.|.|.| ||||||||.
BL02614___yue 1 ATGAAAATCAGGAAGGCAAACATCTTAA-ACGAAGATCAG-ATGATCACA 48
BSNT_04675___ 49 GACGTGTATCTGCATGAAAACAGAAAAGAACTGCGCACGCTTGTAGCGGT 98
|||||.||.||.||||||||.|.|||.|||.|.|..||||||||.||.||
BL02614___yue 49 GACGTTTACCTCCATGAAAATAAAAAGGAATTTCATACGCTTGTGGCTGT 98
BSNT_04675___ 99 ACCGCAGCTGGAGTGGAGCACGATCATTTCCTATGAAGAAGATAAAGC-- 146
.|||||.|||||||||||||||.|.|||||||||||.|||||.|||||
BL02614___yue 99 GCCGCAACTGGAGTGGAGCACGCTGATTTCCTATGAGGAAGAAAAAGCAG 148
BSNT_04675___ 147 AACTCTGCCTGAACGGCTGGAAGCGTCGTTG-CGCCGGCATACAGAGGAA 195
||||| ||| |||..|||.||...|||.||| || |.||.||
BL02614___yue 149 AACTC-GCC-GAAAAGCTTGACCGGTCATTGTCG-------AAAGTGG-- 187
BSNT_04675___ 196 ACCCCT------------GCTGGTGAGCTGGCCAAAAAAATCATTCATTG 233
|| ||.|..||||||.|||||||.|||.|.||.||
BL02614___yue 188 ----CTGAGTCGGATGCGGCCGAGGAGCTGTCCAAAAAGATCGTACAATG 233
BSNT_04675___ 234 GGTAACAGAAATGTAA 249
|||.||.||||||||.
BL02614___yue 234 GGTGACCGAAATGTAG 249
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