Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04671 and BL02611
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04671___yueK.1.5803.seq
# -bsequence dna-align/BL02611___yueK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04671___yueK-BL02611___yueK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04671___yueK-BL02611___yueK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04671___yueK
# 2: BL02611___yueK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1502
# Identity: 1130/1502 (75.2%)
# Similarity: 1130/1502 (75.2%)
# Gaps: 61/1502 ( 4.1%)
# Score: 4168.0
#
#
#=======================================
BSNT_04671___ 1 GTGTTAGAGTACGGATTTAAAGATGACAGCCTGTCATTACATACAGACCT 50
||.||..||.|.||||.|||.|||||.||..||.||||.||||||||
BL02611___yue 1 ---TTGGAACACCGTTTTACAGACGACAGTCTAGCACTACACACAGACCT 47
BSNT_04671___ 51 TTATCAGATCAATATGGCGGAAACGTACTGGAGAGACGGCATTCATGAAA 100
.|||||.||.|||||||||||||||||.|||.|.|||||||||.||.|||
BL02611___yue 48 ATATCAAATTAATATGGCGGAAACGTATTGGCGCGACGGCATTGATCAAA 97
BSNT_04671___ 101 AGAAAGCGATTTTTGAGCTGTTTTTCAGAAGGCTTCCGTTTGAAAATGGC 150
|||||||..|.|||||.|||||||||||||.|||.||.|||||.|..||.
BL02611___yue 98 AGAAAGCCGTATTTGAACTGTTTTTCAGAAAGCTCCCTTTTGACAGCGGT 147
BSNT_04671___ 151 TATGCCGTATTTG-CGGGCTTGGAAAAAGCCATTGAATACTTGGAAAATT 199
|.||||||.|||| |||.||| ||||||||.|||||||..|||....|||
BL02611___yue 148 TTTGCCGTTTTTGCCGGTCTT-GAAAAAGCGATTGAATTTTTGCGGGATT 196
BSNT_04671___ 200 TCAAGTTTACGGATAGCGATTTGAG-TTATTTACAGGATGAACTCGGGTA 248
|||..|||||.||.|||||||| || |||||||.|.||.||.||.||.|.
BL02611___yue 197 TCAGATTTACTGAAAGCGATTT-AGTTTATTTAAAAGAAGAGCTGGGCTT 245
BSNT_04671___ 249 TCATGAAGATTTTATTGAATATTTGCGCGGCTT--------ATCT----T 286
|.|.||.||.||| |.|||||| ||.| |
BL02611___yue 246 TAAAGATGACTTT------------CTCGGCTTTTTAAAAGATATGAGAT 283
BSNT_04671___ 287 TTACAGGTTCACTTTACTCCATGAAAGAAGGAGAGCTCGTTTTTAACAAT 336
|.||.|||||.|||||.||.|||.|.|||||.||..||||.|||..|||.
BL02611___yue 284 TCACCGGTTCGCTTTATTCTATGCAGGAAGGCGAAATCGTGTTTGGCAAC 333
BSNT_04671___ 337 GAGCCGATTATGAGGGTGGAGGCACCCCTGGTAGAAGCGCAGCTGATTGA 386
||.|||||.||||||.|.||.||.||..|||..|||||||||||||||||
BL02611___yue 334 GAACCGATCATGAGGATCGAAGCGCCTTTGGCTGAAGCGCAGCTGATTGA 383
BSNT_04671___ 387 AACAGCTTTGCTCAACATTGTGAACTATCAAACATTAATTGCAACAAAGG 436
.||.|||.||||||||||||||||.||.||||||||.|||||.|||||.|
BL02611___yue 384 GACGGCTCTGCTCAACATTGTGAATTACCAAACATTGATTGCCACAAAAG 433
BSNT_04671___ 437 CTGCCCGGATTAAAGGCGTCATTGGTGATGAAGTTGCGCTTGAATTCGGA 486
|.||..|.||.|||.|.||.||.||.||.||....|||||||||||.|||
BL02611___yue 434 CGGCGAGAATCAAAAGTGTGATCGGAGAAGAGACGGCGCTTGAATTTGGA 483
BSNT_04671___ 487 ACAAGACGGGCGCACGAAATGGATGCGGCCATGTGGGGAGCGAGAGCAGC 536
|||||.||.|||||.||||||||.|||||.|||||||||||.|||||.||
BL02611___yue 484 ACAAGGCGCGCGCATGAAATGGACGCGGCGATGTGGGGAGCAAGAGCCGC 533
BSNT_04671___ 537 CTTAATCGGCGGCTTTAGCGCGACAAGCAATGTAAGAGCCGGAAAGCGCT 586
..|.||||||||.||...|||||||||||||||..|.|||||.|||||.|
BL02611___yue 534 GATTATCGGCGGATTCGACGCGACAAGCAATGTCCGCGCCGGCAAGCGGT 583
BSNT_04671___ 587 TTAATATCCCGGTTTCCGGCACACATGCGCATGCGCTTGTGCAGGCTTAC 636
||.|.||.|||||.||.|||||.||.||.|||||||||||.|||||.||.
BL02611___yue 584 TTGACATTCCGGTATCAGGCACGCACGCCCATGCGCTTGTACAGGCCTAT 633
BSNT_04671___ 637 CGCGATGAATATACAGCTTTCAAAAAATACGCGGAAACACATAAGGATTG 686
||||||||.||.||.||.||.||||||||.||||||||.|||||..|.||
BL02611___yue 634 CGCGATGAGTACACGGCATTTAAAAAATATGCGGAAACCCATAAAAAATG 683
BSNT_04671___ 687 CGTCTTCTTAGTTGACACGTATGACACGCTTCGTTCAGGCATGCCGAACG 736
.|||||.||.||.||.||.|||||.|||.|.|||||.|||||.||.||.|
BL02611___yue 684 TGTCTTTTTGGTCGATACATATGATACGGTGCGTTCCGGCATTCCAAATG 733
BSNT_04671___ 737 CGATTAGGGTTGCCAAGGAATTCGGCGACCGCATT-AATTTCATT--GGC 783
||||.|..||.||.||||||||||||||.|..||| |||| || ||.
BL02611___yue 734 CGATCAAAGTAGCAAAGGAATTCGGCGATCAAATTGAATT---TTCGGGA 780
BSNT_04671___ 784 ATCCGTCTGGACAGCGGCGATTTGGCGTACCTGTCAAAAAAAGCCCGGAA 833
|||||.|||||||||||.||..|.||.||..||||.||.||||| ||.
BL02611___yue 781 ATCCGCCTGGACAGCGGAGACCTCGCCTATTTGTCGAAGAAAGC---GAG 827
BSNT_04671___ 834 A---ATGCTTGATGAAGCAGGATTTACAGATGCGAAGGTGATTGCTTCAA 880
| |||||.||||||||.||||||||||||.|.||.||..||||.||||
BL02611___yue 828 AGCCATGCTGGATGAAGCCGGATTTACAGATACAAAAGTTGTTGCATCAA 877
BSNT_04671___ 881 GCGATTTGGATGAGCACACCATTATGAA-TTTAAAGGCTCAGGGAGCGCG 929
|||||.|.||||||.||||.|||||||| .||||| ||.|||||.||...
BL02611___yue 878 GCGATCTTGATGAGTACACGATTATGAACCTTAAA-GCCCAGGGTGCAAA 926
BSNT_04671___ 930 CATTGATGTCTGGGGTGTCGGTACGAAGCTGATCACTGCCTATGACCAGC 979
.||.||.||||||||.||.||.||.||||||||.||.||.||.|||||||
BL02611___yue 927 AATCGACGTCTGGGGCGTGGGCACAAAGCTGATTACCGCTTACGACCAGC 976
BSNT_04671___ 980 CGGCTCTCGGCGCAGTTTATAAACTCGTTGCCATTGAAGAAGACGGGAAA 1029
|||||||||||||.|||||.|||||.|||.|.||.|||||||||||.||.
BL02611___yue 977 CGGCTCTCGGCGCGGTTTACAAACTTGTTTCGATCGAAGAAGACGGAAAG 1026
BSNT_04671___ 1030 ATGGTCGACACGATCAAAATTTCGTCCAATCCTGAAAAAGTGACGACACC 1079
||||..||||||||.||||||||.||.|||||.||||||||||||||.||
BL02611___yue 1027 ATGGCAGACACGATTAAAATTTCTTCGAATCCGGAAAAAGTGACGACTCC 1076
BSNT_04671___ 1080 GGGC-AGAAAGAAAGTCTACCGCATTATTAATCAGTCCAACCATCATTCT 1128
.||| .|||| ||.||.|||.|.||.||.||||||...|||||||||||.
BL02611___yue 1077 AGGCTTGAAA-AAGGTGTACAGAATCATCAATCAGCTGAACCATCATTCA 1125
BSNT_04671___ 1129 GAAGGCGACTATATTGCGCTTT--ATGATGAGCGGGTGAATGATCAGAAG 1176
||||||||.||||| |||||| |..||||...|||.|||||.|||.||
BL02611___yue 1126 GAAGGCGATTATAT--CGCTTTGGACTATGAAAAGGTCAATGAACAGGAG 1173
BSNT_04671___ 1177 CGGCTCAGAATGTTCCACCCGGTTCATACATTCATCAGCAAATTTGTCAC 1226
|||||.|..|||||.|||||.||||||||.||.||||||||.|||||.||
BL02611___yue 1174 CGGCTGAAGATGTTTCACCCCGTTCATACGTTTATCAGCAAGTTTGTGAC 1223
BSNT_04671___ 1227 GAATTTTTATGCGAAGGATCTTCATGAGCTGATTTTTGAGAAAGGTATTC 1276
|||||||.|||||||.||||||||..|||.|||.|||||.|||||....|
BL02611___yue 1224 GAATTTTGATGCGAAAGATCTTCACCAGCCGATCTTTGAAAAAGGCGAGC 1273
BSNT_04671___ 1277 TTTGCTACCAAAACCCTGAGATTTCA-GACATACAGCAGTATGTGCAGGA 1325
||..|||..|.||.|| |||..|||| ||.||..|||.||||||.||.||
BL02611___yue 1274 TTGTCTATGAGAATCC-GAGCATTCAGGATATTAAGCGGTATGTTCAAGA 1322
BSNT_04671___ 1326 TAACCTCAGCCTGCTTTGGGAGGAATATAAGAGAATCAGCAAGCCGGAGG 1375
.||.|||||..||||||||||.||.||||||.|.|||||||||||.||.|
BL02611___yue 1323 AAATCTCAGTTTGCTTTGGGAAGAGTATAAGCGGATCAGCAAGCCCGAAG 1372
BSNT_04671___ 1376 AATACCCGGTTGATTTAAGCGAGGACTGCTGGAGCAATAAAATGCAGCGG 1425
||||.||.||.|||||||||||.|..|||||||.|||.||.|||||||..
BL02611___yue 1373 AATATCCTGTCGATTTAAGCGAAGCTTGCTGGAACAACAAGATGCAGCAA 1422
BSNT_04671___ 1426 ATCCACGAAGTGAAAAGCA----GAATTGAAGAAGAGCTTGAGGAAGAAT 1471
||.|||||||.|||||.|| || ||.|||..||.||..|||..|
BL02611___yue 1423 ATTCACGAAGCGAAAATCAAGGCGA----AAAAAGGTCTGGATCAAGGTT 1468
BSNT_04671___ 1472 AA 1473
.|
BL02611___yue 1469 GA 1470
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