Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04670 and BL02610

See Amino acid alignment / Visit BSNT_04670 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence dna-align/BSNT_04670___yuxH.1.5803.seq
#    -bsequence dna-align/BL02610___yuxH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04670___yuxH-BL02610___yuxH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04670___yuxH-BL02610___yuxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04670___yuxH
# 2: BL02610___yuxH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1286
# Identity:     866/1286 (67.3%)
# Similarity:   866/1286 (67.3%)
# Gaps:         121/1286 ( 9.4%)
# Score: 2743.5
# 
#
#=======================================

BSNT_04670___      1 ATGAGGGTGTTTGTTGCAAGACAGCCTATTTTTAATAGAAAAGAACAGGT     50
                     ||||||||.||.|||||.||||||||.||.||.||.|||||||||||.||
BL02610___yux      1 ATGAGGGTATTCGTTGCCAGACAGCCAATATTCAACAGAAAAGAACAAGT     50

BSNT_04670___     51 TGTTGCTTATGAACTGCTGTATAGAGAAAGCGAAGAGAACGTGTATAGCG    100
                     |||.||.||.||.||..|.||.||.||||||||..|.|||.|.|.|..||
BL02610___yux     51 TGTCGCATACGAGCTTTTATACAGGGAAAGCGAGAAAAACTTTTTTTCCG    100

BSNT_04670___    101 CTAAAGACGGCGATCAGGCAACAACAGATTTGGTGATCAACAGCTTTTTA    150
                     .||..|||||.|||||.||.||||||||.||..||||.||||||||||||
BL02610___yux    101 GTATTGACGGTGATCAAGCGACAACAGAATTAATGATTAACAGCTTTTTA    150

BSNT_04670___    151 AACATCGGAATTGAGAAGCTGACGGAAGGGAAACGCTGTTTTGTTAATTT    200
                     |||||.|||||.||.||..||||.|||||.|||.|.|.||..||.|||||
BL02610___yux    151 AACATTGGAATCGATAAATTGACAGAAGGCAAAAGGTATTACGTGAATTT    200

BSNT_04670___    201 TACGGAAAGCCTGATGTTTTCGAAT-----CTTCCCACCTCCTTCAATCC    245
                     |||.||     .|.|.||||.|.||     ||.||.||.|..||..|.||
BL02610___yux    201 TACCGA-----GGGTCTTTTGGCATCAGGGCTGCCGACGTATTTTGACCC    245

BSNT_04670___    246 GAAACAGCTTGTCATTGAAATCCTTGAAGATATACCGATCACGCCGGCCC    295
                     |.|.|||||.||..|.|||||||||||||||.|.|||||.||.|..|..|
BL02610___yux    246 GGATCAGCTCGTTGTGGAAATCCTTGAAGATGTGCCGATTACCCTTGAGC    295

BSNT_04670___    296 TCATTTCTAGATGCAAAGAATTGAAAAAAATGGGGTATATGCTGGCGCTT    345
                     |.||....||.||||...|.|||||||...|.||.||.|.|.|.||.||.
BL02610___yux    296 TTATCGAAAGGTGCAGGCATTTGAAAAGCCTCGGCTACACGATTGCACTC    345

BSNT_04670___    346 GATGATTTTTATGCAATAAACC--CGCAAGATGA-GGACTTACTGGAAAA    392
                     ||||||||||.|   .||||.|  |||..||.|| ||||||.||      
BL02610___yux    346 GATGATTTTTGT---TTAAAGCATCGCGTGAAGAGGGACTTGCT------    386

BSNT_04670___    393 ACTCATGAGCTAT--------ATTGATATATTGAAAATTGATTTTCTCAA    434
                       .|||.||||.|        ||||||||.|||||.||.||||||.||||
BL02610___yux    387 --CCATCAGCTTTTGGCATCCATTGATATTTTGAAGATCGATTTTTTCAA    434

BSNT_04670___    435 AACAACAC-GAATGGAACG-CAGAACAATTTTGCAAACCTACG-----GC    477
                     |||.||.| |.| ||||.| ||||.|         |.|||.||     ||
BL02610___yux    435 AACGACGCAGCA-GGAAAGACAGAGC---------ATCCTTCGATCATGC    474

BSNT_04670___    478 TG---CCGCGGCCTGATTTTTTTAGCGGAAAAAGTAGAGACCCGAAAAGA    524
                     .|   ||.|.||||||..||..|.||.||||||||.|||||.||||||||
BL02610___yux    475 CGTAACCACCGCCTGACGTTCCTCGCTGAAAAAGTGGAGACGCGAAAAGA    524

BSNT_04670___    525 ATATAAACAGGCGGTCCAAGACGGCTTTCAATTATTCCAAGGCTACTTTT    574
                     ||||.|.|||||.||..|||||||.|||||..|.||.||||||||.||.|
BL02610___yux    525 ATATGAGCAGGCTGTAAAAGACGGATTTCATCTGTTTCAAGGCTATTTCT    574

BSNT_04670___    575 TCAGCGAGCCGCGCATCA-------TCAGCGGGCATGACCTATCGACTCA    617
                     ||||||||||...|.|.|       |||  ||.|||.||.||     |||
BL02610___yux    575 TCAGCGAGCCTGTCGTGATTGACGGTCA--GGACATTACATA-----TCA    617

BSNT_04670___    618 TTTCTATTCTTACTATGAACTGCTTAACGAACTGAGTAAAGAGCAGCCTA    667
                     ||||.|..||||.|||||.|||||..|.|||.|.||..||||.||||||.
BL02610___yux    618 TTTCCACGCTTATTATGAGCTGCTGCATGAATTAAGCGAAGATCAGCCTG    667

BSNT_04670___    668 ACAT--AAAGCGTGTGACAGAGTA-CATAGAGCGGGATTTATCACTGTCC    714
                     |.||  |||.|  ||.||| |.|| .||||||||.|||||.||.||.||.
BL02610___yux    668 ATATTGAAAAC--GTCACA-AATATTATAGAGCGCGATTTGTCGCTTTCT    714

BSNT_04670___    715 TATCAAATTTTAAAATTTTTAAACTCATCCCA--CAGCCGTTTGAGCCAG    762
                     ||.||..|..|.||..|.||.||.||  .|||  ||.|||...||.|||.
BL02610___yux    715 TACCAGCTGCTGAAGCTGTTGAATTC--TCCAGCCAACCGGCCGATCCAA    762

BSNT_04670___    763 AAAATTGAAAGCATTCAACAGGCCATTATGCTGCTGGGATTTAATGAAAT    812
                     ||.|||.|||||||.|..|||||.||..||||.||.||||||||.|||||
BL02610___yux    763 AAGATTAAAAGCATCCGCCAGGCTATCGTGCTTCTCGGATTTAAAGAAAT    812

BSNT_04670___    813 CAAACGGTGGATATATATTCTTTCCTTTAAGGATTTAAGCAGGAAAGGGC    862
                     ||||.|||||||.|..||.||.||.||||||||||||   |.||||..||
BL02610___yux    813 CAAAAGGTGGATCTTCATCCTCTCATTTAAGGATTTA---ACGAAAAAGC    859

BSNT_04670___    863 ---ATTCCAGCAAGCACGAAATCATTAAGATTTCTCTGATAAGAGCAAAG    909
                        |.|||||||||.|||||.||.|.||||||||.|||||..|.||.|||
BL02610___yux    860 AAAACTCCAGCAAGAACGAAGTCGTCAAGATTTCGCTGATCCGCGCGAAG    909

BSNT_04670___    910 CTTTGCGAACTGTTGGCGAGAAAGACATTCCGGCCGCAGCCTGCTTCTTA    959
                     |||||||||.||.||||.|.|||.||...|||.||.|||||.||||||||
BL02610___yux    910 CTTTGCGAATTGCTGGCAAAAAAAACGAACCGCCCTCAGCCGGCTTCTTA    959

BSNT_04670___    960 TATGCTGATCGGAATGTTTTCTCTCATAGACACCCTCCTGCATAGAGGAA   1009
                     ||||||||..||.||||||||..|.||.||.||.||.|||||.|.||.|.
BL02610___yux    960 TATGCTGACAGGCATGTTTTCATTTATCGATACACTGCTGCACAAAGAAC   1009

BSNT_04670___   1010 TAGAGGAAATTGTTCA-AGAATTGCCTTTAAAAGATGAAGTCGGGCAAGC   1058
                     ||..||||.|.| ||| .|||.||||..|.|.|||.|||||.||.||.||
BL02610___yux   1010 TAACGGAAGTCG-TCAGCGAACTGCCGCTGACAGACGAAGTGGGCCAGGC   1058

BSNT_04670___   1059 ATTATTAGGCCATCAAAACGACTACTACCAAATGCTTG-AGCTTGTGAAA   1107
                     ..|..|.||..|..||||.||.|||....|||| |||| .|||||..|||
BL02610___yux   1059 GCTGCTCGGAAAAGAAAATGATTACCGAAAAAT-CTTGCGGCTTGCAAAA   1107

BSNT_04670___   1108 TTAATTGAAAGCAACAACTGGG--------ACACTTGCTCGGA---ATTA   1146
                     |..||.|||.|.|||.|.||||        ||||     ||||   |..|
BL02610___yux   1108 TCGATCGAACGAAACGAATGGGAAGACAACACAC-----CGGAGACAGAA   1152

BSNT_04670___   1147 GGCAATCAACTCGACAAAGAAGAAGCGTATGAATGTTATCTTGAGGCTCT   1196
                     |||  |.||||    |||||.||||||||..|.||.||||||||.|||.|
BL02610___yux   1153 GGC--TTAACT----AAAGATGAAGCGTACCAGTGCTATCTTGAAGCTGT   1196

BSNT_04670___   1197 GGAATGGTGTCATAA--TCTTATGGACGCAAAATGA   1230
                     .||.||||||||.||  ||||||      ||     
BL02610___yux   1197 TGATTGGTGTCAAAAGCTCTTAT------AA-----   1221


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