Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04670 and BL02610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04670___yuxH.1.5803.seq
# -bsequence dna-align/BL02610___yuxH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04670___yuxH-BL02610___yuxH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04670___yuxH-BL02610___yuxH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04670___yuxH
# 2: BL02610___yuxH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1286
# Identity: 866/1286 (67.3%)
# Similarity: 866/1286 (67.3%)
# Gaps: 121/1286 ( 9.4%)
# Score: 2743.5
#
#
#=======================================
BSNT_04670___ 1 ATGAGGGTGTTTGTTGCAAGACAGCCTATTTTTAATAGAAAAGAACAGGT 50
||||||||.||.|||||.||||||||.||.||.||.|||||||||||.||
BL02610___yux 1 ATGAGGGTATTCGTTGCCAGACAGCCAATATTCAACAGAAAAGAACAAGT 50
BSNT_04670___ 51 TGTTGCTTATGAACTGCTGTATAGAGAAAGCGAAGAGAACGTGTATAGCG 100
|||.||.||.||.||..|.||.||.||||||||..|.|||.|.|.|..||
BL02610___yux 51 TGTCGCATACGAGCTTTTATACAGGGAAAGCGAGAAAAACTTTTTTTCCG 100
BSNT_04670___ 101 CTAAAGACGGCGATCAGGCAACAACAGATTTGGTGATCAACAGCTTTTTA 150
.||..|||||.|||||.||.||||||||.||..||||.||||||||||||
BL02610___yux 101 GTATTGACGGTGATCAAGCGACAACAGAATTAATGATTAACAGCTTTTTA 150
BSNT_04670___ 151 AACATCGGAATTGAGAAGCTGACGGAAGGGAAACGCTGTTTTGTTAATTT 200
|||||.|||||.||.||..||||.|||||.|||.|.|.||..||.|||||
BL02610___yux 151 AACATTGGAATCGATAAATTGACAGAAGGCAAAAGGTATTACGTGAATTT 200
BSNT_04670___ 201 TACGGAAAGCCTGATGTTTTCGAAT-----CTTCCCACCTCCTTCAATCC 245
|||.|| .|.|.||||.|.|| ||.||.||.|..||..|.||
BL02610___yux 201 TACCGA-----GGGTCTTTTGGCATCAGGGCTGCCGACGTATTTTGACCC 245
BSNT_04670___ 246 GAAACAGCTTGTCATTGAAATCCTTGAAGATATACCGATCACGCCGGCCC 295
|.|.|||||.||..|.|||||||||||||||.|.|||||.||.|..|..|
BL02610___yux 246 GGATCAGCTCGTTGTGGAAATCCTTGAAGATGTGCCGATTACCCTTGAGC 295
BSNT_04670___ 296 TCATTTCTAGATGCAAAGAATTGAAAAAAATGGGGTATATGCTGGCGCTT 345
|.||....||.||||...|.|||||||...|.||.||.|.|.|.||.||.
BL02610___yux 296 TTATCGAAAGGTGCAGGCATTTGAAAAGCCTCGGCTACACGATTGCACTC 345
BSNT_04670___ 346 GATGATTTTTATGCAATAAACC--CGCAAGATGA-GGACTTACTGGAAAA 392
||||||||||.| .||||.| |||..||.|| ||||||.||
BL02610___yux 346 GATGATTTTTGT---TTAAAGCATCGCGTGAAGAGGGACTTGCT------ 386
BSNT_04670___ 393 ACTCATGAGCTAT--------ATTGATATATTGAAAATTGATTTTCTCAA 434
.|||.||||.| ||||||||.|||||.||.||||||.||||
BL02610___yux 387 --CCATCAGCTTTTGGCATCCATTGATATTTTGAAGATCGATTTTTTCAA 434
BSNT_04670___ 435 AACAACAC-GAATGGAACG-CAGAACAATTTTGCAAACCTACG-----GC 477
|||.||.| |.| ||||.| ||||.| |.|||.|| ||
BL02610___yux 435 AACGACGCAGCA-GGAAAGACAGAGC---------ATCCTTCGATCATGC 474
BSNT_04670___ 478 TG---CCGCGGCCTGATTTTTTTAGCGGAAAAAGTAGAGACCCGAAAAGA 524
.| ||.|.||||||..||..|.||.||||||||.|||||.||||||||
BL02610___yux 475 CGTAACCACCGCCTGACGTTCCTCGCTGAAAAAGTGGAGACGCGAAAAGA 524
BSNT_04670___ 525 ATATAAACAGGCGGTCCAAGACGGCTTTCAATTATTCCAAGGCTACTTTT 574
||||.|.|||||.||..|||||||.|||||..|.||.||||||||.||.|
BL02610___yux 525 ATATGAGCAGGCTGTAAAAGACGGATTTCATCTGTTTCAAGGCTATTTCT 574
BSNT_04670___ 575 TCAGCGAGCCGCGCATCA-------TCAGCGGGCATGACCTATCGACTCA 617
||||||||||...|.|.| ||| ||.|||.||.|| |||
BL02610___yux 575 TCAGCGAGCCTGTCGTGATTGACGGTCA--GGACATTACATA-----TCA 617
BSNT_04670___ 618 TTTCTATTCTTACTATGAACTGCTTAACGAACTGAGTAAAGAGCAGCCTA 667
||||.|..||||.|||||.|||||..|.|||.|.||..||||.||||||.
BL02610___yux 618 TTTCCACGCTTATTATGAGCTGCTGCATGAATTAAGCGAAGATCAGCCTG 667
BSNT_04670___ 668 ACAT--AAAGCGTGTGACAGAGTA-CATAGAGCGGGATTTATCACTGTCC 714
|.|| |||.| ||.||| |.|| .||||||||.|||||.||.||.||.
BL02610___yux 668 ATATTGAAAAC--GTCACA-AATATTATAGAGCGCGATTTGTCGCTTTCT 714
BSNT_04670___ 715 TATCAAATTTTAAAATTTTTAAACTCATCCCA--CAGCCGTTTGAGCCAG 762
||.||..|..|.||..|.||.||.|| .||| ||.|||...||.|||.
BL02610___yux 715 TACCAGCTGCTGAAGCTGTTGAATTC--TCCAGCCAACCGGCCGATCCAA 762
BSNT_04670___ 763 AAAATTGAAAGCATTCAACAGGCCATTATGCTGCTGGGATTTAATGAAAT 812
||.|||.|||||||.|..|||||.||..||||.||.||||||||.|||||
BL02610___yux 763 AAGATTAAAAGCATCCGCCAGGCTATCGTGCTTCTCGGATTTAAAGAAAT 812
BSNT_04670___ 813 CAAACGGTGGATATATATTCTTTCCTTTAAGGATTTAAGCAGGAAAGGGC 862
||||.|||||||.|..||.||.||.|||||||||||| |.||||..||
BL02610___yux 813 CAAAAGGTGGATCTTCATCCTCTCATTTAAGGATTTA---ACGAAAAAGC 859
BSNT_04670___ 863 ---ATTCCAGCAAGCACGAAATCATTAAGATTTCTCTGATAAGAGCAAAG 909
|.|||||||||.|||||.||.|.||||||||.|||||..|.||.|||
BL02610___yux 860 AAAACTCCAGCAAGAACGAAGTCGTCAAGATTTCGCTGATCCGCGCGAAG 909
BSNT_04670___ 910 CTTTGCGAACTGTTGGCGAGAAAGACATTCCGGCCGCAGCCTGCTTCTTA 959
|||||||||.||.||||.|.|||.||...|||.||.|||||.||||||||
BL02610___yux 910 CTTTGCGAATTGCTGGCAAAAAAAACGAACCGCCCTCAGCCGGCTTCTTA 959
BSNT_04670___ 960 TATGCTGATCGGAATGTTTTCTCTCATAGACACCCTCCTGCATAGAGGAA 1009
||||||||..||.||||||||..|.||.||.||.||.|||||.|.||.|.
BL02610___yux 960 TATGCTGACAGGCATGTTTTCATTTATCGATACACTGCTGCACAAAGAAC 1009
BSNT_04670___ 1010 TAGAGGAAATTGTTCA-AGAATTGCCTTTAAAAGATGAAGTCGGGCAAGC 1058
||..||||.|.| ||| .|||.||||..|.|.|||.|||||.||.||.||
BL02610___yux 1010 TAACGGAAGTCG-TCAGCGAACTGCCGCTGACAGACGAAGTGGGCCAGGC 1058
BSNT_04670___ 1059 ATTATTAGGCCATCAAAACGACTACTACCAAATGCTTG-AGCTTGTGAAA 1107
..|..|.||..|..||||.||.|||....|||| |||| .|||||..|||
BL02610___yux 1059 GCTGCTCGGAAAAGAAAATGATTACCGAAAAAT-CTTGCGGCTTGCAAAA 1107
BSNT_04670___ 1108 TTAATTGAAAGCAACAACTGGG--------ACACTTGCTCGGA---ATTA 1146
|..||.|||.|.|||.|.|||| |||| |||| |..|
BL02610___yux 1108 TCGATCGAACGAAACGAATGGGAAGACAACACAC-----CGGAGACAGAA 1152
BSNT_04670___ 1147 GGCAATCAACTCGACAAAGAAGAAGCGTATGAATGTTATCTTGAGGCTCT 1196
||| |.|||| |||||.||||||||..|.||.||||||||.|||.|
BL02610___yux 1153 GGC--TTAACT----AAAGATGAAGCGTACCAGTGCTATCTTGAAGCTGT 1196
BSNT_04670___ 1197 GGAATGGTGTCATAA--TCTTATGGACGCAAAATGA 1230
.||.||||||||.|| |||||| ||
BL02610___yux 1197 TGATTGGTGTCAAAAGCTCTTAT------AA----- 1221
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