Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04667 and BL02609

See Amino acid alignment / Visit BSNT_04667 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence dna-align/BSNT_04667___degQ.1.5803.seq
#    -bsequence dna-align/BL02609___degQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04667___degQ-BL02609___degQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04667___degQ-BL02609___degQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04667___degQ
# 2: BL02609___degQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     104/144 (72.2%)
# Similarity:   104/144 (72.2%)
# Gaps:           6/144 ( 4.2%)
# Score: 362.0
# 
#
#=======================================

BSNT_04667___      1 ATGGAAAAGAAAC---TTGAAGAAGTAAAACAATTGTTATTCCGACTCGA     47
                     .||||||||.|||   ||||||||.||||||||.||.|.|..||.||.||
BL02609___deg      1 GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGA     50

BSNT_04667___     48 ACTTGATATTAAAGAAACGACAGATTCATTACGAAACATTAACAAAAGCA     97
                     ...|||.||.|.||||||.|..||.||.||.||.||.|||||||||||||
BL02609___deg     51 GAATGAAATCAGAGAAACAAAGGACTCCTTGCGCAAGATTAACAAAAGCA    100

BSNT_04667___     98 TTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA    141
                     ||||||||..||||||.||||..|||   .|.||||..||||.|
BL02609___deg    101 TTGATCAATACGATAAGTACACATAT---CTAAAAACCTCGTAA    141


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