Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04661 and BL02604
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04661___comA.1.5803.seq
# -bsequence dna-align/BL02604___comA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04661___comA-BL02604___comA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04661___comA-BL02604___comA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04661___comA
# 2: BL02604___comA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 676
# Identity: 490/676 (72.5%)
# Similarity: 490/676 (72.5%)
# Gaps: 68/676 (10.1%)
# Score: 1782.5
#
#
#=======================================
BSNT_04661___ 1 ATGAAAAAGA-TACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCA 49
||| |.|||| ||||.|||||.|||||.|||||||||||||||||.||.|
BL02604___com 1 ATG-AGAAGATTACTTGTGATCGATGATCATCCGGCTGTCATGGAGGGGA 49
BSNT_04661___ 50 CCAAGACAATTTTGGAAACGGATTC---GAATTTGTCTGTTGATTGTCTC 96
|.|||.|||||.|.||||||.| | ||.||||| |||.|||||.|||
BL02604___com 50 CGAAGGCAATTCTTGAAACGAA--CCAGGACTTTGT-TGTCGATTGCCTC 96
BSNT_04661___ 97 AGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATA 146
||.||||||.|.||||||||.|||.|||||.|.||||||||.||..|.||
BL02604___com 97 AGCCCTGAAGCCAGCGAACAATTTCTCAAGAAACATGATTTTTCTGCGTA 146
BSNT_04661___ 147 TGATCTCATTTTAATGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGG 196
|||.||.||.|||||||||.|.|||.| .||.||..||||.||.||||
BL02604___com 147 TGACCTGATCTTAATGGATTTAAATTT---GGGTGAAATCAACGGCATGG 193
BSNT_04661___ 197 AGCTTTCTAAACAGAT--TTTACAAGAGA-ATCCTCAT--TGTAAAATTA 241
|.||.|||||..|.|| || |||| ||..|||| ||.|||||||
BL02604___com 194 ACCTATCTAAGAAAATCCTT-----GAGACATGTTCATCATGCAAAATTA 238
BSNT_04661___ 242 TCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGT 291
||||.||.||.||.|||||.|||||.||||||||.||.||.|||||||||
BL02604___com 239 TCGTTTACACAGGCTATGAAGTCGAAGATTATTTTGAAGAGGCGATTCGT 288
BSNT_04661___ 292 GCGGGTCTGCACGGTGCCATCAGCAAAACGGAATCTAAAGAAAAGATCAC 341
.|.||..|||||||.||||||||||||||||||||.||.||||||||.|.
BL02604___com 289 TCCGGCATGCACGGCGCCATCAGCAAAACGGAATCGAAGGAAAAGATTAT 338
BSNT_04661___ 342 CCAATACATATACCACGTACTCAATGGA----GAAATTTTAGTCGATTTT 387
..|.||||||||.||.||.| |||| .|||||.|.|||||||.|
BL02604___com 339 AGAGTACATATATCAGGTTC----TGGATAATAAAATTGTCGTCGATTAT 384
BSNT_04661___ 388 GCTTACTTTAAACAGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTC 437
|.|||.||.||.|||.||||.||.|||||||||.|.|||
BL02604___com 385 GATTATTTCAAGCAGTTGATTACACAGCAAAAATCGAAG----------- 423
BSNT_04661___ 438 CTCTCAAA-------AAGAACAAGATGTGCTCAC-ACCT----------A 469
||||| .|||.|.|| ||| |||| |
BL02604___com 424 ---TCAAACAGCCAGCAGACCCAG-------CACGACCTCTTGACTGAAA 463
BSNT_04661___ 470 GAGAATGCCTGATTCTTCAAGAAGTTGAAAAAGGATTTACAAACCAAGAA 519
|.||||||||||||.|..|||||||.||||||||.|..|||||.||.|||
BL02604___com 464 GGGAATGCCTGATTTTAAAAGAAGTCGAAAAAGGCTACACAAATCAGGAA 513
BSNT_04661___ 520 ATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATACAGCTTGAC 569
||.||.|||||.||||||||||||||||||||.||.||||||||||||||
BL02604___com 514 ATTGCTGATGCGCTTCATTTAAGCAAGCGGTCGATCGAATACAGCTTGAC 563
BSNT_04661___ 570 ATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGA 619
.||..|.||||..|||||||||||.||.|||.||||.||.||.|||||.|
BL02604___com 564 TTCCGTATTCAGCAAGCTGAATGTAGGATCAAGGACAGAGGCTGTTTTAA 613
BSNT_04661___ 620 TAGCGAAATCAGACGGTGTACTTTAA 645
|.||||||||.||.||||||||.|.|
BL02604___com 614 TCGCGAAATCTGAAGGTGTACTCTGA 639
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