Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04660 and BL02603
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04660___yuxO.1.5803.seq
# -bsequence dna-align/BL02603___yuxO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04660___yuxO-BL02603___yuxO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04660___yuxO-BL02603___yuxO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04660___yuxO
# 2: BL02603___yuxO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 274/404 (67.8%)
# Similarity: 274/404 (67.8%)
# Gaps: 34/404 ( 8.4%)
# Score: 896.0
#
#
#=======================================
BSNT_04660___ 1 ATGATGGATACGAAACACACATTGCTTGAAGCGCTTGGTATAGAGATTGT 50
|||||.||||||||.|||.|.|||||||||.|.||.||.|| ||
BL02603___yux 1 ---ATGGAAACGAAACATACACTTCTTGAAGCGTTGGGAATCGA----GT 43
BSNT_04660___ 51 TGAA--AACACAGC--GGAACGATGCGTTGCGGTCATGCCGGTGGATCAT 96
|||| |...|||| .|||||.||.|||||.||||||||.||.|||.|.
BL02603___yux 44 TGAAGGAGTGCAGCAAAGAACGGTGTGTTGCCGTCATGCCTGTCGATGAA 93
BSNT_04660___ 97 CGGACG-GTGCAGCCGTTCGGATATTTGCATGGGGGCGCTTCAGTGGCCC 145
.|.||| || |||||.|||||.|||.||||.||.|||||.||.||.||.|
BL02603___yux 94 AGAACGCGT-CAGCCTTTCGGCTATCTGCACGGAGGCGCGTCCGTTGCGC 142
BSNT_04660___ 146 TGGCGGAAACAGCGGCGAGCGCAGGTGCACAGAACCTGATTGATCATTCA 195
|.||.|||||.|.|||.|||...||.|||.|..|.|..||.|||| ||
BL02603___yux 143 TCGCTGAAACGGTGGCAAGCATCGGGGCATATCAGCATATCGATC---CA 189
BSNT_04660___ 196 ACA---CAGGCTTGTGTCGGTTTGGAGATTAACGCCAACCATTTAAAATC 242
|.| |||||.||..||||..|.|||||.||||||||||||.|.|||||
BL02603___yux 190 AAAGAGCAGGCATGCTTCGGGCTTGAGATCAACGCCAACCATATTAAATC 239
BSNT_04660___ 243 TGTAAAGGAAGGAACGGTAAAGGCGATAGCCGAGCCCGTTCATATCGGCA 292
.|||||.||.||||||||.||.|||.|.||...|||..|.|||.|.||||
BL02603___yux 240 GGTAAAAGACGGAACGGTTAAAGCGGTCGCTACGCCTCTGCATGTGGGCA 289
BSNT_04660___ 293 GAACGACGATTGTCTATCACATTCACATATATGACGAGCAAGAGAGGCTG 342
.|.|.||.||.||.|.|||.|||.|||||...||.|||||.||.||.|||
BL02603___yux 290 AATCAACAATGGTGTTTCAAATTGACATACGCGATGAGCAGGACAGCCTG 339
BSNT_04660___ 343 ATCTGTATATCCAGATGCACGCTGGCTGTCATCA------------AGAA 380
||.||.|..|||||.||||||.||||.||||||| .|.|
BL02603___yux 340 ATTTGCACGTCCAGGTGCACGATGGCGGTCATCAGCCGTCCTTCATCGTA 389
BSNT_04660___ 381 ATAA 384
|
BL02603___yux 390 A--- 390
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