Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04641 and BL02600

See Amino acid alignment / Visit BSNT_04641 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:47
# Commandline: needle
#    -asequence dna-align/BSNT_04641.1.5803.seq
#    -bsequence dna-align/BL02600___yufK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04641-BL02600___yufK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04641-BL02600___yufK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04641
# 2: BL02600___yufK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 593
# Identity:     396/593 (66.8%)
# Similarity:   396/593 (66.8%)
# Gaps:          70/593 (11.8%)
# Score: 1247.0
# 
#
#=======================================

BSNT_04641         1 ATGAAAAATACTTATTTGACAGGATATTTTCCGCTGATTGCGATCCTGCT     50
                     |||||||||||.|||.|.|||||.|.||||||..|.||.||.||.||.||
BL02600___yuf      1 ATGAAAAATACGTATGTAACAGGCTTTTTTCCTTTTATCGCAATTCTTCT     50

BSNT_04641        51 TTTTAGTTCGTC-CTTATCCATCTCAACTTCACTT---TATGCGTTGAAG     96
                     |||.|||||.|| ||| .|.||.|   ||||..||   |||||..||.||
BL02600___yuf     51 TTTCAGTTCATCTCTT-GCGATTT---CTTCCGTTATCTATGCCATGCAG     96

BSNT_04641        97 ATGCTGTCTTCATTTGGAATGTATGATGGAATGCTCGATTATTTTTCAGA    146
                     |||||||||||..|.||.||.||..|.||.||||||||.|.|||.||.||
BL02600___yuf     97 ATGCTGTCTTCTCTCGGCATCTACAAAGGGATGCTCGAATTTTTCTCTGA    146

BSNT_04641       147 GAAAGGAATCAGGCTTGCGTTATTTGCTGCCTTTGCACTTTTATATTTTA    196
                     ||..||.|||.||.|.||.||.|||||||..|||.|.||..|.|.|||.|
BL02600___yuf    147 GAGCGGCATCCGGATGGCTTTGTTTGCTGTGTTTACGCTGATTTTTTTCA    196

BSNT_04641       197 TGGTTCTGTCCGCTCTGAAATTAATTGCAAATACCGTGACCGAGCTGTCA    246
                     ||||..|.||||||.||||..|.|||||.|||||.|||||.||||     
BL02600___yuf    197 TGGTATTTTCCGCTTTGAAGCTGATTGCCAATACAGTGACAGAGC-----    241

BSNT_04641       247 TTGC-----TGTTTTTTGCTAATGATCCGGAAGGGAAC-AACCTGAAAAA    290
                     ||||     |.||||||||.||.|||||.||| |||.| ||.||||.|||
BL02600___yuf    242 TTGCCCTTTTATTTTTTGCCAAAGATCCTGAA-GGAGCGAATCTGAGAAA    290

BSNT_04641       291 ACTCAGAATGGGTT---CCATGATTTATTTGGGCGGCGGGATTTTATCCT    337
                     |.||||.||.||||   ||.||   |||.|.||.|...|..|||||||.|
BL02600___yuf    291 AATCAGGATCGGTTCTGCCGTG---TATCTAGGAGCAAGCCTTTTATCTT    337

BSNT_04641       338 TTGTGCTCTTG--CAAAATGTC-----ATTTG----GATTGTGATCTGGT    376
                     ||.|  |.|||  |||.|||.|     |.|||    |.||.|       |
BL02600___yuf    338 TTAT--TTTTGTCCAATATGCCGCGGGAATTGCAGCGCTTTT-------T    378

BSNT_04641       377 TTGCGGTCGTCACGCTCGCTTACTTTGTGTTTACCGTATACCGGATTTAT    426
                     ||.|  |||..||.||||..||.|||.|.||||.||         |||||
BL02600___yuf    379 TTAC--TCGCAACTCTCGTATATTTTATTTTTATCG---------TTTAT    417

BSNT_04641       427 TCG---------ACGCTTTCTCTCATGTCATTAGTTGGATTCATTCTATT    467
                     .||         ||||||||..|||||||||||.|.||.||.|||.|.||
BL02600___yuf    418 ACGATCCACAGCACGCTTTCATTCATGTCATTAATCGGTTTTATTATGTT    467

BSNT_04641       468 GGAACTGCTGTTTTGGTTTACCTTTGTTATCGGTATTCTGTTCATAT--T    515
                     .||.|||||||||||||||||.|||.|.|||||.|  |.||..||||  |
BL02600___yuf    468 TGAGCTGCTGTTTTGGTTTACGTTTATGATCGGGA--CGGTGTATATCAT    515

BSNT_04641       516 TATCAAGCTTTATAATAGCATAATGGCTAGCTTACCTGTGTAA    558
                     .||||||||||||||.|||.|.|||||.|||.|.||.||.|.|
BL02600___yuf    516 CATCAAGCTTTATAACAGCGTCATGGCGAGCCTGCCCGTTTGA    558


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