Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04631 and BL02596

See Amino acid alignment / Visit BSNT_04631 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:46
# Commandline: needle
#    -asequence dna-align/BSNT_04631___yugE.1.5803.seq
#    -bsequence dna-align/BL02596___yugE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04631___yugE-BL02596___yugE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04631___yugE-BL02596___yugE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04631___yugE
# 2: BL02596___yugE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     177/288 (61.5%)
# Similarity:   177/288 (61.5%)
# Gaps:          51/288 (17.7%)
# Score: 514.0
# 
#
#=======================================

BSNT_04631___      1 ---------ATGGAAGAAAGTCAAGCGGTCAG-GGAAATGATTAAGATCA     40
                              |||.||||||||||.||.| ||| ..||||.||..|.||||
BL02596___yug      1 GTGATCATGATGAAAGAAAGTCAGGCAG-CAGCACAAATCATACACATCA     49

BSNT_04631___     41 TTGCCA----AATGGGACCCGTTTAAATATGGAGAAGAGTTTTACGAAAC     86
                     |    |    |||||||.||||||.||...|||...||.|||||.|||||
BL02596___yug     50 T----AAAGGAATGGGATCCGTTTCAAGCCGGACCCGATTTTTATGAAAC     95

BSNT_04631___     87 GGAGGCTGTTGATGTCGTGCAGGCAGTCTATGATGAAGACGATCCCGA-C    135
                     |||.||.|..||..||||.|||||.||||||...|||||||||.|.|| |
BL02596___yug     96 GGAAGCGGCCGAAATCGTTCAGGCCGTCTATACGGAAGACGATGCAGAGC    145

BSNT_04631___    136 GTGCT-GGCGAAAAGC-ATTCAGCAAATATTTGAAACTTCTTTTGAACAA    183
                     | ||| ||||  |||| ||.|||....|.||||||...||.|||||.||.
BL02596___yug    146 G-GCTGGGCG--AAGCGATCCAGACCGTTTTTGAAGTATCGTTTGATCAG    192

BSNT_04631___    184 ACGCTGCCGATCGACAGCTGCCGGGAAG--------TGGCTGGCCAGCTT    225
                     ||||||||        .|||.|||.|.|        ||||||..|.|||.
BL02596___yug    193 ACGCTGCC--------TCTGTCGGAATGCAAACGGCTGGCTGAACGGCTC    234

BSNT_04631___    226 TTATTCATTAAAAACAGCAGCTCCTGC--ACGCCTTAA    261
                     .|..|.||.|||.|||||||.||.|||  |        
BL02596___yug    235 CTTGTGATCAAAGACAGCAGTTCGTGCTGA--------    264


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