Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04627 and BL02595
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04627___alaR.1.5803.seq
# -bsequence dna-align/BL02595___alaR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04627___alaR-BL02595___alaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04627___alaR-BL02595___alaR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04627___alaR
# 2: BL02595___alaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity: 400/503 (79.5%)
# Similarity: 400/503 (79.5%)
# Gaps: 4/503 ( 0.8%)
# Score: 1583.0
#
#
#=======================================
BSNT_04627___ 1 ATGAAATTGACAGAAAAAGAAACAGAAATATTAGAAATTTTAGACGAAAA 50
|||||..|.|||||||||||||||||||||||.|||||.|||||.|||||
BL02595___ala 1 ATGAAGCTAACAGAAAAAGAAACAGAAATATTGGAAATATTAGAGGAAAA 50
BSNT_04627___ 51 CAGCCGCGCCGATTTAGAAACAATCGCAAAGATGGCGGGCA--TCCCTGT 98
|||||||..|||....|||||.||.||.||.||||||..|| ||.|.|.
BL02595___ala 51 CAGCCGCCTCGAACCTGAAACGATTGCTAAAATGGCGAACATTTCACAGG 100
BSNT_04627___ 99 AAATGAAGTAAAAACAATTATTGACAAACTGGAGAAAGAAAAGGTTATTA 148
|| |||..||||.|.||||||||.||.||.||.|||||||||||.||.|
BL02595___ala 101 AA--GAAACAAAAGCGATTATTGAAAAGCTTGAAAAAGAAAAGGTCATCA 148
BSNT_04627___ 149 TCGATTATTCCGCTATGATTGATTGGCGAAAAGTAGACGGACATGAGGGC 198
||||||||||.||.|||||.||.|||||||||||.|||||.|||||.|||
BL02595___ala 149 TCGATTATTCTGCAATGATCGACTGGCGAAAAGTCGACGGCCATGAAGGC 198
BSNT_04627___ 199 GTTACGGCCATGATCGACGTCAAAGTAACGCCGAAGCGGGGCGTCGGTTT 248
||.||.||.||||||||.||.|||||||||||||||||.||||||||.||
BL02595___ala 199 GTGACAGCGATGATCGATGTGAAAGTAACGCCGAAGCGCGGCGTCGGATT 248
BSNT_04627___ 249 TGATGAAGTGGCGGAACGGATTTACCGATTCCAAGAGGTTGAATCAGTTT 298
|||.||||||||.||.||||||||.||.||.||.||.||||||||.||||
BL02595___ala 249 TGACGAAGTGGCCGAGCGGATTTATCGTTTTCAGGAAGTTGAATCCGTTT 298
BSNT_04627___ 299 ACCTGATGTCAGGCGTATACGATTTGTCTGTCGTGATTCGCGGCAATTCG 348
||.||||||||||||||||.||..|||||||.||.||.|||||||...||
BL02595___ala 299 ACTTGATGTCAGGCGTATATGACCTGTCTGTTGTCATCCGCGGCAGAACG 348
BSNT_04627___ 349 ATGTCTGACGTAGCGCGTTTTGTTTCGGATAAACTCTCAACGCTTGATTC 398
|||||.||..|..|||.|||.||.||.||.|||.|.||.||||||||.||
BL02595___ala 349 ATGTCGGATATTTCGCATTTCGTGTCCGAAAAATTATCGACGCTTGAATC 398
BSNT_04627___ 399 AGTTGTTTCTACGACAACCCATTTTATCCTGAAAAAATACAAGCATGACG 448
.||.||.||.||.||.|||||.|||||..|.||.||||||||||||||||
BL02595___ala 399 GGTCGTGTCGACAACCACCCACTTTATTTTAAAGAAATACAAGCATGACG 448
BSNT_04627___ 449 GCAAAGTGTTTGAAACAGGAGACGACGACAAAAGAATCGTGGTGTCACCG 498
|.|||||.|||||..|.||.||.||.||||||||||||||||||||.||.
BL02595___ala 449 GTAAAGTTTTTGACTCCGGTGATGATGACAAAAGAATCGTGGTGTCTCCT 498
BSNT_04627___ 499 TAA 501
|||
BL02595___ala 499 TAA 501
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