Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04626 and BL02594
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04626___alaT.1.5803.seq
# -bsequence dna-align/BL02594___alaT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04626___alaT-BL02594___alaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04626___alaT-BL02594___alaT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04626___alaT
# 2: BL02594___alaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1201
# Identity: 875/1201 (72.9%)
# Similarity: 875/1201 (72.9%)
# Gaps: 68/1201 ( 5.7%)
# Score: 3109.5
#
#
#=======================================
BSNT_04626___ 1 ATG------ACTTCGTATTT----ATCAGACTATGTACAACAAATAAAAC 40
||| |||| .||||| |.|||.| ||.||.||.||||
BL02594___ala 1 ATGAGGACAACTT-ATATTTCAAAAGCAGCC------CAGCAGATCAAAC 43
BSNT_04626___ 41 CATCCGGCATCCGCAAATTCTTTGATTTGGCGGCAACGATGGAAGGCGTC 90
|.||.||||||||||||||.||||||.|.|||.|.||.|||||.|||||.
BL02594___ala 44 CGTCAGGCATCCGCAAATTTTTTGATCTTGCGTCCACAATGGAGGGCGTG 93
BSNT_04626___ 91 ATTTCTTTAGGCGTCGGCGAGCCTGATTTTGTTACCGCGTGGAATGTCCG 140
|||||.||.||.|||||.|||||.||||||||.||.|||||||||||..|
BL02594___ala 94 ATTTCATTGGGAGTCGGAGAGCCAGATTTTGTGACGGCGTGGAATGTAAG 143
BSNT_04626___ 141 CGAAGCAAGCATTCTCTCTCTTGAACAAGGATATACGTCATACACGGCCA 190
.|||||.|||||.||.||.|||||.||.||.||.|||||.||.|||||.|
BL02594___ala 144 GGAAGCGAGCATCCTTTCCCTTGAGCAGGGCTACACGTCTTATACGGCAA 193
BSNT_04626___ 191 ATGCGGG--TTTATACTCATTGCGGGAGGAAATCAGCCGTTATTTGAGCA 238
|.||||| ||..|.||| |||||.|.||.||||||..||||.|||..|
BL02594___ala 194 ACGCGGGTCTTCTTTCTC--TGCGGAAAGAGATCAGCGCTTATCTGAATA 241
BSNT_04626___ 239 ACAGGTTTGATC----TTA-GCTACTCGCCAGATAATGAGCTGATTGTGA 283
|..|.|||.||| ||| ||| ||.|||.|.|||||||||||.|
BL02594___ala 242 AACGTTTTCATCTGGATTATGCT-----CCTGATGACGAGCTGATTGTTA 286
BSNT_04626___ 284 CAGTGGGTGCAAGTCAGGCTTTGGATATTGCGATCCGCGCCATTGTGAAT 333
||||.||.|||||.|||||..|.|||||||||.||.|.||.||..|..||
BL02594___ala 287 CAGTCGGAGCAAGCCAGGCGCTTGATATTGCGGTCAGGGCGATCCTTGAT 336
BSNT_04626___ 334 CCAGGTGAGGAAGTCATCATTCCTGAGCCGTGTTTTGTGGCGTACGATGC 383
||.||.||.|||||..|.|||||||||||.||||||||.||.||.||.||
BL02594___ala 337 CCCGGAGAAGAAGTGCTGATTCCTGAGCCTTGTTTTGTCGCTTATGAAGC 386
BSNT_04626___ 384 GCTTGTTTCTTTGGCAGGCGGTATCCCGGTTCACGTTCATAC-AACGGCA 432
||||||.||||||||.||.||.|...||||.|||.||||||| ||| |||
BL02594___ala 387 GCTTGTCTCTTTGGCGGGGGGAAAAGCGGTCCACATTCATACGAAC-GCA 435
BSNT_04626___ 433 GACAAAGGATTTAAAGCAACGGCTGCTGATTTTGAAGCGGCAGTCACTGA 482
||....|||||||||||.|..|||||.|||||||||||.|...|.|||||
BL02594___ala 436 GAGCGCGGATTTAAAGCGAGCGCTGCAGATTTTGAAGCCGTTCTGACTGA 485
BSNT_04626___ 483 AAAAACAAAGGCCATTCTCATCTGCTCACCATCGAATCCGACAGGTTCGG 532
....||.||||||||..|..|.|||.|.||.||.|||||||||||.||.|
BL02594___ala 486 GCGTACGAAGGCCATCATTCTTTGCACCCCGTCTAATCCGACAGGCTCTG 535
BSNT_04626___ 533 TTTATTCGAAGGAAGAGCTGAATGAGATTGCTGAGTTTGCCAAAAAACAT 582
|||||||.||..||||.|||.|.|||||.||.|..||||||.|||||||.
BL02594___ala 536 TTTATTCAAAAAAAGAACTGGAAGAGATCGCGGCTTTTGCCGAAAAACAC 585
BSNT_04626___ 583 GATGTCATCGTCTTAGCCGACGAGATCTACGCGGAGCTGACATATGATGA 632
||..|.||.||..||||.||.||.||.|||||.|||||||||||.|||||
BL02594___ala 586 GACCTGATTGTAATAGCGGATGAAATTTACGCCGAGCTGACATACGATGA 635
BSNT_04626___ 633 GGAATTTACAAGTATAGCGGCATTACCGGGAATGAAGGAACGGACGGTAG 682
.|..|.||||||..|.||||.|.|..|.||||||||..|.||||||.||.
BL02594___ala 636 AGCGTATACAAGCTTTGCGGAAATCGCCGGAATGAAAAAGCGGACGATAT 685
BSNT_04626___ 683 TCATCTCAGGCTTTTCAAAAGCATTTGCAATGACGGGCTGGAGGCTCGGT 732
|.||.||.||.|||||.||||..|||||.|||||.||||||.|.|||||.
BL02594___ala 686 TGATATCGGGTTTTTCTAAAGGGTTTGCCATGACAGGCTGGCGCCTCGGA 735
BSNT_04626___ 733 TTTGCTGCGGCACCATCCTTGC-----TTCGGGATGCCATGCTTAAAATT 777
|.||..||.||.|| ||| |..||||..|.|||||.||||||
BL02594___ala 736 TATGTCGCAGCTCC-----TGCATATTTAAGGGACCCTATGCTGAAAATT 780
BSNT_04626___ 778 CATCAGTATGCGATGATGTGCGCGCC-CGCAATGGCGCAGTTTGCCGCCC 826
||.|||||..|||||||||||||||| .|| |||||.||.|||||.||..
BL02594___ala 781 CACCAGTACTCGATGATGTGCGCGCCAAGC-ATGGCTCAATTTGCGGCGG 829
BSNT_04626___ 827 TTGAAGGCCTGAAGAACGGCATGGAAGACGTAGAAAAAATGAAAAAAAGC 876
..||||.|||.||.||||||.|.||||||||.|||||.||||||||||||
BL02594___ala 830 AGGAAGCCCTTAAAAACGGCCTCGAAGACGTTGAAAAGATGAAAAAAAGC 879
BSNT_04626___ 877 TA------TCGAAGAAGACGGAATCTGTTTGTAGAATCGCTCAATGAAAT 920
|| .||||||| ||| |||||||.||.||.||.||.|||||
BL02594___ala 880 TACCGCCGCCGAAGAA-ACG-----TGTTTGTGGATTCACTGAACGAAAT 923
BSNT_04626___ 921 CGGTCTCAGCTGTCATCATCCGGGCGGCGCTTTCTATGCTTTTCCATCTA 970
|||.||...|||.|||||.|||||.||||||||.||.||.||||||||..
BL02594___ala 924 CGGGCTTGACTGCCATCAGCCGGGGGGCGCTTTTTACGCGTTTCCATCCG 973
BSNT_04626___ 971 TTAAAAGCACGGGAATGAGTTCAGAACAGTTTGCCGAGGAGCTTCTGACG 1020
||||||..|||||.|||||.|||||.||||||||.||||||||.||.| .
BL02594___ala 974 TTAAAAAAACGGGCATGAGCTCAGAGCAGTTTGCAGAGGAGCTGCTCA-T 1022
BSNT_04626___ 1021 CAG-GAAAAAGTGGCCGTTGTTCCTGGAAGTGTGTTTGGTCCGAGCGGTG 1069
||| ||||||||.|||||.||.||.||.|.|||.||.|||||||||||.|
BL02594___ala 1023 CAGCGAAAAAGTCGCCGTCGTCCCGGGCAATGTTTTCGGTCCGAGCGGCG 1072
BSNT_04626___ 1070 AGGGTTATATCCGTTGTTCATACGCAACCTCGATTGAACAGCTTCAAGAA 1119
||||.||||||.|.|||||.||.||..|||||.|||||||||||||.|||
BL02594___ala 1073 AGGGCTATATCAGATGTTCCTATGCTTCCTCGCTTGAACAGCTTCAGGAA 1122
BSNT_04626___ 1120 GCGTTAGTCAGAATGAAACGCTTCCTGCACAA---------AACAACATA 1160
||..|.|||||||||||.|||||..||.|.|| |..||.|||
BL02594___ala 1123 GCACTCGTCAGAATGAAGCGCTTTGTGGAGAAGGTCGGTGCAGTAAAATA 1172
BSNT_04626___ 1161 A 1161
|
BL02594___ala 1173 A 1173
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