Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04625 and BL02593
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04625___gspM.1.5803.seq
# -bsequence dna-align/BL02593___yugI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04625___gspM-BL02593___yugI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04625___gspM-BL02593___yugI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04625___gspM
# 2: BL02593___yugI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 319/398 (80.2%)
# Similarity: 319/398 (80.2%)
# Gaps: 13/398 ( 3.3%)
# Score: 1277.0
#
#
#=======================================
BSNT_04625___ 1 ATGGCAGCAAAATTTGAAGTGGGCAGTGTTTACACTGGTAAAGTTACAGG 50
|||.|||||||.||||||||.|||||||||||||||||||||||.||.||
BL02593___yug 1 ATGACAGCAAAGTTTGAAGTAGGCAGTGTTTACACTGGTAAAGTGACTGG 50
BSNT_04625___ 51 ATTACAAGCGTATGGTGCGTTTGTTGCATTAGATGAAGAAACTCAAGGTT 100
||||||.|||||.||.||||||||||||||||||||||||||.||.||..
BL02593___yug 51 ATTACAGGCGTACGGAGCGTTTGTTGCATTAGATGAAGAAACACAGGGAC 100
BSNT_04625___ 101 TAGTACACATTTCTGAAGTGACTCACGGTTTCGTAAAAGATATCAACGAG 150
|.||.||.|||||||||||.||.|||||||||||.|||||||||||.||
BL02593___yug 101 TCGTGCATATTTCTGAAGTAACACACGGTTTCGTTAAAGATATCAATGA- 149
BSNT_04625___ 151 CACCTTT--CAGTTGGCGACGAAGTACAAGTAAAAGTACTTGCTGTTGAT 198
||.||| |.||.||.||.||.||.|||||.||.||.|||.|.||.|||
BL02593___yug 150 -ACATTTGGCGGTCGGTGATGAGGTGCAAGTGAAGGTTCTTTCCGTAGAT 198
BSNT_04625___ 199 GAAGAAAAAGGCAAAATCAGCCTTTCAATTCGTGCGACACAAGCTGCGCC 248
||.|||||||||||||||||||||||.||.||.||.|||||.||.||.||
BL02593___yug 199 GAGGAAAAAGGCAAAATCAGCCTTTCTATCCGCGCTACACAGGCAGCTCC 248
BSNT_04625___ 249 TGAGAAAAAAGAAAGCAAACCAAGAAAACCTAAAGCTGCTCAAGTAAGCG 298
|||...||||||||||||.||.||||.||..||.||||.||||| .||
BL02593___yug 249 TGAACGAAAAGAAAGCAAGCCTAGAAGACAAAAGGCTGTTCAAG---CCG 295
BSNT_04625___ 299 AAGA---AGCTTCTACACCACAAGGTTTCAACACATTAAAAGATAAGCTT 345
|||| ||||.|| ||||||||.||||||||.||.|||||.||.|||
BL02593___yug 296 AAGATACAGCTGCT---CCACAAGGATTCAACACTTTGAAAGACAAACTT 342
BSNT_04625___ 346 GAAGAGTGGATCGAAATGTCCAACCGCAAAGACCTTATCAAAAAATAA 393
||||||||||||||...|||||||.|.|||||.|||||.||.||.|||
BL02593___yug 343 GAAGAGTGGATCGAGCAGTCCAACAGAAAAGATCTTATTAAGAAGTAA 390
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